RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 AAMPQ13685 434 aa22.76■■□□□ 1.23
HDAC4-217ENST00000553145 SLC4A8Q2Y0W8 1093 aa22.76■■□□□ 1.23
HDAC4-217ENST00000553145 CERS3Q8IU89 383 aa22.76■■□□□ 1.23
HDAC4-217ENST00000553145 FAM43AQ8N2R8 423 aa22.76■■□□□ 1.23
HDAC4-217ENST00000553145 DHX36Q9H2U1 1008 aaKnown RBP22.76■■□□□ 1.23
HDAC4-217ENST00000553145 DNAJC18Q9H819 358 aa22.76■■□□□ 1.23
HDAC4-217ENST00000553145 PI4KBQ9UBF8 816 aa22.76■■□□□ 1.23
HDAC4-217ENST00000553145 KCNH4Q9UQ05 1017 aa22.76■■□□□ 1.23
HDAC4-217ENST00000553145 PTPRAP18433 802 aa22.75■■□□□ 1.23
HDAC4-217ENST00000553145 USP5P45974 858 aa22.75■■□□□ 1.23
HDAC4-217ENST00000553145 CRHR2Q13324 411 aa22.75■■□□□ 1.23
HDAC4-217ENST00000553145 NOM1Q5C9Z4 860 aaKnown RBP22.75■■□□□ 1.23
HDAC4-217ENST00000553145 OTUD7BQ6GQQ9 843 aa22.75■■□□□ 1.23
HDAC4-217ENST00000553145 CCDC84Q86UT8 332 aaPredicted RBP22.75■■□□□ 1.23
HDAC4-217ENST00000553145 GPATCH3Q96I76 525 aa22.75■■□□□ 1.23
HDAC4-217ENST00000553145 PHIPQ8WWQ0 1821 aa22.75■■□□□ 1.23
HDAC4-217ENST00000553145 MYH1P12882 1939 aa22.74■■□□□ 1.23
HDAC4-217ENST00000553145 MYH7P12883 1935 aa22.74■■□□□ 1.23
HDAC4-217ENST00000553145 BTBD19C9JJ37 291 aa22.74■■□□□ 1.23
HDAC4-217ENST00000553145 LCORLQ8N3X6 602 aa22.74■■□□□ 1.23
HDAC4-217ENST00000553145 PICK1Q9NRD5 415 aa22.74■■□□□ 1.23
HDAC4-217ENST00000553145 HERC5Q9UII4 1024 aaKnown RBP22.74■■□□□ 1.23
HDAC4-217ENST00000553145 ZHX2Q9Y6X8 837 aa22.74■■□□□ 1.23
HDAC4-217ENST00000553145 ATAD5Q96QE3 1844 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 DGKZQ13574 1117 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 MOGSQ13724 837 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 ANKRD45Q5TZF3 282 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 METTL16Q86W50 562 aaKnown RBP22.73■■□□□ 1.23
HDAC4-217ENST00000553145 PI4K2BQ8TCG2 481 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 GCC1Q96CN9 775 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.73■■□□□ 1.23
HDAC4-217ENST00000553145 MCOLN1Q9GZU1 580 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 SALL3Q9BXA9 1300 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 NAV1Q8NEY1 1877 aa22.73■■□□□ 1.23
HDAC4-217ENST00000553145 ARMT1Q9H993 441 aa22.72■■□□□ 1.23
HDAC4-217ENST00000553145 AFG3L2Q9Y4W6 797 aa22.72■■□□□ 1.23
HDAC4-217ENST00000553145 TTC41PQ6P2S7 1318 aa22.72■■□□□ 1.23
HDAC4-217ENST00000553145 HLA-DOAP06340 250 aa22.71■■□□□ 1.23
HDAC4-217ENST00000553145 CAP2P40123 477 aa22.71■■□□□ 1.23
HDAC4-217ENST00000553145 UBE3CQ15386 1083 aa22.71■■□□□ 1.23
HDAC4-217ENST00000553145 TAF1CQ15572 869 aaPredicted RBP22.71■■□□□ 1.23
HDAC4-217ENST00000553145 FOXP4Q8IVH2 680 aaPredicted RBP22.71■■□□□ 1.23
HDAC4-217ENST00000553145 SDR42E1Q8WUS8 393 aa22.71■■□□□ 1.23
HDAC4-217ENST00000553145 CRNKL1Q9BZJ0 848 aaKnown RBP22.71■■□□□ 1.23
HDAC4-217ENST00000553145 CXCL11O14625 94 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 FKTNO75072 461 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 CAPN15O75808 1086 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 MBD4O95243 580 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 IGHDP01880 384 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 MX1P20591 662 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 JAG1P78504 1218 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 SHROOM1Q2M3G4 852 aaPredicted RBP22.7■■□□□ 1.22
HDAC4-217ENST00000553145 CRACR2BQ8N4Y2 399 aaPredicted RBP22.7■■□□□ 1.22
HDAC4-217ENST00000553145 KBTBD3Q8NAB2 608 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 ABHD8Q96I13 439 aa22.7■■□□□ 1.22
HDAC4-217ENST00000553145 PTPRFP10586 1907 aa22.69■■□□□ 1.22
HDAC4-217ENST00000553145 IRX6P78412 446 aaPredicted RBP22.69■■□□□ 1.22
HDAC4-217ENST00000553145 CTU1Q7Z7A3 348 aaKnown RBP22.69■■□□□ 1.22
HDAC4-217ENST00000553145 A0A0G2JLL6 359 aaPredicted RBP22.68■■□□□ 1.22
HDAC4-217ENST00000553145 PRKAB2O43741 272 aa22.68■■□□□ 1.22
HDAC4-217ENST00000553145 PLCD1P51178 756 aa22.68■■□□□ 1.22
HDAC4-217ENST00000553145 EVX2Q03828 476 aa22.68■■□□□ 1.22
HDAC4-217ENST00000553145 ZSCAN25Q6NSZ9 544 aa22.68■■□□□ 1.22
HDAC4-217ENST00000553145 PRRT2Q7Z6L0 340 aaPredicted RBP22.68■■□□□ 1.22
HDAC4-217ENST00000553145 ANKRD23Q86SG2 305 aa22.68■■□□□ 1.22
HDAC4-217ENST00000553145 SMC5Q8IY18 1101 aa22.68■■□□□ 1.22
HDAC4-217ENST00000553145 TRIM34Q9BYJ4 488 aa22.68■■□□□ 1.22
HDAC4-217ENST00000553145 PUS7LQ9H0K6 701 aaKnown RBP22.68■■□□□ 1.22
HDAC4-217ENST00000553145 ZCCHC17Q9NP64 241 aaKnown RBP22.68■■□□□ 1.22
HDAC4-217ENST00000553145 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
HDAC4-217ENST00000553145 GDF11O95390 407 aa22.67■■□□□ 1.22
HDAC4-217ENST00000553145 GPAT2Q6NUI2 795 aa22.67■■□□□ 1.22
HDAC4-217ENST00000553145 EHD4Q9H223 541 aa22.67■■□□□ 1.22
HDAC4-217ENST00000553145 RWDD1Q9H446 243 aaPredicted RBP22.67■■□□□ 1.22
HDAC4-217ENST00000553145 ZFYVE28Q9HCC9 887 aa22.67■■□□□ 1.22
HDAC4-217ENST00000553145 DCP1AQ9NPI6 582 aaPredicted RBP22.67■■□□□ 1.22
HDAC4-217ENST00000553145 PDHXO00330 501 aa22.66■■□□□ 1.22
HDAC4-217ENST00000553145 ERC2O15083 957 aa22.66■■□□□ 1.22
HDAC4-217ENST00000553145 GLRX3O76003 335 aaKnown RBP22.66■■□□□ 1.22
HDAC4-217ENST00000553145 TTC6Q86TZ1 520 aa22.66■■□□□ 1.22
HDAC4-217ENST00000553145 MCM9Q9NXL9 1143 aa22.66■■□□□ 1.22
HDAC4-217ENST00000553145 ZBTB47Q9UFB7 747 aaPredicted RBP22.66■■□□□ 1.22
HDAC4-217ENST00000553145 SERPINB13Q9UIV8 391 aa22.66■■□□□ 1.22
HDAC4-217ENST00000553145 CYP2D6P10635 497 aa22.65■■□□□ 1.22
HDAC4-217ENST00000553145 CAP1Q01518 475 aa22.65■■□□□ 1.22
HDAC4-217ENST00000553145 LNPKQ9C0E8 428 aa22.65■■□□□ 1.22
HDAC4-217ENST00000553145 USP17L5A8MUK1 530 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 TLR2O60603 784 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 POLR3DP05423 398 aaPredicted RBP22.64■■□□□ 1.21
HDAC4-217ENST00000553145 SPP2Q13103 211 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 B4GALNT3Q6L9W6 998 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 TATDN1Q6P1N9 297 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 GADL1Q6ZQY3 521 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 CD99L2Q8TCZ2 262 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 OSBP2Q969R2 916 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 STAP2Q9UGK3 403 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 ZBTB21Q9ULJ3 1066 aa22.64■■□□□ 1.21
HDAC4-217ENST00000553145 ADGRA2Q96PE1 1338 aa22.63■■□□□ 1.21
HDAC4-217ENST00000553145 RNF113AO15541 343 aaKnown RBP22.63■■□□□ 1.21
HDAC4-217ENST00000553145 ASNSP08243 561 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 263.2 ms