RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 ATF7IPQ6VMQ6 1270 aa18.55■□□□□ 0.56
APEX1-204ENST00000553368 PROCA1Q8NCQ7 364 aaPredicted RBP18.55■□□□□ 0.56
APEX1-204ENST00000553368 SMCR8Q8TEV9 937 aaPredicted RBP18.55■□□□□ 0.56
APEX1-204ENST00000553368 DPF3Q92784 378 aa18.55■□□□□ 0.56
APEX1-204ENST00000553368 HTATIP2Q9BUP3 242 aa18.55■□□□□ 0.56
APEX1-204ENST00000553368 DOCK3Q8IZD9 2030 aa18.54■□□□□ 0.56
APEX1-204ENST00000553368 TNPO2O14787 897 aaKnown RBP18.54■□□□□ 0.56
APEX1-204ENST00000553368 UQCRFS1P1P0C7P4 283 aa18.54■□□□□ 0.56
APEX1-204ENST00000553368 CAP2P40123 477 aa18.54■□□□□ 0.56
APEX1-204ENST00000553368 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.561e-8■■□□□ 13.9
APEX1-204ENST00000553368 RRP1BQ14684 758 aaKnown RBP18.54■□□□□ 0.56
APEX1-204ENST00000553368 FAM110CQ1W6H9 321 aa18.54■□□□□ 0.56
APEX1-204ENST00000553368 ZNF280CQ8ND82 737 aa18.54■□□□□ 0.56
APEX1-204ENST00000553368 RAI14Q9P0K7 980 aa18.54■□□□□ 0.56
APEX1-204ENST00000553368 PNMA3Q9UL41 463 aa18.54■□□□□ 0.56
APEX1-204ENST00000553368 LOC285556D6RIA3 1793 aa18.53■□□□□ 0.56
APEX1-204ENST00000553368 BCAR3O75815 825 aa18.53■□□□□ 0.56
APEX1-204ENST00000553368 ELNP15502 786 aa18.53■□□□□ 0.56
APEX1-204ENST00000553368 SPP2Q13103 211 aa18.53■□□□□ 0.56
APEX1-204ENST00000553368 SH3D19Q5HYK7 790 aa18.53■□□□□ 0.56
APEX1-204ENST00000553368 ANKRD13CQ8N6S4 541 aa18.53■□□□□ 0.56
APEX1-204ENST00000553368 GPR108Q9NPR9 543 aa18.53■□□□□ 0.56
APEX1-204ENST00000553368 ATAD5Q96QE3 1844 aa18.52■□□□□ 0.56
APEX1-204ENST00000553368 INHAP05111 366 aa18.52■□□□□ 0.56
APEX1-204ENST00000553368 CHRDL2Q6WN34 429 aa18.52■□□□□ 0.56
APEX1-204ENST00000553368 TEX11Q8IYF3 940 aa18.52■□□□□ 0.56
APEX1-204ENST00000553368 PRO3102Q9H379 93 aa18.52■□□□□ 0.56
APEX1-204ENST00000553368 HERC5Q9UII4 1024 aaKnown RBP18.52■□□□□ 0.56
APEX1-204ENST00000553368 USP17L5A8MUK1 530 aa18.51■□□□□ 0.55
APEX1-204ENST00000553368 FARP2O94887 1054 aaPredicted RBP18.51■□□□□ 0.55
APEX1-204ENST00000553368 GCLCP48506 637 aaPredicted RBP18.51■□□□□ 0.55
APEX1-204ENST00000553368 PPP4CP60510 307 aa18.51■□□□□ 0.55
APEX1-204ENST00000553368 POLA2Q14181 598 aa18.51■□□□□ 0.55
APEX1-204ENST00000553368 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
APEX1-204ENST00000553368 COA7Q96BR5 231 aa18.51■□□□□ 0.55
APEX1-204ENST00000553368 PAK6Q9NQU5 681 aaPredicted RBP18.51■□□□□ 0.55
APEX1-204ENST00000553368 LRP2BPQ9P2M1 347 aa18.51■□□□□ 0.55
APEX1-204ENST00000553368 TRIOBPQ9H2D6 2365 aa18.5■□□□□ 0.55
APEX1-204ENST00000553368 PABPC4Q13310 644 aaKnown RBP eCLIP18.5■□□□□ 0.55
APEX1-204ENST00000553368 METTL16Q86W50 562 aaKnown RBP18.5■□□□□ 0.55
APEX1-204ENST00000553368 FRAT1Q92837 279 aaPredicted RBP18.5■□□□□ 0.55
APEX1-204ENST00000553368 WDR18Q9BV38 432 aa18.5■□□□□ 0.55
APEX1-204ENST00000553368 CRISPLD2Q9H0B8 497 aa18.5■□□□□ 0.55
APEX1-204ENST00000553368 DHX36Q9H2U1 1008 aaKnown RBP18.5■□□□□ 0.55
APEX1-204ENST00000553368 RBM27Q9P2N5 1060 aaKnown RBP18.5■□□□□ 0.55
APEX1-204ENST00000553368 PI4KBQ9UBF8 816 aa18.5■□□□□ 0.55
APEX1-204ENST00000553368 SIPA1L1O43166 1804 aa18.5■□□□□ 0.55
APEX1-204ENST00000553368 IGSF3O75054 1194 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 HMGCS2P54868 508 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 TNNI3KQ59H18 835 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 SSH3Q8TE77 659 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 ZNF512BQ96KM6 892 aaPredicted RBP18.49■□□□□ 0.55
APEX1-204ENST00000553368 ASCC2Q9H1I8 757 aaPredicted RBP18.49■□□□□ 0.55
APEX1-204ENST00000553368 AS3MTQ9HBK9 375 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 GJD2Q9UKL4 321 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 NR2E3Q9Y5X4 410 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 FPGT-TNNI3KV9GXZ4 949 aa18.49■□□□□ 0.55
APEX1-204ENST00000553368 ZBTB7BO15156 539 aaPredicted RBP18.48■□□□□ 0.55
APEX1-204ENST00000553368 BAG3O95817 575 aa18.48■□□□□ 0.55
APEX1-204ENST00000553368 CYP2E1P05181 493 aaPredicted RBP18.48■□□□□ 0.55
APEX1-204ENST00000553368 ATP8B2P98198 1209 aa18.48■□□□□ 0.55
APEX1-204ENST00000553368 NAA16Q6N069 864 aaPredicted RBP18.48■□□□□ 0.55
APEX1-204ENST00000553368 DEFB118Q96PH6 123 aa18.48■□□□□ 0.55
APEX1-204ENST00000553368 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
APEX1-204ENST00000553368 NOL10Q9BSC4 688 aaKnown RBP18.48■□□□□ 0.55
APEX1-204ENST00000553368 SNRKQ9NRH2 765 aa18.48■□□□□ 0.55
APEX1-204ENST00000553368 AATFQ9NY61 560 aaKnown RBP eCLIP18.48■□□□□ 0.55
APEX1-204ENST00000553368 MORF4L1Q9UBU8 362 aa18.48■□□□□ 0.55
APEX1-204ENST00000553368 MAST2Q6P0Q8 1798 aa18.47■□□□□ 0.55
APEX1-204ENST00000553368 SZT2Q5T011 3432 aa18.47■□□□□ 0.55
APEX1-204ENST00000553368 TFRCP02786 760 aaKnown RBP18.47■□□□□ 0.55
APEX1-204ENST00000553368 PLCG2P16885 1265 aa18.47■□□□□ 0.55
APEX1-204ENST00000553368 JAG1P78504 1218 aa18.47■□□□□ 0.55
APEX1-204ENST00000553368 CCDC158Q5M9N0 1113 aa18.47■□□□□ 0.55
APEX1-204ENST00000553368 TTC39AQ5SRH9 613 aa18.47■□□□□ 0.55
APEX1-204ENST00000553368 FOXP4Q8IVH2 680 aaPredicted RBP18.47■□□□□ 0.55
APEX1-204ENST00000553368 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
APEX1-204ENST00000553368 CDK5RAP2Q96SN8 1893 aa18.46■□□□□ 0.55
APEX1-204ENST00000553368 ASNSP08243 561 aa18.46■□□□□ 0.55
APEX1-204ENST00000553368 HOXA7P31268 230 aaPredicted RBP18.46■□□□□ 0.55
APEX1-204ENST00000553368 BACE1P56817 501 aa18.46■□□□□ 0.55
APEX1-204ENST00000553368 ZKSCAN2Q63HK3 967 aa18.46■□□□□ 0.55
APEX1-204ENST00000553368 ADGRA1Q86SQ6 560 aa18.46■□□□□ 0.55
APEX1-204ENST00000553368 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
APEX1-204ENST00000553368 GINM1Q9NU53 330 aa18.46■□□□□ 0.55
APEX1-204ENST00000553368 FOCADQ5VW36 1801 aa18.46■□□□□ 0.55
APEX1-204ENST00000553368 RANBP2P49792 3224 aaKnown RBP18.45■□□□□ 0.54
APEX1-204ENST00000553368 MAPKAPK5Q8IW41 473 aa18.45■□□□□ 0.54
APEX1-204ENST00000553368 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.45■□□□□ 0.54
APEX1-204ENST00000553368 TAOK2Q9UL54 1235 aa18.45■□□□□ 0.54
APEX1-204ENST00000553368 NOP58Q9Y2X3 529 aaKnown RBP18.45■□□□□ 0.54
APEX1-204ENST00000553368 FLT1P17948 1338 aa18.45■□□□□ 0.54
APEX1-204ENST00000553368 PLXNB2O15031 1838 aa18.44■□□□□ 0.54
APEX1-204ENST00000553368 MYO5AQ9Y4I1 1855 aaKnown RBP18.44■□□□□ 0.54
APEX1-204ENST00000553368 C19orf81C9J6K1 198 aa18.44■□□□□ 0.54
APEX1-204ENST00000553368 HMGCRP04035 888 aa18.44■□□□□ 0.54
APEX1-204ENST00000553368 ZAP70P43403 619 aa18.44■□□□□ 0.54
APEX1-204ENST00000553368 MTMR2Q13614 643 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms