RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 FOXD2O60548 495 aaPredicted RBP7.12□□□□□ -1.27
SRP54-207ENST00000555535 SYN1P17600 705 aa7.12□□□□□ -1.27
SRP54-207ENST00000555535 FKBP4Q02790 459 aaKnown RBP eCLIP7.12□□□□□ -1.27
SRP54-207ENST00000555535 MTMR3Q13615 1198 aa7.12□□□□□ -1.27
SRP54-207ENST00000555535 KCNB2Q92953 911 aa7.12□□□□□ -1.27
SRP54-207ENST00000555535 TMEM238LA0A1B0GVL6 79 aa7.11□□□□□ -1.27
SRP54-207ENST00000555535 FAM155AB1AL88 458 aaPredicted RBP7.11□□□□□ -1.27
SRP54-207ENST00000555535 ALPK1Q96QP1 1244 aa7.11□□□□□ -1.27
SRP54-207ENST00000555535 TMEM39AQ9NV64 488 aa7.11□□□□□ -1.27
SRP54-207ENST00000555535 CCDC87Q9NVE4 849 aa7.11□□□□□ -1.27
SRP54-207ENST00000555535 C22orf34Q6ZV56 151 aa7.1□□□□□ -1.27
SRP54-207ENST00000555535 KCT2Q8NC54 265 aa7.1□□□□□ -1.27
SRP54-207ENST00000555535 IRF2BPLQ9H1B7 796 aa7.1□□□□□ -1.27
SRP54-207ENST00000555535 CPNE3O75131 537 aaKnown RBP7.09□□□□□ -1.27
SRP54-207ENST00000555535 FAAP100Q0VG06 881 aa7.09□□□□□ -1.27
SRP54-207ENST00000555535 THAP5Q7Z6K1 395 aa7.09□□□□□ -1.27
SRP54-207ENST00000555535 PDZD3Q86UT5 571 aa7.09□□□□□ -1.27
SRP54-207ENST00000555535 HSPA12BQ96MM6 686 aa7.09□□□□□ -1.27
SRP54-207ENST00000555535 ATP13A1Q9HD20 1204 aa7.09□□□□□ -1.27
SRP54-207ENST00000555535 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
SRP54-207ENST00000555535 SEMA3GQ9NS98 782 aa7.09□□□□□ -1.27
SRP54-207ENST00000555535 EOMESO95936 686 aa7.08□□□□□ -1.28
SRP54-207ENST00000555535 ZNF157P51786 506 aaPredicted RBP7.08□□□□□ -1.28
SRP54-207ENST00000555535 NFIXQ14938 502 aa7.08□□□□□ -1.28
SRP54-207ENST00000555535 ERICH6BQ5W0A0 696 aa7.08□□□□□ -1.28
SRP54-207ENST00000555535 EMILIN2Q9BXX0 1053 aa7.08□□□□□ -1.28
SRP54-207ENST00000555535 BMP7P18075 431 aa7.07□□□□□ -1.28
SRP54-207ENST00000555535 SSFA2P28290 1259 aa7.07□□□□□ -1.28
SRP54-207ENST00000555535 USPL1Q5W0Q7 1092 aa7.07□□□□□ -1.28
SRP54-207ENST00000555535 CDC37L1Q7L3B6 337 aa7.07□□□□□ -1.28
SRP54-207ENST00000555535 MFSD4AQ8N468 514 aa7.07□□□□□ -1.28
SRP54-207ENST00000555535 PICK1Q9NRD5 415 aa7.07□□□□□ -1.28
SRP54-207ENST00000555535 PPP4R2Q9NY27 417 aa7.07□□□□□ -1.28
SRP54-207ENST00000555535 GPN3Q9UHW5 284 aaPredicted RBP7.07□□□□□ -1.28
SRP54-207ENST00000555535 FANCGO15287 622 aa7.06□□□□□ -1.28
SRP54-207ENST00000555535 XRCC5P13010 732 aaKnown RBP7.06□□□□□ -1.28
SRP54-207ENST00000555535 PDE3BQ13370 1112 aa7.06□□□□□ -1.28
SRP54-207ENST00000555535 TTC6Q86TZ1 520 aa7.06□□□□□ -1.28
SRP54-207ENST00000555535 SULF2Q8IWU5 870 aa7.06□□□□□ -1.28
SRP54-207ENST00000555535 BAHD1Q8TBE0 780 aaPredicted RBP7.06□□□□□ -1.28
SRP54-207ENST00000555535 MYLIPQ8WY64 445 aa7.06□□□□□ -1.28
SRP54-207ENST00000555535 DNAJC25Q9H1X3 360 aa7.06□□□□□ -1.28
SRP54-207ENST00000555535 GADD45BO75293 160 aaPredicted RBP7.05□□□□□ -1.28
SRP54-207ENST00000555535 ARNTP27540 789 aa7.05□□□□□ -1.28
SRP54-207ENST00000555535 TCERG1LQ5VWI1 586 aa7.05□□□□□ -1.28
SRP54-207ENST00000555535 TMEM151BQ8IW70 566 aa7.05□□□□□ -1.28
SRP54-207ENST00000555535 CXorf38Q8TB03 319 aa7.05□□□□□ -1.28
SRP54-207ENST00000555535 ACSBG1Q96GR2 724 aa7.05□□□□□ -1.28
SRP54-207ENST00000555535 RTEL1Q9NZ71 1219 aa7.05□□□□□ -1.28
SRP54-207ENST00000555535 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
SRP54-207ENST00000555535 A0A0G2JLL6 359 aaPredicted RBP7.04□□□□□ -1.28
SRP54-207ENST00000555535 SEMA7AO75326 666 aa7.04□□□□□ -1.28
SRP54-207ENST00000555535 LRIG2O94898 1065 aa7.04□□□□□ -1.28
SRP54-207ENST00000555535 SFRP5Q5T4F7 317 aa7.04□□□□□ -1.28
SRP54-207ENST00000555535 CDKAL1Q5VV42 579 aa7.04□□□□□ -1.28
SRP54-207ENST00000555535 ZNF746Q6NUN9 644 aaPredicted RBP7.04□□□□□ -1.28
SRP54-207ENST00000555535 DTHD1Q6ZMT9 781 aa7.04□□□□□ -1.28
SRP54-207ENST00000555535 KCNC2Q96PR1 638 aa7.04□□□□□ -1.28
SRP54-207ENST00000555535 KRTAP9-8Q9BYQ0 159 aa7.04□□□□□ -1.28
SRP54-207ENST00000555535 SLAMF8Q9P0V8 285 aa7.04□□□□□ -1.28
SRP54-207ENST00000555535 H3BS24 57 aa7.03□□□□□ -1.28
SRP54-207ENST00000555535 ZNF385BQ569K4 471 aa7.03□□□□□ -1.28
SRP54-207ENST00000555535 MAP1SQ66K74 1059 aaPredicted RBP7.03□□□□□ -1.28
SRP54-207ENST00000555535 CCDC74AQ96AQ1 378 aa7.03□□□□□ -1.28
SRP54-207ENST00000555535 COX4I2Q96KJ9 171 aa7.03□□□□□ -1.28
SRP54-207ENST00000555535 KCNK12Q9HB15 430 aa7.03□□□□□ -1.28
SRP54-207ENST00000555535 TPX2Q9ULW0 747 aaKnown RBP7.03□□□□□ -1.28
SRP54-207ENST00000555535 RFXAPO00287 272 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 PEX10O60683 326 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 NME2P22392 152 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 NTF4P34130 210 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 PPM1JQ5JR12 505 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 ARMCX6Q7L4S7 300 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 IRF2BP1Q8IU81 584 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 GPBAR1Q8TDU6 330 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 TMEM59LQ9UK28 342 aa7.02□□□□□ -1.29
SRP54-207ENST00000555535 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 HPXP02790 462 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 DLG4P78352 724 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 RING1Q06587 406 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 TMPRSS7Q7RTY8 843 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 MARCH10Q8NA82 808 aaPredicted RBP7.01□□□□□ -1.29
SRP54-207ENST00000555535 SLC6A17Q9H1V8 727 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 CACNA2D2Q9NY47 1150 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 ST14Q9Y5Y6 855 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 CAPN6Q9Y6Q1 641 aa7.01□□□□□ -1.29
SRP54-207ENST00000555535 NDUFB5O43674 189 aa7□□□□□ -1.29
SRP54-207ENST00000555535 ABL1P00519 1130 aa7□□□□□ -1.29
SRP54-207ENST00000555535 ZNF252P-AS1Q0IIN9 211 aa7□□□□□ -1.29
SRP54-207ENST00000555535 GRM2Q14416 872 aa7□□□□□ -1.29
SRP54-207ENST00000555535 ZBTB37Q5TC79 503 aa7□□□□□ -1.29
SRP54-207ENST00000555535 PRRT2Q7Z6L0 340 aaPredicted RBP7□□□□□ -1.29
SRP54-207ENST00000555535 ZNF507Q8TCN5 953 aa7□□□□□ -1.29
SRP54-207ENST00000555535 CITED4Q96RK1 184 aa7□□□□□ -1.29
SRP54-207ENST00000555535 CNOT6Q9ULM6 557 aaKnown RBP7□□□□□ -1.29
SRP54-207ENST00000555535 SAMM50Q9Y512 469 aa7□□□□□ -1.29
SRP54-207ENST00000555535 ORC1Q13415 861 aa6.99□□□□□ -1.29
SRP54-207ENST00000555535 SCARA3Q6AZY7 606 aa6.99□□□□□ -1.29
SRP54-207ENST00000555535 UBE2FQ969M7 185 aa6.99□□□□□ -1.29
SRP54-207ENST00000555535 PRR33A8MZF0 331 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms