RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LDHCP07864 332 aa17.54■□□□□ 0.4
CHMP1A-210ENST00000551981 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
CHMP1A-210ENST00000551981 NECAB2Q7Z6G3 386 aa17.54■□□□□ 0.4
CHMP1A-210ENST00000551981 CCDC84Q86UT8 332 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-210ENST00000551981 ZNF280CQ8ND82 737 aa17.54■□□□□ 0.4
CHMP1A-210ENST00000551981 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.54■□□□□ 0.42e-7■■■■□ 21.5
CHMP1A-210ENST00000551981 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
CHMP1A-210ENST00000551981 COL2A1P02458 1487 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-210ENST00000551981 SRGAP3O43295 1099 aa17.53■□□□□ 0.4
CHMP1A-210ENST00000551981 HMGCRP04035 888 aa17.53■□□□□ 0.4
CHMP1A-210ENST00000551981 RHBDL3P58872 404 aa17.53■□□□□ 0.4
CHMP1A-210ENST00000551981 SPP2Q13103 211 aa17.53■□□□□ 0.4
CHMP1A-210ENST00000551981 ANKLE1Q8NAG6 615 aa17.53■□□□□ 0.4
CHMP1A-210ENST00000551981 PAWRQ96IZ0 340 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-210ENST00000551981 TFCP2Q12800 502 aa17.52■□□□□ 0.4
CHMP1A-210ENST00000551981 GORABQ5T7V8 394 aa17.52■□□□□ 0.4
CHMP1A-210ENST00000551981 NEUROD6Q96NK8 337 aa17.52■□□□□ 0.4
CHMP1A-210ENST00000551981 MEIS3Q99687 375 aa17.52■□□□□ 0.4
CHMP1A-210ENST00000551981 AS3MTQ9HBK9 375 aa17.52■□□□□ 0.4
CHMP1A-210ENST00000551981 ALPK3Q96L96 1907 aa17.52■□□□□ 0.4
CHMP1A-210ENST00000551981 FAM196BA6NMK8 535 aa17.51■□□□□ 0.39
CHMP1A-210ENST00000551981 GNAI3P08754 354 aa17.51■□□□□ 0.39
CHMP1A-210ENST00000551981 HMGCS2P54868 508 aa17.51■□□□□ 0.39
CHMP1A-210ENST00000551981 SPATA5Q8NB90 893 aa17.51■□□□□ 0.39
CHMP1A-210ENST00000551981 CDCA7LQ96GN5 454 aa17.51■□□□□ 0.39
CHMP1A-210ENST00000551981 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
CHMP1A-210ENST00000551981 STAP2Q9UGK3 403 aa17.51■□□□□ 0.39
CHMP1A-210ENST00000551981 USP17L5A8MUK1 530 aa17.5■□□□□ 0.39
CHMP1A-210ENST00000551981 CAP2P40123 477 aa17.5■□□□□ 0.39
CHMP1A-210ENST00000551981 ZNF384Q8TF68 577 aa17.5■□□□□ 0.39
CHMP1A-210ENST00000551981 NSUN4Q96CB9 384 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-210ENST00000551981 NOL10Q9BSC4 688 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-210ENST00000551981 HMX1Q9NP08 348 aaPredicted RBP17.5■□□□□ 0.39
CHMP1A-210ENST00000551981 HMG20BQ9P0W2 317 aa17.5■□□□□ 0.39
CHMP1A-210ENST00000551981 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
CHMP1A-210ENST00000551981 RPTORQ8N122 1335 aa17.49■□□□□ 0.39
CHMP1A-210ENST00000551981 TEX11Q8IYF3 940 aa17.49■□□□□ 0.39
CHMP1A-210ENST00000551981 TRMT2AQ8IZ69 625 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-210ENST00000551981 SLC17A8Q8NDX2 589 aa17.49■□□□□ 0.39
CHMP1A-210ENST00000551981 DIS3LQ8TF46 1054 aaKnown RBP17.49■□□□□ 0.39
CHMP1A-210ENST00000551981 ASCC2Q9H1I8 757 aaPredicted RBP17.49■□□□□ 0.39
CHMP1A-210ENST00000551981 COL6A3P12111 3177 aa17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 IRX3P78415 501 aaPredicted RBP17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 MTX1Q13505 466 aa17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 SH3D19Q5HYK7 790 aa17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 TBC1D9Q6ZT07 1266 aa17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 C7orf61Q8IZ16 206 aa17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 LRP2BPQ9P2M1 347 aa17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 GJD2Q9UKL4 321 aa17.48■□□□□ 0.39
CHMP1A-210ENST00000551981 DDX60LQ5H9U9 1706 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 SOX1O00570 391 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 ARID4AP29374 1257 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 PI16Q6UXB8 463 aa17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 DHX36Q9H2U1 1008 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 TMOD4Q9NZQ9 345 aa17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 PI4KBQ9UBF8 816 aa17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 MORF4L1Q9UBU8 362 aa17.47■□□□□ 0.39
CHMP1A-210ENST00000551981 MAST2Q6P0Q8 1798 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 BAG3O95817 575 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 ASNSP08243 561 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 UQCRFS1P1P0C7P4 283 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 PLCG2P16885 1265 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 BMP8BP34820 402 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 LRCH3Q96II8 777 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 WDR18Q9BV38 432 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 TRIM34Q9BYJ4 488 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 C11orf49Q9H6J7 331 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 PLXNB2O15031 1838 aa17.46■□□□□ 0.39
CHMP1A-210ENST00000551981 BACE1P56817 501 aa17.45■□□□□ 0.38
CHMP1A-210ENST00000551981 G3BP1Q13283 466 aaKnown RBP eCLIP17.45■□□□□ 0.38
CHMP1A-210ENST00000551981 MTMR2Q13614 643 aa17.45■□□□□ 0.38
CHMP1A-210ENST00000551981 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-210ENST00000551981 SH3RF3Q8TEJ3 882 aaPredicted RBP17.45■□□□□ 0.38
CHMP1A-210ENST00000551981 SOCS4Q8WXH5 440 aa17.45■□□□□ 0.38
CHMP1A-210ENST00000551981 GDF15Q99988 308 aa17.45■□□□□ 0.38
CHMP1A-210ENST00000551981 A0A0C4DFX4 3053 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 DLL1O00548 723 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 HOXA7P31268 230 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 MCAMP43121 646 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 TRIM32Q13049 653 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 PDE3AQ14432 1141 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 GPR153Q6NV75 609 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 TRMT44Q8IYL2 757 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 GPRC5AQ8NFJ5 357 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 TRIB2Q92519 343 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 NUDT12Q9BQG2 462 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 GINM1Q9NU53 330 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 OGDHLQ9ULD0 1010 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 ZMYND8Q9ULU4 1186 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 SIPA1L1O43166 1804 aa17.44■□□□□ 0.38
CHMP1A-210ENST00000551981 CUL9Q8IWT3 2517 aa17.43■□□□□ 0.38
CHMP1A-210ENST00000551981 FOCADQ5VW36 1801 aa17.43■□□□□ 0.38
CHMP1A-210ENST00000551981 C19orf81C9J6K1 198 aa17.43■□□□□ 0.38
CHMP1A-210ENST00000551981 GNAI2P04899 355 aa17.43■□□□□ 0.38
CHMP1A-210ENST00000551981 XRCC5P13010 732 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-210ENST00000551981 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
CHMP1A-210ENST00000551981 CYP2B6P20813 491 aa17.43■□□□□ 0.38
CHMP1A-210ENST00000551981 RARSP54136 660 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms