RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 OS9Q13438 667 aaPredicted RBP27.34■■□□□ 1.97
GABRB3-206ENST00000554556 TTC39AQ5SRH9 613 aa27.34■■□□□ 1.97
GABRB3-206ENST00000554556 SHISA4Q96DD7 197 aa27.34■■□□□ 1.97
GABRB3-206ENST00000554556 HERC5Q9UII4 1024 aaKnown RBP27.34■■□□□ 1.97
GABRB3-206ENST00000554556 ADCY3O60266 1144 aa27.33■■□□□ 1.97
GABRB3-206ENST00000554556 PLCG2P16885 1265 aa27.33■■□□□ 1.97
GABRB3-206ENST00000554556 FLT3LGP49771 235 aa27.33■■□□□ 1.97
GABRB3-206ENST00000554556 SPP2Q13103 211 aa27.33■■□□□ 1.97
GABRB3-206ENST00000554556 PABPC4Q13310 644 aaKnown RBP eCLIP27.33■■□□□ 1.97
GABRB3-206ENST00000554556 NAA16Q6N069 864 aaPredicted RBP27.33■■□□□ 1.97
GABRB3-206ENST00000554556 CCDC84Q86UT8 332 aaPredicted RBP27.33■■□□□ 1.97
GABRB3-206ENST00000554556 TMEM57Q8N5G2 664 aa27.33■■□□□ 1.97
GABRB3-206ENST00000554556 ZNF280CQ8ND82 737 aa27.33■■□□□ 1.97
GABRB3-206ENST00000554556 DPF3Q92784 378 aa27.33■■□□□ 1.97
GABRB3-206ENST00000554556 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.33■■□□□ 1.97
GABRB3-206ENST00000554556 CAP2P40123 477 aa27.32■■□□□ 1.96
GABRB3-206ENST00000554556 IRF5Q13568 498 aa27.32■■□□□ 1.96
GABRB3-206ENST00000554556 PXYLP1Q8TE99 480 aa27.32■■□□□ 1.96
GABRB3-206ENST00000554556 COA7Q96BR5 231 aa27.32■■□□□ 1.96
GABRB3-206ENST00000554556 HTATIP2Q9BUP3 242 aa27.32■■□□□ 1.96
GABRB3-206ENST00000554556 DHX36Q9H2U1 1008 aaKnown RBP27.32■■□□□ 1.96
GABRB3-206ENST00000554556 PI4KBQ9UBF8 816 aa27.32■■□□□ 1.96
GABRB3-206ENST00000554556 ATAD5Q96QE3 1844 aa27.32■■□□□ 1.96
GABRB3-206ENST00000554556 USP17L5A8MUK1 530 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 H0YGN5 161 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 IGSF3O75054 1194 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 CAPN2P17655 700 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 ATP8B2P98198 1209 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 POLA2Q14181 598 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 TNNI3KQ59H18 835 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 ANKRD13CQ8N6S4 541 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 SH3RF3Q8TEJ3 882 aaPredicted RBP27.31■■□□□ 1.96
GABRB3-206ENST00000554556 AS3MTQ9HBK9 375 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 COLQQ9Y215 455 aaPredicted RBP27.31■■□□□ 1.96
GABRB3-206ENST00000554556 FPGT-TNNI3KV9GXZ4 949 aa27.31■■□□□ 1.96
GABRB3-206ENST00000554556 GCLCP48506 637 aaPredicted RBP27.3■■□□□ 1.96
GABRB3-206ENST00000554556 TREML2Q5T2D2 321 aa27.3■■□□□ 1.96
GABRB3-206ENST00000554556 SSH3Q8TE77 659 aa27.3■■□□□ 1.96
GABRB3-206ENST00000554556 SNRKQ9NRH2 765 aa27.3■■□□□ 1.96
GABRB3-206ENST00000554556 SURF6O75683 361 aaKnown RBP27.29■■□□□ 1.96
GABRB3-206ENST00000554556 FAM110CQ1W6H9 321 aa27.29■■□□□ 1.96
GABRB3-206ENST00000554556 UNC93B1Q9H1C4 597 aa27.29■■□□□ 1.96
GABRB3-206ENST00000554556 AATFQ9NY61 560 aaKnown RBP eCLIP27.29■■□□□ 1.96
GABRB3-206ENST00000554556 DOCK3Q8IZD9 2030 aa27.29■■□□□ 1.96
GABRB3-206ENST00000554556 PPP4CP60510 307 aa27.28■■□□□ 1.96
GABRB3-206ENST00000554556 U2AF1L4Q8WU68 220 aaKnown RBP27.28■■□□□ 1.96
GABRB3-206ENST00000554556 DBNDD2Q9BQY9 259 aa27.28■■□□□ 1.96
GABRB3-206ENST00000554556 BRCA2P51587 3418 aa27.28■■□□□ 1.96
GABRB3-206ENST00000554556 SGPL1O95470 568 aa27.27■■□□□ 1.96
GABRB3-206ENST00000554556 HMGCS2P54868 508 aa27.27■■□□□ 1.96
GABRB3-206ENST00000554556 FOXP4Q8IVH2 680 aaPredicted RBP27.27■■□□□ 1.96
GABRB3-206ENST00000554556 FTSJ3Q8IY81 847 aaKnown RBP27.27■■□□□ 1.96
GABRB3-206ENST00000554556 ZNF512BQ96KM6 892 aaPredicted RBP27.27■■□□□ 1.96
GABRB3-206ENST00000554556 INHAP05111 366 aa27.26■■□□□ 1.95
GABRB3-206ENST00000554556 ELNP15502 786 aa27.26■■□□□ 1.95
GABRB3-206ENST00000554556 FXR1P51114 621 aaKnown RBP eCLIP27.26■■□□□ 1.95
GABRB3-206ENST00000554556 SH3D19Q5HYK7 790 aa27.26■■□□□ 1.95
GABRB3-206ENST00000554556 UBE2Q1Q7Z7E8 422 aa27.26■■□□□ 1.95
GABRB3-206ENST00000554556 TGFBRAP1Q8WUH2 860 aa27.26■■□□□ 1.95
GABRB3-206ENST00000554556 TRIM34Q9BYJ4 488 aa27.26■■□□□ 1.95
GABRB3-206ENST00000554556 TAOK2Q9UL54 1235 aa27.26■■□□□ 1.95
GABRB3-206ENST00000554556 LOC285556D6RIA3 1793 aa27.26■■□□□ 1.95
GABRB3-206ENST00000554556 MAST2Q6P0Q8 1798 aa27.25■■□□□ 1.95
GABRB3-206ENST00000554556 ASNSP08243 561 aa27.25■■□□□ 1.95
GABRB3-206ENST00000554556 WDR18Q9BV38 432 aa27.25■■□□□ 1.95
GABRB3-206ENST00000554556 FARP2O94887 1054 aaPredicted RBP27.24■■□□□ 1.95
GABRB3-206ENST00000554556 CYP2E1P05181 493 aaPredicted RBP27.24■■□□□ 1.95
GABRB3-206ENST00000554556 RRP1BQ14684 758 aaKnown RBP27.24■■□□□ 1.95
GABRB3-206ENST00000554556 CRACR2BQ8N4Y2 399 aaPredicted RBP27.24■■□□□ 1.95
GABRB3-206ENST00000554556 ASCC2Q9H1I8 757 aaPredicted RBP27.24■■□□□ 1.95
GABRB3-206ENST00000554556 GINM1Q9NU53 330 aa27.24■■□□□ 1.95
GABRB3-206ENST00000554556 NOP58Q9Y2X3 529 aaKnown RBP27.24■■□□□ 1.95
GABRB3-206ENST00000554556 NR2E3Q9Y5X4 410 aa27.24■■□□□ 1.95
GABRB3-206ENST00000554556 TFRCP02786 760 aaKnown RBP27.23■■□□□ 1.95
GABRB3-206ENST00000554556 MAPKAPK5Q8IW41 473 aa27.23■■□□□ 1.95
GABRB3-206ENST00000554556 TMOD4Q9NZQ9 345 aa27.23■■□□□ 1.95
GABRB3-206ENST00000554556 CDK5RAP2Q96SN8 1893 aa27.22■■□□□ 1.95
GABRB3-206ENST00000554556 ZAP70P43403 619 aa27.22■■□□□ 1.95
GABRB3-206ENST00000554556 ITPRIPQ8IWB1 547 aa27.22■■□□□ 1.95
GABRB3-206ENST00000554556 MYO5AQ9Y4I1 1855 aaKnown RBP27.21■■□□□ 1.95
GABRB3-206ENST00000554556 FLT1P17948 1338 aa27.21■■□□□ 1.95
GABRB3-206ENST00000554556 FOCADQ5VW36 1801 aa27.21■■□□□ 1.95
GABRB3-206ENST00000554556 C19orf81C9J6K1 198 aa27.21■■□□□ 1.95
GABRB3-206ENST00000554556 BACE1P56817 501 aa27.21■■□□□ 1.95
GABRB3-206ENST00000554556 IRX3P78415 501 aaPredicted RBP27.21■■□□□ 1.95
GABRB3-206ENST00000554556 METTL16Q86W50 562 aaKnown RBP27.21■■□□□ 1.95
GABRB3-206ENST00000554556 DEFB118Q96PH6 123 aa27.21■■□□□ 1.95
GABRB3-206ENST00000554556 C1orf115Q9H7X2 142 aa27.21■■□□□ 1.95
GABRB3-206ENST00000554556 ZBTB7BO15156 539 aaPredicted RBP27.2■■□□□ 1.94
GABRB3-206ENST00000554556 HLA-DOAP06340 250 aa27.2■■□□□ 1.94
GABRB3-206ENST00000554556 CHRDL2Q6WN34 429 aa27.2■■□□□ 1.94
GABRB3-206ENST00000554556 CERS3Q8IU89 383 aa27.2■■□□□ 1.94
GABRB3-206ENST00000554556 PALD1Q9ULE6 856 aa27.2■■□□□ 1.94
GABRB3-206ENST00000554556 SIPA1L1O43166 1804 aa27.2■■□□□ 1.94
GABRB3-206ENST00000554556 HNRNPUQ00839 825 aaKnown RBP eCLIP27.19■■□□□ 1.94
GABRB3-206ENST00000554556 MTMR2Q13614 643 aa27.19■■□□□ 1.94
GABRB3-206ENST00000554556 ADGRA1Q86SQ6 560 aa27.19■■□□□ 1.94
GABRB3-206ENST00000554556 PAK6Q9NQU5 681 aaPredicted RBP27.19■■□□□ 1.94
GABRB3-206ENST00000554556 DBNLQ9UJU6 430 aaKnown RBP27.19■■□□□ 1.94
GABRB3-206ENST00000554556 CYP7A1P22680 504 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms