RNA–Protein interactions for RNA: ENST00000550455.5

CCT2-209, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-209ENST00000550455 SRGAP3O43295 1099 aa12.73□□□□□ -0.37
CCT2-209ENST00000550455 ARID4AP29374 1257 aaPredicted RBP12.73□□□□□ -0.37
CCT2-209ENST00000550455 CAP2P40123 477 aa12.73□□□□□ -0.37
CCT2-209ENST00000550455 PICALMQ13492 652 aa12.73□□□□□ -0.37
CCT2-209ENST00000550455 SPATA5Q8NB90 893 aa12.73□□□□□ -0.37
CCT2-209ENST00000550455 CDCA7LQ96GN5 454 aa12.73□□□□□ -0.37
CCT2-209ENST00000550455 MEIS3Q99687 375 aa12.73□□□□□ -0.37
CCT2-209ENST00000550455 DHX36Q9H2U1 1008 aaKnown RBP12.73□□□□□ -0.37
CCT2-209ENST00000550455 AS3MTQ9HBK9 375 aa12.73□□□□□ -0.37
CCT2-209ENST00000550455 HMG20BQ9P0W2 317 aa12.73□□□□□ -0.37
CCT2-209ENST00000550455 RANBP2P49792 3224 aaKnown RBP12.73□□□□□ -0.37
CCT2-209ENST00000550455 USP17L5A8MUK1 530 aa12.72□□□□□ -0.37
CCT2-209ENST00000550455 EVI5O60447 810 aa12.72□□□□□ -0.37
CCT2-209ENST00000550455 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
CCT2-209ENST00000550455 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
CCT2-209ENST00000550455 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
CCT2-209ENST00000550455 TFCP2Q12800 502 aa12.72□□□□□ -0.37
CCT2-209ENST00000550455 ANKRD13CQ8N6S4 541 aa12.72□□□□□ -0.37
CCT2-209ENST00000550455 ZNF384Q8TF68 577 aa12.72□□□□□ -0.37
CCT2-209ENST00000550455 WDR18Q9BV38 432 aa12.72□□□□□ -0.37
CCT2-209ENST00000550455 PI4KBQ9UBF8 816 aa12.72□□□□□ -0.37
CCT2-209ENST00000550455 IPO8O15397 1037 aaKnown RBP12.71□□□□□ -0.37
CCT2-209ENST00000550455 HMGCRP04035 888 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 ELNP15502 786 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 PLCG2P16885 1265 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 HOXA7P31268 230 aaPredicted RBP12.71□□□□□ -0.37
CCT2-209ENST00000550455 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
CCT2-209ENST00000550455 SPP2Q13103 211 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 TREML2Q5T2D2 321 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 GORABQ5T7V8 394 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 NECAB2Q7Z6G3 386 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 NEUROD6Q96NK8 337 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 DEFB118Q96PH6 123 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 GPR108Q9NPR9 543 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 MORF4L1Q9UBU8 362 aa12.71□□□□□ -0.37
CCT2-209ENST00000550455 LOC285556D6RIA3 1793 aa12.71□□□□□ -0.38
CCT2-209ENST00000550455 RPTORQ8N122 1335 aa12.7□□□□□ -0.38
CCT2-209ENST00000550455 C19orf81C9J6K1 198 aa12.7□□□□□ -0.38
CCT2-209ENST00000550455 BAG3O95817 575 aa12.7□□□□□ -0.38
CCT2-209ENST00000550455 ASNSP08243 561 aa12.7□□□□□ -0.38
CCT2-209ENST00000550455 BMP8BP34820 402 aa12.7□□□□□ -0.38
CCT2-209ENST00000550455 PPP4CP60510 307 aa12.7□□□□□ -0.38
CCT2-209ENST00000550455 METTL16Q86W50 562 aaKnown RBP12.7□□□□□ -0.38
CCT2-209ENST00000550455 FOXP4Q8IVH2 680 aaPredicted RBP12.7□□□□□ -0.38
CCT2-209ENST00000550455 TRMT44Q8IYL2 757 aaKnown RBP12.7□□□□□ -0.38
CCT2-209ENST00000550455 GTF3C2Q8WUA4 911 aaPredicted RBP12.7□□□□□ -0.38
CCT2-209ENST00000550455 NOL10Q9BSC4 688 aaKnown RBP12.7□□□□□ -0.38
CCT2-209ENST00000550455 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCT2-209ENST00000550455 GJD2Q9UKL4 321 aa12.7□□□□□ -0.38
CCT2-209ENST00000550455 SZT2Q5T011 3432 aa12.69□□□□□ -0.38
CCT2-209ENST00000550455 GNAI2P04899 355 aa12.69□□□□□ -0.38
CCT2-209ENST00000550455 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
CCT2-209ENST00000550455 BACE1P56817 501 aa12.69□□□□□ -0.38
CCT2-209ENST00000550455 G3BP1Q13283 466 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCT2-209ENST00000550455 TMED8Q6PL24 325 aaPredicted RBP12.69□□□□□ -0.38
CCT2-209ENST00000550455 CERS3Q8IU89 383 aa12.69□□□□□ -0.38
CCT2-209ENST00000550455 ZNF512BQ96KM6 892 aaPredicted RBP12.69□□□□□ -0.38
CCT2-209ENST00000550455 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
CCT2-209ENST00000550455 HMX1Q9NP08 348 aaPredicted RBP12.69□□□□□ -0.38
CCT2-209ENST00000550455 RAI14Q9P0K7 980 aa12.69□□□□□ -0.38
CCT2-209ENST00000550455 HMGCS2P54868 508 aa12.68□□□□□ -0.38
CCT2-209ENST00000550455 TEX11Q8IYF3 940 aa12.68□□□□□ -0.38
CCT2-209ENST00000550455 SOCS4Q8WXH5 440 aa12.68□□□□□ -0.38
CCT2-209ENST00000550455 PAWRQ96IZ0 340 aaKnown RBP12.68□□□□□ -0.38
CCT2-209ENST00000550455 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
CCT2-209ENST00000550455 LRP2BPQ9P2M1 347 aa12.68□□□□□ -0.38
CCT2-209ENST00000550455 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
CCT2-209ENST00000550455 MCAMP43121 646 aa12.67□□□□□ -0.38
CCT2-209ENST00000550455 CCDC158Q5M9N0 1113 aa12.67□□□□□ -0.38
CCT2-209ENST00000550455 MAP3K21Q5TCX8 1036 aa12.67□□□□□ -0.38
CCT2-209ENST00000550455 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
CCT2-209ENST00000550455 GDF15Q99988 308 aa12.67□□□□□ -0.38
CCT2-209ENST00000550455 TMOD4Q9NZQ9 345 aa12.67□□□□□ -0.38
CCT2-209ENST00000550455 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
CCT2-209ENST00000550455 FAM196BA6NMK8 535 aa12.66□□□□□ -0.38
CCT2-209ENST00000550455 USP17L10C9JJH3 530 aa12.66□□□□□ -0.38
CCT2-209ENST00000550455 MAPK4P31152 587 aa12.66□□□□□ -0.38
CCT2-209ENST00000550455 IRX3P78415 501 aaPredicted RBP12.66□□□□□ -0.38
CCT2-209ENST00000550455 NAA16Q6N069 864 aaPredicted RBP12.66□□□□□ -0.38
CCT2-209ENST00000550455 TBC1D9Q6ZT07 1266 aa12.66□□□□□ -0.38
CCT2-209ENST00000550455 CCDC84Q86UT8 332 aaPredicted RBP12.66□□□□□ -0.38
CCT2-209ENST00000550455 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
CCT2-209ENST00000550455 NUDT12Q9BQG2 462 aa12.66□□□□□ -0.38
CCT2-209ENST00000550455 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.66□□□□□ -0.38
CCT2-209ENST00000550455 ATAD5Q96QE3 1844 aa12.65□□□□□ -0.38
CCT2-209ENST00000550455 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
CCT2-209ENST00000550455 TRIM27P14373 513 aa12.65□□□□□ -0.38
CCT2-209ENST00000550455 HERVK_113P62684 666 aa12.65□□□□□ -0.38
CCT2-209ENST00000550455 RRP1BQ14684 758 aaKnown RBP12.65□□□□□ -0.38
CCT2-209ENST00000550455 PI16Q6UXB8 463 aa12.65□□□□□ -0.38
CCT2-209ENST00000550455 SH3RF3Q8TEJ3 882 aaPredicted RBP12.65□□□□□ -0.38
CCT2-209ENST00000550455 TAOK2Q9UL54 1235 aa12.65□□□□□ -0.38
CCT2-209ENST00000550455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.65□□□□□ -0.38
CCT2-209ENST00000550455 DOCK3Q8IZD9 2030 aa12.65□□□□□ -0.38
CCT2-209ENST00000550455 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
CCT2-209ENST00000550455 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
CCT2-209ENST00000550455 MNX1P50219 401 aaPredicted RBP12.64□□□□□ -0.39
CCT2-209ENST00000550455 MTMR2Q13614 643 aa12.64□□□□□ -0.39
CCT2-209ENST00000550455 POLA2Q14181 598 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms