RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CAP2P40123 477 aa26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 FLT3LGP49771 235 aa26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 RRP1BQ14684 758 aaKnown RBP26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 TNNI3KQ59H18 835 aa26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 TREML2Q5T2D2 321 aa26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 UBE2Q1Q7Z7E8 422 aa26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 SSH3Q8TE77 659 aa26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 TBC1D2Q9BYX2 928 aa26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 FPGT-TNNI3KV9GXZ4 949 aa26.67■■□□□ 1.86
SMARCC2-210ENST00000550519 ATP8B2P98198 1209 aa26.66■■□□□ 1.86
SMARCC2-210ENST00000550519 SPP2Q13103 211 aa26.66■■□□□ 1.86
SMARCC2-210ENST00000550519 ZNF280CQ8ND82 737 aa26.66■■□□□ 1.86
SMARCC2-210ENST00000550519 SH3RF3Q8TEJ3 882 aaPredicted RBP26.66■■□□□ 1.86
SMARCC2-210ENST00000550519 HERC5Q9UII4 1024 aaKnown RBP26.66■■□□□ 1.86
SMARCC2-210ENST00000550519 H0YGN5 161 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 TNPO2O14787 897 aaKnown RBP26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 ADCY3O60266 1144 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 IRF5Q13568 498 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 CCDC158Q5M9N0 1113 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 ANKRD13CQ8N6S4 541 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 PXYLP1Q8TE99 480 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 DBNDD2Q9BQY9 259 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 SNRKQ9NRH2 765 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 PNMA3Q9UL41 463 aa26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 COLQQ9Y215 455 aaPredicted RBP26.65■■□□□ 1.86
SMARCC2-210ENST00000550519 PPP4CP60510 307 aa26.64■■□□□ 1.86
SMARCC2-210ENST00000550519 FAM110CQ1W6H9 321 aa26.64■■□□□ 1.86
SMARCC2-210ENST00000550519 TTC39AQ5SRH9 613 aa26.64■■□□□ 1.86
SMARCC2-210ENST00000550519 NAA16Q6N069 864 aaPredicted RBP26.64■■□□□ 1.86
SMARCC2-210ENST00000550519 NOL10Q9BSC4 688 aaKnown RBP26.64■■□□□ 1.86
SMARCC2-210ENST00000550519 DHX36Q9H2U1 1008 aaKnown RBP26.64■■□□□ 1.86
SMARCC2-210ENST00000550519 PI4KBQ9UBF8 816 aa26.64■■□□□ 1.86
SMARCC2-210ENST00000550519 MGAMO43451 1857 aa26.64■■□□□ 1.85
SMARCC2-210ENST00000550519 BAG3O95817 575 aa26.63■■□□□ 1.85
SMARCC2-210ENST00000550519 CYP2E1P05181 493 aaPredicted RBP26.63■■□□□ 1.85
SMARCC2-210ENST00000550519 FXR1P51114 621 aaKnown RBP eCLIP26.63■■□□□ 1.85
SMARCC2-210ENST00000550519 ZNF512BQ96KM6 892 aaPredicted RBP26.63■■□□□ 1.85
SMARCC2-210ENST00000550519 UNC93B1Q9H1C4 597 aa26.63■■□□□ 1.85
SMARCC2-210ENST00000550519 AATFQ9NY61 560 aaKnown RBP eCLIP26.63■■□□□ 1.85
SMARCC2-210ENST00000550519 USP17L5A8MUK1 530 aa26.62■■□□□ 1.85
SMARCC2-210ENST00000550519 ELNP15502 786 aa26.62■■□□□ 1.85
SMARCC2-210ENST00000550519 PLCG2P16885 1265 aa26.62■■□□□ 1.85
SMARCC2-210ENST00000550519 HMGCS2P54868 508 aa26.62■■□□□ 1.85
SMARCC2-210ENST00000550519 OS9Q13438 667 aaPredicted RBP26.62■■□□□ 1.85
SMARCC2-210ENST00000550519 SH3D19Q5HYK7 790 aa26.62■■□□□ 1.85
SMARCC2-210ENST00000550519 U2AF1L4Q8WU68 220 aaKnown RBP26.62■■□□□ 1.85
SMARCC2-210ENST00000550519 NOP58Q9Y2X3 529 aaKnown RBP26.62■■□□□ 1.85
SMARCC2-210ENST00000550519 IGSF3O75054 1194 aa26.61■■□□□ 1.85
SMARCC2-210ENST00000550519 SURF6O75683 361 aaKnown RBP26.61■■□□□ 1.85
SMARCC2-210ENST00000550519 ADGRA1Q86SQ6 560 aa26.61■■□□□ 1.85
SMARCC2-210ENST00000550519 SGPL1O95470 568 aa26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 INHAP05111 366 aa26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 GCLCP48506 637 aaPredicted RBP26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 PABPC4Q13310 644 aaKnown RBP eCLIP26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 METTL16Q86W50 562 aaKnown RBP26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 TGFBRAP1Q8WUH2 860 aa26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 DPF3Q92784 378 aa26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 COA7Q96BR5 231 aa26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 C1orf115Q9H7X2 142 aa26.6■■□□□ 1.85
SMARCC2-210ENST00000550519 WDR18Q9BV38 432 aa26.59■■□□□ 1.85
SMARCC2-210ENST00000550519 ASCC2Q9H1I8 757 aaPredicted RBP26.59■■□□□ 1.85
SMARCC2-210ENST00000550519 AS3MTQ9HBK9 375 aa26.59■■□□□ 1.85
SMARCC2-210ENST00000550519 ZBTB7BO15156 539 aaPredicted RBP26.58■■□□□ 1.85
SMARCC2-210ENST00000550519 ZAP70P43403 619 aa26.58■■□□□ 1.85
SMARCC2-210ENST00000550519 FOXP4Q8IVH2 680 aaPredicted RBP26.58■■□□□ 1.85
SMARCC2-210ENST00000550519 MAPKAPK5Q8IW41 473 aa26.58■■□□□ 1.85
SMARCC2-210ENST00000550519 HTATIP2Q9BUP3 242 aa26.58■■□□□ 1.85
SMARCC2-210ENST00000550519 DNAJC18Q9H819 358 aa26.58■■□□□ 1.85
SMARCC2-210ENST00000550519 DBNLQ9UJU6 430 aaKnown RBP26.58■■□□□ 1.85
SMARCC2-210ENST00000550519 FLT1P17948 1338 aa26.58■■□□□ 1.85
SMARCC2-210ENST00000550519 LOC285556D6RIA3 1793 aa26.57■■□□□ 1.84
SMARCC2-210ENST00000550519 ASNSP08243 561 aa26.57■■□□□ 1.84
SMARCC2-210ENST00000550519 PIH1D3Q9NQM4 214 aaKnown RBP26.57■■□□□ 1.84
SMARCC2-210ENST00000550519 FARP2O94887 1054 aaPredicted RBP26.56■■□□□ 1.84
SMARCC2-210ENST00000550519 RLBP1P12271 317 aa26.56■■□□□ 1.84
SMARCC2-210ENST00000550519 CAPN2P17655 700 aa26.56■■□□□ 1.84
SMARCC2-210ENST00000550519 JAG1P78504 1218 aa26.56■■□□□ 1.84
SMARCC2-210ENST00000550519 FTSJ3Q8IY81 847 aaKnown RBP26.56■■□□□ 1.84
SMARCC2-210ENST00000550519 PAK6Q9NQU5 681 aaPredicted RBP26.56■■□□□ 1.84
SMARCC2-210ENST00000550519 TRIOBPQ9H2D6 2365 aa26.56■■□□□ 1.84
SMARCC2-210ENST00000550519 BACE1P56817 501 aa26.55■■□□□ 1.84
SMARCC2-210ENST00000550519 ITPRIPQ8IWB1 547 aa26.55■■□□□ 1.84
SMARCC2-210ENST00000550519 EAF2Q96CJ1 260 aaPredicted RBP26.55■■□□□ 1.84
SMARCC2-210ENST00000550519 TLR7Q9NYK1 1049 aaKnown RBP26.55■■□□□ 1.84
SMARCC2-210ENST00000550519 PALD1Q9ULE6 856 aa26.55■■□□□ 1.84
SMARCC2-210ENST00000550519 MAST2Q6P0Q8 1798 aa26.55■■□□□ 1.84
SMARCC2-210ENST00000550519 SIPA1L1O43166 1804 aa26.55■■□□□ 1.84
SMARCC2-210ENST00000550519 MTMR2Q13614 643 aa26.54■■□□□ 1.84
SMARCC2-210ENST00000550519 GINM1Q9NU53 330 aa26.54■■□□□ 1.84
SMARCC2-210ENST00000550519 MORF4L1Q9UBU8 362 aa26.54■■□□□ 1.84
SMARCC2-210ENST00000550519 GJD2Q9UKL4 321 aa26.54■■□□□ 1.84
SMARCC2-210ENST00000550519 TAOK2Q9UL54 1235 aa26.54■■□□□ 1.84
SMARCC2-210ENST00000550519 ATAD5Q96QE3 1844 aa26.53■■□□□ 1.84
SMARCC2-210ENST00000550519 DOCK3Q8IZD9 2030 aa26.53■■□□□ 1.84
SMARCC2-210ENST00000550519 HOXA7P31268 230 aaPredicted RBP26.53■■□□□ 1.84
SMARCC2-210ENST00000550519 HNRNPUQ00839 825 aaKnown RBP eCLIP26.53■■□□□ 1.84
SMARCC2-210ENST00000550519 CHRDL2Q6WN34 429 aa26.53■■□□□ 1.84
SMARCC2-210ENST00000550519 CRACR2BQ8N4Y2 399 aaPredicted RBP26.53■■□□□ 1.84
SMARCC2-210ENST00000550519 DEFB118Q96PH6 123 aa26.53■■□□□ 1.84
SMARCC2-210ENST00000550519 CCDC8Q9H0W5 538 aaPredicted RBP26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms