RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 SEMA3EO15041 775 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 LINC00301Q8NCQ3 95 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 ZNF384Q8TF68 577 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 ZNF213O14771 459 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 PRKAB2O43741 272 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 CRAMP1Q96RY5 1269 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 BRIP1Q9BX63 1249 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 NBPF3Q9H094 633 aa27.43■■□□□ 1.98
STRN3-207ENST00000555358 EPB41L4AQ9HCS5 686 aaPredicted RBP27.43■■□□□ 1.98
STRN3-207ENST00000555358 A0A1B0GVL5 298 aa27.42■■□□□ 1.98
STRN3-207ENST00000555358 SPDYE4A6NLX3 237 aa27.42■■□□□ 1.98
STRN3-207ENST00000555358 BBOX1O75936 387 aa27.42■■□□□ 1.98
STRN3-207ENST00000555358 NDUFA8P51970 172 aa27.41■■□□□ 1.98
STRN3-207ENST00000555358 OTUD7BQ6GQQ9 843 aa27.41■■□□□ 1.98
STRN3-207ENST00000555358 FILIP1Q7Z7B0 1213 aa27.41■■□□□ 1.98
STRN3-207ENST00000555358 NAT10Q9H0A0 1025 aaKnown RBP27.41■■□□□ 1.98
STRN3-207ENST00000555358 PARP3Q9Y6F1 533 aa27.41■■□□□ 1.98
STRN3-207ENST00000555358 SLC15A2Q16348 729 aa27.41■■□□□ 1.98
STRN3-207ENST00000555358 CLIC4Q9Y696 253 aa27.41■■□□□ 1.98
STRN3-207ENST00000555358 PATL2C9JE40 543 aaKnown RBP27.4■■□□□ 1.98
STRN3-207ENST00000555358 NAA30Q147X3 362 aaPredicted RBP27.4■■□□□ 1.98
STRN3-207ENST00000555358 NBPF11Q86T75 865 aa27.4■■□□□ 1.98
STRN3-207ENST00000555358 GSG1L2A8MUP6 293 aa27.4■■□□□ 1.98
STRN3-207ENST00000555358 UFL1O94874 794 aa27.4■■□□□ 1.98
STRN3-207ENST00000555358 IFNL3Q8IZI9 196 aa27.4■■□□□ 1.98
STRN3-207ENST00000555358 KCND1Q9NSA2 647 aa27.4■■□□□ 1.98
STRN3-207ENST00000555358 HPS5Q9UPZ3 1129 aa27.4■■□□□ 1.98
STRN3-207ENST00000555358 MB21D2Q8IYB1 491 aaPredicted RBP27.39■■□□□ 1.98
STRN3-207ENST00000555358 SDF4Q9BRK5 362 aa27.39■■□□□ 1.98
STRN3-207ENST00000555358 POLR3EQ9NVU0 708 aa27.39■■□□□ 1.98
STRN3-207ENST00000555358 COL11A2P13942 1736 aaPredicted RBP27.39■■□□□ 1.97
STRN3-207ENST00000555358 YEATS4O95619 227 aa27.39■■□□□ 1.97
STRN3-207ENST00000555358 SRGNP10124 158 aa27.39■■□□□ 1.97
STRN3-207ENST00000555358 PRDX5P30044 214 aa27.39■■□□□ 1.97
STRN3-207ENST00000555358 TBC1D10CQ8IV04 446 aa27.39■■□□□ 1.97
STRN3-207ENST00000555358 C8orf76Q96K31 380 aa27.39■■□□□ 1.97
STRN3-207ENST00000555358 FEZ1Q99689 392 aa27.39■■□□□ 1.97
STRN3-207ENST00000555358 KIAA1468Q9P260 1216 aa27.39■■□□□ 1.97
STRN3-207ENST00000555358 PDS5AQ29RF7 1337 aaKnown RBP27.38■■□□□ 1.97
STRN3-207ENST00000555358 FBXO18Q8NFZ0 1043 aa27.38■■□□□ 1.97
STRN3-207ENST00000555358 KCNG4Q8TDN1 519 aa27.38■■□□□ 1.97
STRN3-207ENST00000555358 BPIFA3Q9BQP9 254 aa27.38■■□□□ 1.97
STRN3-207ENST00000555358 OSBPL5Q9H0X9 879 aaPredicted RBP27.38■■□□□ 1.97
STRN3-207ENST00000555358 SLC4A4Q9Y6R1 1079 aa27.38■■□□□ 1.97
STRN3-207ENST00000555358 STK38Q15208 465 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 PTPN14Q15678 1187 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 DPCR1Q3MIW9 517 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 CCAR2Q8N163 923 aaKnown RBP27.37■■□□□ 1.97
STRN3-207ENST00000555358 NKX2-3Q8TAU0 364 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 ZNF592Q92610 1267 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 FBXW7Q969H0 707 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 GGA1Q9UJY5 639 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 PRC1O43663 620 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 ALX1Q15699 326 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 NSUN4Q96CB9 384 aaKnown RBP27.37■■□□□ 1.97
STRN3-207ENST00000555358 POLLQ9UGP5 575 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 LRRC37AA6NMS7 1700 aa27.37■■□□□ 1.97
STRN3-207ENST00000555358 PPEF1O14829 653 aaPredicted RBP27.36■■□□□ 1.97
STRN3-207ENST00000555358 POLR3DP05423 398 aaPredicted RBP27.36■■□□□ 1.97
STRN3-207ENST00000555358 ANTXR2P58335 489 aa27.36■■□□□ 1.97
STRN3-207ENST00000555358 MECOMQ03112 1051 aa27.36■■□□□ 1.97
STRN3-207ENST00000555358 MYSM1Q5VVJ2 828 aa27.36■■□□□ 1.97
STRN3-207ENST00000555358 NAPBQ9H115 298 aa27.36■■□□□ 1.97
STRN3-207ENST00000555358 KLF18A0A0U1RQI7 1052 aa27.36■■□□□ 1.97
STRN3-207ENST00000555358 ATP2B4P23634 1241 aa27.36■■□□□ 1.97
STRN3-207ENST00000555358 GSDMDP57764 484 aa27.36■■□□□ 1.97
STRN3-207ENST00000555358 DYNLL1P63167 89 aaKnown RBP27.36■■□□□ 1.97
STRN3-207ENST00000555358 DEFB132Q7Z7B7 95 aa27.36■■□□□ 1.97
STRN3-207ENST00000555358 RIOK1Q9BRS2 568 aaKnown RBP27.36■■□□□ 1.97
STRN3-207ENST00000555358 CCDC88AQ3V6T2 1871 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 MAGEB6P1A0A0J9YX57 407 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 SPTLC2O15270 562 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 OLFM4Q6UX06 510 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 BRAPQ7Z569 592 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 STK32BQ9NY57 414 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 CGNQ9P2M7 1197 aaKnown RBP27.35■■□□□ 1.97
STRN3-207ENST00000555358 ORC3Q9UBD5 711 aaPredicted RBP27.35■■□□□ 1.97
STRN3-207ENST00000555358 CHD4Q14839 1912 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 GOLGA8BA8MQT2 603 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 DHX16O60231 1041 aaKnown RBP27.35■■□□□ 1.97
STRN3-207ENST00000555358 SF3A1Q15459 793 aaKnown RBP27.35■■□□□ 1.97
STRN3-207ENST00000555358 C15orf52Q6ZUT6 534 aaKnown RBP27.35■■□□□ 1.97
STRN3-207ENST00000555358 ZNF804AQ7Z570 1209 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 NCOA7Q8NI08 942 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 TBC1D16Q8TBP0 767 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 SDR42E1Q8WUS8 393 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 GTPBP4Q9BZE4 634 aaKnown RBP27.35■■□□□ 1.97
STRN3-207ENST00000555358 INCENPQ9NQS7 918 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 PODXL2Q9NZ53 605 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 IMPACTQ9P2X3 320 aa27.35■■□□□ 1.97
STRN3-207ENST00000555358 LTBP1Q14766 1721 aa27.34■■□□□ 1.97
STRN3-207ENST00000555358 KIF28PB7ZC32 967 aa27.34■■□□□ 1.97
STRN3-207ENST00000555358 GJB4Q9NTQ9 266 aa27.34■■□□□ 1.97
STRN3-207ENST00000555358 ZMYM6O95789 1325 aa27.34■■□□□ 1.97
STRN3-207ENST00000555358 NPR1P16066 1061 aa27.33■■□□□ 1.97
STRN3-207ENST00000555358 GNAT2P19087 354 aa27.33■■□□□ 1.97
STRN3-207ENST00000555358 PDE6BP35913 854 aa27.33■■□□□ 1.97
STRN3-207ENST00000555358 CTDSPL2Q05D32 466 aa27.33■■□□□ 1.97
STRN3-207ENST00000555358 RALYLQ86SE5 291 aaKnown RBP27.33■■□□□ 1.97
STRN3-207ENST00000555358 SP8Q8IXZ3 490 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms