RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 POTEIP0CG38 1075 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 POTEJP0CG39 1038 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 SLURP2P0DP57 97 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 ANAPC15P60006 121 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
RAB5C-207ENST00000550504 AKNAD1Q5T1N1 836 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 PRAMEF18Q5VWM3 479 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 PNMA8AQ86V59 439 aaPredicted RBP12.2□□□□□ -0.46
RAB5C-207ENST00000550504 SLC44A5Q8NCS7 719 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 STAG1Q8WVM7 1258 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 CSRNP1Q96S65 589 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 DHX36Q9H2U1 1008 aaKnown RBP12.2□□□□□ -0.46
RAB5C-207ENST00000550504 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
RAB5C-207ENST00000550504 NEDD4P46934 1319 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 PITPNM2Q9BZ72 1349 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 FAM196BA6NMK8 535 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 ADM5C9JUS6 153 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 CPA1P15085 419 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-207ENST00000550504 KRT32Q14532 448 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 TSGA10IPQ3SY00 556 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 RALYLQ86SE5 291 aaKnown RBP12.19□□□□□ -0.46
RAB5C-207ENST00000550504 SULF1Q8IWU6 871 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 CRACR2BQ8N4Y2 399 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-207ENST00000550504 KIF2CQ99661 725 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
RAB5C-207ENST00000550504 RNF41Q9H4P4 317 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-207ENST00000550504 PI4KBQ9UBF8 816 aa12.19□□□□□ -0.46
RAB5C-207ENST00000550504 COL2A1P02458 1487 aaPredicted RBP12.19□□□□□ -0.46
RAB5C-207ENST00000550504 ATRNL1Q5VV63 1379 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 ROBO3Q96MS0 1386 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 CASTP20810 708 aaKnown RBP12.18□□□□□ -0.46
RAB5C-207ENST00000550504 PSMA5P28066 241 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 CDK8P49336 464 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 PDE4BQ07343 736 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 TRDNQ13061 729 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 C16orf86Q6ZW13 317 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 KRT26Q7Z3Y9 468 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 DNAJC5GQ8N7S2 189 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 NCOA7Q8NI08 942 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 NKX2-3Q8TAU0 364 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
RAB5C-207ENST00000550504 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 MKNK2Q9HBH9 465 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 SERPINB13Q9UIV8 391 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
RAB5C-207ENST00000550504 SIPA1L1O43166 1804 aa12.18□□□□□ -0.46
RAB5C-207ENST00000550504 POLR2AP24928 1970 aaKnown RBP12.18□□□□□ -0.46
RAB5C-207ENST00000550504 PCNTO95613 3336 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 B4E1Z4 1266 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 KDM4AO75164 1064 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 GABPAQ06546 454 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 NBPF12Q5TAG4 269 aaPredicted RBP12.17□□□□□ -0.46
RAB5C-207ENST00000550504 MAP1SQ66K74 1059 aaPredicted RBP12.17□□□□□ -0.46
RAB5C-207ENST00000550504 BLOC1S2Q6QNY1 142 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 MIGA2Q7L4E1 593 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 CHST3Q7LGC8 479 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 USP48Q86UV5 1035 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 FOXP4Q8IVH2 680 aaPredicted RBP12.17□□□□□ -0.46
RAB5C-207ENST00000550504 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 TEPSINQ96N21 525 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 KRT23Q9C075 422 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 EHD4Q9H223 541 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 CNNM2Q9H8M5 875 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
RAB5C-207ENST00000550504 PGAP2Q9UHJ9 254 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 PPP2R3BQ9Y5P8 575 aa12.17□□□□□ -0.46
RAB5C-207ENST00000550504 RANBP6O60518 1105 aaKnown RBP12.16□□□□□ -0.46
RAB5C-207ENST00000550504 FGRP09769 529 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 NEK4P51957 841 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 RABEP1Q15276 862 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 FAM47AQ5JRC9 791 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 CYB5R4Q7L1T6 521 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 ZNF444Q8N0Y2 327 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-207ENST00000550504 ESR2Q92731 530 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 IL17RAQ96F46 866 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 GLIS2Q9BZE0 524 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-207ENST00000550504 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 DNAJC18Q9H819 358 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 ZNF287Q9HBT7 754 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 SWAP70Q9UH65 585 aa12.16□□□□□ -0.46
RAB5C-207ENST00000550504 TSPY2A6NKD2 308 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 PRC1O43663 620 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 ORC4O43929 436 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
RAB5C-207ENST00000550504 RASA1P20936 1047 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 RPS6KB1P23443 525 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 SHMT1P34896 483 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 RUFY3Q7L099 469 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 LDHDQ86WU2 507 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 MB21D2Q8IYB1 491 aaPredicted RBP12.15□□□□□ -0.46
RAB5C-207ENST00000550504 ZKSCAN3Q9BRR0 538 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
RAB5C-207ENST00000550504 HERC5Q9UII4 1024 aaKnown RBP12.15□□□□□ -0.46
RAB5C-207ENST00000550504 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms