RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 PABPC4Q13310 644 aaKnown RBP eCLIP21.22■□□□□ 0.99
NEK9-204ENST00000554258 CAVIN4Q5BKX8 364 aa21.22■□□□□ 0.99
NEK9-204ENST00000554258 ALYREFQ86V81 257 aaKnown RBP21.22■□□□□ 0.99
NEK9-204ENST00000554258 PROCA1Q8NCQ7 364 aaPredicted RBP21.22■□□□□ 0.99
NEK9-204ENST00000554258 GAS2L1Q99501 681 aaPredicted RBP21.22■□□□□ 0.99
NEK9-204ENST00000554258 LRFN3Q9BTN0 628 aa21.22■□□□□ 0.99
NEK9-204ENST00000554258 ATRNL1Q5VV63 1379 aa21.22■□□□□ 0.99
NEK9-204ENST00000554258 MYH13Q9UKX3 1938 aa21.21■□□□□ 0.99
NEK9-204ENST00000554258 DNAJB2P25686 324 aa21.21■□□□□ 0.99
NEK9-204ENST00000554258 CCDC84Q86UT8 332 aaPredicted RBP21.21■□□□□ 0.99
NEK9-204ENST00000554258 WWC1Q8IX03 1113 aa21.21■□□□□ 0.99
NEK9-204ENST00000554258 LINS1Q8NG48 757 aa21.21■□□□□ 0.99
NEK9-204ENST00000554258 ZNF576Q9H609 170 aa21.21■□□□□ 0.99
NEK9-204ENST00000554258 SPINK5Q9NQ38 1064 aaPredicted RBP21.21■□□□□ 0.99
NEK9-204ENST00000554258 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.21■□□□□ 0.99
NEK9-204ENST00000554258 CTNND1O60716 968 aaKnown RBP21.2■□□□□ 0.98
NEK9-204ENST00000554258 CCL14Q16627 93 aa21.2■□□□□ 0.98
NEK9-204ENST00000554258 POTEEQ6S8J3 1075 aa21.2■□□□□ 0.98
NEK9-204ENST00000554258 G2E3Q7L622 706 aa21.2■□□□□ 0.98
NEK9-204ENST00000554258 ZFPM1Q8IX07 1006 aa21.2■□□□□ 0.98
NEK9-204ENST00000554258 NECAB3Q96P71 396 aaPredicted RBP21.2■□□□□ 0.98
NEK9-204ENST00000554258 ASCC2Q9H1I8 757 aaPredicted RBP21.2■□□□□ 0.98
NEK9-204ENST00000554258 MORF4L1Q9UBU8 362 aa21.2■□□□□ 0.98
NEK9-204ENST00000554258 DAGLAQ9Y4D2 1042 aa21.2■□□□□ 0.98
NEK9-204ENST00000554258 ZNF521Q96K83 1311 aa21.2■□□□□ 0.98
NEK9-204ENST00000554258 AKNAD1Q5T1N1 836 aa21.19■□□□□ 0.98
NEK9-204ENST00000554258 XIRP2A4UGR9 3374 aa21.19■□□□□ 0.98
NEK9-204ENST00000554258 DNM1LO00429 736 aa21.18■□□□□ 0.98
NEK9-204ENST00000554258 RGS2P41220 211 aa21.18■□□□□ 0.98
NEK9-204ENST00000554258 ZSCAN29Q8IWY8 852 aaPredicted RBP21.18■□□□□ 0.98
NEK9-204ENST00000554258 USP40Q9NVE5 1235 aa21.18■□□□□ 0.98
NEK9-204ENST00000554258 WDR63Q8IWG1 891 aa21.17■□□□□ 0.98
NEK9-204ENST00000554258 TSPYL6Q8N831 410 aa21.17■□□□□ 0.98
NEK9-204ENST00000554258 DNAAF4Q8WXU2 420 aa21.17■□□□□ 0.98
NEK9-204ENST00000554258 CACNA1AO00555 2505 aa21.17■□□□□ 0.98
NEK9-204ENST00000554258 HMGCS2P54868 508 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 CALD1Q05682 793 aaKnown RBP21.16■□□□□ 0.98
NEK9-204ENST00000554258 SPP2Q13103 211 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 DIXDC1Q155Q3 683 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 CCDC85BQ15834 202 aaPredicted RBP21.16■□□□□ 0.98
NEK9-204ENST00000554258 EPHA10Q5JZY3 1008 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 LPAR1Q92633 364 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 TIFAQ96CG3 184 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 APBA2Q99767 749 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 PUS3Q9BZE2 481 aaKnown RBP21.16■□□□□ 0.98
NEK9-204ENST00000554258 PDLIM7Q9NR12 457 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 REV3LO60673 3130 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 CHD9Q3L8U1 2897 aa21.16■□□□□ 0.98
NEK9-204ENST00000554258 IL16Q14005 1332 aa21.15■□□□□ 0.98
NEK9-204ENST00000554258 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.15■□□□□ 0.98
NEK9-204ENST00000554258 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.15■□□□□ 0.98
NEK9-204ENST00000554258 MSCO60682 206 aa21.15■□□□□ 0.98
NEK9-204ENST00000554258 SLC39A5Q6ZMH5 540 aa21.15■□□□□ 0.98
NEK9-204ENST00000554258 CCAR1Q8IX12 1150 aaKnown RBP21.15■□□□□ 0.98
NEK9-204ENST00000554258 USP6NLQ92738 828 aa21.15■□□□□ 0.98
NEK9-204ENST00000554258 DDX20Q9UHI6 824 aaKnown RBP21.15■□□□□ 0.98
NEK9-204ENST00000554258 MROH5Q6ZUA9 1318 aa21.14■□□□□ 0.97
NEK9-204ENST00000554258 SLC4A2P04920 1241 aa21.14■□□□□ 0.97
NEK9-204ENST00000554258 CNGA1P29973 690 aa21.14■□□□□ 0.97
NEK9-204ENST00000554258 MAPK4P31152 587 aa21.14■□□□□ 0.97
NEK9-204ENST00000554258 RGS3P49796 1198 aa21.14■□□□□ 0.97
NEK9-204ENST00000554258 HNRNPUQ00839 825 aaKnown RBP eCLIP21.14■□□□□ 0.97
NEK9-204ENST00000554258 TRIM60Q495X7 471 aa21.14■□□□□ 0.97
NEK9-204ENST00000554258 TMEM31Q5JXX7 168 aa21.14■□□□□ 0.97
NEK9-204ENST00000554258 GPRC5AQ8NFJ5 357 aa21.14■□□□□ 0.97
NEK9-204ENST00000554258 SALL2Q9Y467 1007 aaPredicted RBP21.14■□□□□ 0.97
NEK9-204ENST00000554258 ATAD5Q96QE3 1844 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 TRIM43BA6NCK2 446 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 PEX10O60683 326 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 SLURP2P0DP57 97 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 IRX3P78415 501 aaPredicted RBP21.13■□□□□ 0.97
NEK9-204ENST00000554258 MAP3K10Q02779 954 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 FKBP5Q13451 457 aaPredicted RBP21.13■□□□□ 0.97
NEK9-204ENST00000554258 MFSD14CQ5VZR4 134 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 SH3RF1Q7Z6J0 888 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 TRIM43Q96BQ3 446 aaPredicted RBP21.13■□□□□ 0.97
NEK9-204ENST00000554258 PRDM12Q9H4Q4 367 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 EPHX3Q9H6B9 360 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 PLXNA1Q9UIW2 1896 aa21.13■□□□□ 0.97
NEK9-204ENST00000554258 ENTPD3O75355 529 aa21.12■□□□□ 0.97
NEK9-204ENST00000554258 FLIIQ13045 1269 aa21.12■□□□□ 0.97
NEK9-204ENST00000554258 GJC2Q5T442 439 aaPredicted RBP21.12■□□□□ 0.97
NEK9-204ENST00000554258 SH3BP5LQ7L8J4 393 aa21.12■□□□□ 0.97
NEK9-204ENST00000554258 ZNF280CQ8ND82 737 aa21.12■□□□□ 0.97
NEK9-204ENST00000554258 WDR66Q8TBY9 1149 aa21.12■□□□□ 0.97
NEK9-204ENST00000554258 EPHB4P54760 987 aa21.11■□□□□ 0.97
NEK9-204ENST00000554258 MORN1Q5T089 497 aa21.11■□□□□ 0.97
NEK9-204ENST00000554258 TXNRD2Q9NNW7 524 aa21.11■□□□□ 0.97
NEK9-204ENST00000554258 MYH2Q9UKX2 1941 aa21.1■□□□□ 0.97
NEK9-204ENST00000554258 KBTBD13C9JR72 458 aa21.1■□□□□ 0.97
NEK9-204ENST00000554258 BMP1P13497 986 aa21.1■□□□□ 0.97
NEK9-204ENST00000554258 GPR142Q7Z601 462 aa21.1■□□□□ 0.97
NEK9-204ENST00000554258 PLEKHH3Q7Z736 793 aa21.1■□□□□ 0.97
NEK9-204ENST00000554258 ARRDC4Q8NCT1 418 aa21.1■□□□□ 0.97
NEK9-204ENST00000554258 TSPYL2Q9H2G4 693 aaPredicted RBP21.1■□□□□ 0.97
NEK9-204ENST00000554258 CWC22Q9HCG8 908 aaKnown RBP21.1■□□□□ 0.97
NEK9-204ENST00000554258 CACNA1FO60840 1977 aa21.1■□□□□ 0.97
NEK9-204ENST00000554258 ZBED9Q6R2W3 1325 aa21.09■□□□□ 0.97
NEK9-204ENST00000554258 DDTLA6NHG4 134 aaPredicted RBP21.09■□□□□ 0.97
NEK9-204ENST00000554258 IGFBP4P22692 258 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms