RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 GRAPLQ8TC17 118 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 SYAP1Q96A49 352 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 STRBPQ96SI9 672 aaKnown RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 PRKD2Q9BZL6 878 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 CNNM2Q9H8M5 875 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 PRDM9Q9NQV7 894 aa8.61□□□□□ -1.03
ATXN3-221ENST00000553498 SRP68Q9UHB9 627 aaKnown RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 DDX49Q9Y6V7 483 aaKnown RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 V9GY48 417 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-221ENST00000553498 GOLGA6L3A6NEY3 463 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 MOXD2PA6NHM9 499 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 BBOX1O75936 387 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 F13A1P00488 732 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 CPA1P15085 419 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 TM4SF1P30408 202 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 PKP1Q13835 747 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 NFIXQ14938 502 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 CRY2Q49AN0 593 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 LARP1BQ659C4 914 aaKnown RBP8.6□□□□□ -1.03
ATXN3-221ENST00000553498 SPTY2D1Q68D10 685 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-221ENST00000553498 SMARCC2Q8TAQ2 1214 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 CELF1Q92879 486 aaKnown RBP8.6□□□□□ -1.03
ATXN3-221ENST00000553498 TMEM87BQ96K49 555 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 KRT23Q9C075 422 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 RNF41Q9H4P4 317 aaPredicted RBP8.6□□□□□ -1.03
ATXN3-221ENST00000553498 LRRC4BQ9NT99 713 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 LMBRD1Q9NUN5 540 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 LRP2BPQ9P2M1 347 aa8.6□□□□□ -1.03
ATXN3-221ENST00000553498 SALL1Q9NSC2 1324 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 FSD2A1L4K1 749 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 KLRG2A4D1S0 409 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 FOXP2O15409 715 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 GYS1P13807 737 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 HOXA10P31260 410 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 HIBADHP31937 336 aaKnown RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 MRE11P49959 708 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 RCAN1P53805 252 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 KCNQ4P56696 695 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 TXNRD1Q16881 649 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 ATL3Q6DD88 541 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 NAA16Q6N069 864 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 PI16Q6UXB8 463 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 STOX1Q6ZVD7 989 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 MB21D2Q8IYB1 491 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 NLGN1Q8N2Q7 840 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 TMTC2Q8N394 836 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 MAGEB6Q8N7X4 407 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 SYMPKQ92797 1274 aaKnown RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 BRF1Q92994 677 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 RBM17Q96I25 401 aaKnown RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 FAM84BQ96KN1 310 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 NAPBQ9H115 298 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 ZSCAN16Q9H4T2 348 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-221ENST00000553498 MTMR6Q9Y217 621 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 LY75O60449 1722 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 C4BP0C0L5 1744 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 COL24A1Q17RW2 1714 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 NUP98P52948 1817 aa8.59□□□□□ -1.03
ATXN3-221ENST00000553498 XDHP47989 1333 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 CDKL5O76039 1030 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 LETM1O95202 739 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-221ENST00000553498 LARGE1O95461 756 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 CHGBP05060 677 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 APPP05067 770 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 FDX1P10109 184 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 MMP16P51512 607 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 ZNF445P59923 1031 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 FAM182BQ5T319 152 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 PRR5LQ6MZQ0 368 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 FAM184AQ8NB25 1140 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 WDR66Q8TBY9 1149 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 RPGRQ92834 1020 aaKnown RBP8.58□□□□□ -1.04
ATXN3-221ENST00000553498 CRAMP1Q96RY5 1269 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
ATXN3-221ENST00000553498 BRIP1Q9BX63 1249 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 ANAPC4Q9UJX5 808 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 WWC3Q9ULE0 1092 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 TAF6LQ9Y6J9 622 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 BTAF1O14981 1849 aa8.58□□□□□ -1.04
ATXN3-221ENST00000553498 ARAP2Q8WZ64 1704 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 ELP1O95163 1332 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 MAGEB6P1A0A0J9YX57 407 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 PRC1O43663 620 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 PRPF40AO75400 957 aaKnown RBP8.57□□□□□ -1.04
ATXN3-221ENST00000553498 TRIM37O94972 964 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 MBD4O95243 580 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 SERPINB2P05120 415 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 CYP7A1P22680 504 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 ATP2B4P23634 1241 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 PDIA3P30101 505 aaKnown RBP8.57□□□□□ -1.04
ATXN3-221ENST00000553498 GJA5P36382 358 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 LIFRP42702 1097 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 UBE2HP62256 183 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 GSTO1P78417 241 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 ST3GAL1Q11201 340 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 SART3Q15020 963 aaKnown RBP8.57□□□□□ -1.04
ATXN3-221ENST00000553498 PPP2R5BQ15173 497 aa8.57□□□□□ -1.04
ATXN3-221ENST00000553498 CPLX2Q6PUV4 134 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms