RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 SLC51AQ86UW1 340 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 RRP9O43818 475 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-218ENST00000550804 PRDM1O75626 825 aa16.41■□□□□ 0.22
CALCOCO1-218ENST00000550804 SLC3A2P08195 630 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-218ENST00000550804 U2AF2P26368 475 aaKnown RBP eCLIP16.41■□□□□ 0.225e-10■■■□□ 16.8
CALCOCO1-218ENST00000550804 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
CALCOCO1-218ENST00000550804 ANKRD18AQ8IVF6 992 aa16.41■□□□□ 0.22
CALCOCO1-218ENST00000550804 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
CALCOCO1-218ENST00000550804 KRT23Q9C075 422 aa16.41■□□□□ 0.22
CALCOCO1-218ENST00000550804 BRWD3Q6RI45 1802 aa16.41■□□□□ 0.22
CALCOCO1-218ENST00000550804 hCG_1642624A0A1W2PR95 340 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 PPARAQ07869 468 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 WTAPQ15007 396 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 CEP57L1Q8IYX8 460 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 FAM84BQ96KN1 310 aaPredicted RBP16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 JAG2Q9Y219 1238 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 PNPLA7Q6ZV29 1317 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 GRIN1Q05586 938 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 SARM1Q6SZW1 724 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 MYRIPQ8NFW9 859 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 CNNM2Q9H8M5 875 aa16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 BSDC1Q9NW68 430 aaPredicted RBP16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
CALCOCO1-218ENST00000550804 FMNL1O95466 1100 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 TOB1P50616 345 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 NR5A1Q13285 461 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 TRIM29Q14134 588 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 MAGEB6P1A0A0J9YX57 407 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 IFNAR1P17181 557 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 GNAT2P19087 354 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 TAF1P21675 1872 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 SYKP43405 635 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 NBPF11Q86T75 865 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 LRRC8AQ8IWT6 810 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 C16orf45Q96MC5 204 aaPredicted RBP16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 ARID3AQ99856 593 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
CALCOCO1-218ENST00000550804 COL24A1Q17RW2 1714 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 PNOCQ13519 176 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 RTN1Q16799 776 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 LONRF3Q496Y0 759 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 SLC27A3Q5K4L6 730 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 FOXP4Q8IVH2 680 aaPredicted RBP16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 CRACR2BQ8N4Y2 399 aaPredicted RBP16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 FANCBQ8NB91 859 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 OXER1Q8TDS5 423 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 MRFAP1L1Q96HT8 127 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 DYNC1I1O14576 645 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 ADRA2BP18089 450 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 NFIXQ14938 502 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 DIS3L2Q8IYB7 885 aaKnown RBP16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 PROM2Q8N271 834 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 SHISA4Q96DD7 197 aa16.38■□□□□ 0.21
CALCOCO1-218ENST00000550804 C4AP0C0L4 1744 aa16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 ARAP2Q8WZ64 1704 aa16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 ZNF804BA4D1E1 1349 aa16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 FOXN1O15353 648 aa16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 RBM6P78332 1123 aaKnown RBP16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 ZRSR1Q15695 479 aaKnown RBP16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 NOSTRINQ8IVI9 506 aa16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 HPSEQ9Y251 543 aa16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 COL1A1P02452 1464 aaPredicted RBP16.37■□□□□ 0.21
CALCOCO1-218ENST00000550804 USP27XA6NNY8 438 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 MMP1P03956 469 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 TM4SF1P30408 202 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 ZNF654Q8IZM8 581 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 UBAC1Q9BSL1 405 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 MYH7P12883 1935 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 CASZ1Q86V15 1759 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 ERICH2A1L162 156 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 PPP6R2O75170 966 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 CDC25BP30305 580 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 RPS8P62241 208 aaKnown RBP16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 NCAPHQ15003 741 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 SART3Q15020 963 aaKnown RBP16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 SLC4A8Q2Y0W8 1093 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 CAVIN4Q5BKX8 364 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 ZNF772Q68DY9 489 aaPredicted RBP16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 TXNRD3Q86VQ6 643 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 TNKSO95271 1327 aa16.36■□□□□ 0.21
CALCOCO1-218ENST00000550804 RIOK3O14730 519 aaKnown RBP16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 ATP1A3P13637 1013 aa16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 NLRP12P59046 1061 aa16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 UBE4AQ14139 1066 aa16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 SEC23AQ15436 765 aa16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 PTPN21Q16825 1174 aa16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 GNL3LQ9NVN8 582 aaKnown RBP16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 PCDHB6Q9Y5E3 794 aa16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 FAM205CA6NFA0 338 aa16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 NMT2O60551 498 aa16.35■□□□□ 0.21
CALCOCO1-218ENST00000550804 LMOD1P29536 600 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms