RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PNMA3Q9UL41 463 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 ZMYND8Q9ULU4 1186 aaPredicted RBP9.59□□□□□ -0.87
ABCD4-220ENST00000553998 LRRFIP2Q9Y608 721 aaKnown RBP9.59□□□□□ -0.87
ABCD4-220ENST00000553998 DDTLA6NHG4 134 aaPredicted RBP9.58□□□□□ -0.88
ABCD4-220ENST00000553998 TRIM27P14373 513 aa9.58□□□□□ -0.88
ABCD4-220ENST00000553998 TREML2Q5T2D2 321 aa9.58□□□□□ -0.88
ABCD4-220ENST00000553998 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
ABCD4-220ENST00000553998 USP44Q9H0E7 712 aa9.58□□□□□ -0.88
ABCD4-220ENST00000553998 MORF4L1Q9UBU8 362 aa9.58□□□□□ -0.88
ABCD4-220ENST00000553998 DENND2AQ9ULE3 1009 aa9.58□□□□□ -0.88
ABCD4-220ENST00000553998 LAMA2P24043 3122 aaKnown RBP9.58□□□□□ -0.88
ABCD4-220ENST00000553998 PFASO15067 1338 aa9.57□□□□□ -0.88
ABCD4-220ENST00000553998 TRIM75PA6NK02 468 aa9.57□□□□□ -0.88
ABCD4-220ENST00000553998 XRCC5P13010 732 aaKnown RBP9.57□□□□□ -0.88
ABCD4-220ENST00000553998 SYN1P17600 705 aa9.57□□□□□ -0.88
ABCD4-220ENST00000553998 TRIM32Q13049 653 aa9.57□□□□□ -0.88
ABCD4-220ENST00000553998 SH3D19Q5HYK7 790 aa9.57□□□□□ -0.88
ABCD4-220ENST00000553998 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.57□□□□□ -0.88
ABCD4-220ENST00000553998 UBE2OQ9C0C9 1292 aaKnown RBP9.57□□□□□ -0.88
ABCD4-220ENST00000553998 OSBPL5Q9H0X9 879 aaPredicted RBP9.57□□□□□ -0.88
ABCD4-220ENST00000553998 DDX4Q9NQI0 724 aaKnown RBP9.57□□□□□ -0.88
ABCD4-220ENST00000553998 GNL3LQ9NVN8 582 aaKnown RBP9.57□□□□□ -0.88
ABCD4-220ENST00000553998 MUC3AQ02505 3323 aa9.57□□□□□ -0.88
ABCD4-220ENST00000553998 PDS5AQ29RF7 1337 aaKnown RBP9.56□□□□□ -0.88
ABCD4-220ENST00000553998 COL2A1P02458 1487 aaPredicted RBP9.56□□□□□ -0.88
ABCD4-220ENST00000553998 CIAO1O76071 339 aa9.56□□□□□ -0.88
ABCD4-220ENST00000553998 MAP4K4O95819 1239 aaPredicted RBP9.56□□□□□ -0.88
ABCD4-220ENST00000553998 SLURP2P0DP57 97 aa9.56□□□□□ -0.88
ABCD4-220ENST00000553998 PABPC4Q13310 644 aaKnown RBP eCLIP9.56□□□□□ -0.88
ABCD4-220ENST00000553998 LHX8Q68G74 356 aa9.56□□□□□ -0.88
ABCD4-220ENST00000553998 FTSJ3Q8IY81 847 aaKnown RBP9.56□□□□□ -0.88
ABCD4-220ENST00000553998 ZGPATQ8N5A5 531 aaKnown RBP9.56□□□□□ -0.88
ABCD4-220ENST00000553998 ZNF280CQ8ND82 737 aa9.56□□□□□ -0.88
ABCD4-220ENST00000553998 TRIB2Q92519 343 aa9.56□□□□□ -0.88
ABCD4-220ENST00000553998 USP6NLQ92738 828 aa9.56□□□□□ -0.88
ABCD4-220ENST00000553998 GUCD1Q96NT3 240 aa9.56□□□□□ -0.88
ABCD4-220ENST00000553998 GPR75-ASB3A0A0A6YYF3 556 aa9.55□□□□□ -0.88
ABCD4-220ENST00000553998 HOXA7P31268 230 aaPredicted RBP9.55□□□□□ -0.88
ABCD4-220ENST00000553998 RHBDL3P58872 404 aa9.55□□□□□ -0.88
ABCD4-220ENST00000553998 SPP2Q13103 211 aa9.55□□□□□ -0.88
ABCD4-220ENST00000553998 PDE3AQ14432 1141 aa9.55□□□□□ -0.88
ABCD4-220ENST00000553998 SLF2Q8IX21 1173 aa9.55□□□□□ -0.88
ABCD4-220ENST00000553998 TRMT44Q8IYL2 757 aaKnown RBP9.55□□□□□ -0.88
ABCD4-220ENST00000553998 ASCC2Q9H1I8 757 aaPredicted RBP9.55□□□□□ -0.88
ABCD4-220ENST00000553998 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.55□□□□□ -0.88
ABCD4-220ENST00000553998 TAOK2Q9UL54 1235 aa9.55□□□□□ -0.88
ABCD4-220ENST00000553998 HDAC5Q9UQL6 1122 aa9.55□□□□□ -0.88
ABCD4-220ENST00000553998 EYSQ5T1H1 3165 aa9.55□□□□□ -0.88
ABCD4-220ENST00000553998 PRKAR2AP13861 404 aaKnown RBP9.54□□□□□ -0.88
ABCD4-220ENST00000553998 CAP2P40123 477 aa9.54□□□□□ -0.88
ABCD4-220ENST00000553998 PHKA1P46020 1223 aa9.54□□□□□ -0.88
ABCD4-220ENST00000553998 ATP2B3Q16720 1220 aa9.54□□□□□ -0.88
ABCD4-220ENST00000553998 CCDC84Q86UT8 332 aaPredicted RBP9.54□□□□□ -0.88
ABCD4-220ENST00000553998 ZSCAN29Q8IWY8 852 aaPredicted RBP9.54□□□□□ -0.88
ABCD4-220ENST00000553998 CLUAP1Q96AJ1 413 aa9.54□□□□□ -0.88
ABCD4-220ENST00000553998 NUDT12Q9BQG2 462 aa9.54□□□□□ -0.88
ABCD4-220ENST00000553998 WDR18Q9BV38 432 aa9.54□□□□□ -0.88
ABCD4-220ENST00000553998 CEP126Q9P2H0 1117 aa9.54□□□□□ -0.88
ABCD4-220ENST00000553998 CDH23Q9H251 3354 aa9.54□□□□□ -0.88
ABCD4-220ENST00000553998 USP17L5A8MUK1 530 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 GNAI3P08754 354 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 IL15P40933 162 aaPredicted RBP9.53□□□□□ -0.88
ABCD4-220ENST00000553998 BTDP43251 543 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 HMGCS2P54868 508 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 RRP1P56182 461 aaKnown RBP9.53□□□□□ -0.88
ABCD4-220ENST00000553998 CACNB2Q08289 660 aaPredicted RBP9.53□□□□□ -0.88
ABCD4-220ENST00000553998 RRP1BQ14684 758 aaKnown RBP9.53□□□□□ -0.88
ABCD4-220ENST00000553998 LRRC26Q2I0M4 334 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 SPTY2D1Q68D10 685 aaPredicted RBP9.53□□□□□ -0.88
ABCD4-220ENST00000553998 CCDC102BQ68D86 513 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 TMEM57Q8N5G2 664 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 ZNF384Q8TF68 577 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 SOCS4Q8WXH5 440 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
ABCD4-220ENST00000553998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.53□□□□□ -0.88
ABCD4-220ENST00000553998 MGAMO43451 1857 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 MROH7-TTC4A0A0A0MT08 1334 aa9.53□□□□□ -0.88
ABCD4-220ENST00000553998 ALPK3Q96L96 1907 aa9.52□□□□□ -0.88
ABCD4-220ENST00000553998 UBTFL1P0CB47 393 aaPredicted RBP9.52□□□□□ -0.89
ABCD4-220ENST00000553998 RLBP1P12271 317 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 CYP2B6P20813 491 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 MAPK4P31152 587 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 BACE1P56817 501 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 RASGRF1Q13972 1273 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 MORN1Q5T089 497 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 METTL16Q86W50 562 aaKnown RBP9.52□□□□□ -0.89
ABCD4-220ENST00000553998 GPRC5AQ8NFJ5 357 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 P2RX7Q99572 595 aaKnown RBP9.52□□□□□ -0.89
ABCD4-220ENST00000553998 TXNRD2Q9NNW7 524 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 RBPJLQ9UBG7 517 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 HERC5Q9UII4 1024 aaKnown RBP9.52□□□□□ -0.89
ABCD4-220ENST00000553998 TNNQ9UQP3 1299 aa9.52□□□□□ -0.89
ABCD4-220ENST00000553998 DNAH12Q6ZR08 3092 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 C19orf81C9J6K1 198 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 IGHA2P01877 340 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 CENPBP07199 599 aaPredicted RBP9.51□□□□□ -0.89
ABCD4-220ENST00000553998 MDM2Q00987 491 aaPredicted RBP9.51□□□□□ -0.89
ABCD4-220ENST00000553998 MECOMQ03112 1051 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 PICALMQ13492 652 aa9.51□□□□□ -0.89
ABCD4-220ENST00000553998 MVPQ14764 893 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms