RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 EPHX2P34913 555 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
CACNB3-216ENST00000550391 NFIAQ12857 509 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 PICALMQ13492 652 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 KIF4BQ2VIQ3 1234 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 NBPF9Q3BBW0 867 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 STOX1Q6ZVD7 989 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 SAMD7Q7Z3H4 446 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 AMOTL1Q8IY63 956 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 IL27Q8NEV9 243 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 TMOD2Q9NZR1 351 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 FAM198AQ9UFP1 575 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 E7EWF7 191 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 MYO1BO43795 1136 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 EPS15P42566 896 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 CACNB3P54284 484 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 CTDSPL2Q05D32 466 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 TBC1D10BQ4KMP7 808 aaPredicted RBP16.73■□□□□ 0.27
CACNB3-216ENST00000550391 RBM26Q5T8P6 1007 aaKnown RBP16.73■□□□□ 0.27
CACNB3-216ENST00000550391 C12orf60Q5U649 245 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 MAP1SQ66K74 1059 aaPredicted RBP16.73■□□□□ 0.27
CACNB3-216ENST00000550391 CYP4F22Q6NT55 531 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 TBC1D10CQ8IV04 446 aa16.73■□□□□ 0.27
CACNB3-216ENST00000550391 JAKMIP1Q96N16 626 aaKnown RBP16.73■□□□□ 0.27
CACNB3-216ENST00000550391 OSBPL5Q9H0X9 879 aaPredicted RBP16.73■□□□□ 0.27
CACNB3-216ENST00000550391 CLRN2A0PK11 232 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 SMIM22K7EJ46 135 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 ENTPD3O75355 529 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 POLR3DP05423 398 aaPredicted RBP16.72■□□□□ 0.27
CACNB3-216ENST00000550391 SLC3A2P08195 630 aaKnown RBP16.72■□□□□ 0.27
CACNB3-216ENST00000550391 CYP2D6P10635 497 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 EVX2Q03828 476 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 GRM1Q13255 1194 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 STAG1Q8WVM7 1258 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 SAP30BPQ9UHR5 308 aaKnown RBP16.72■□□□□ 0.27
CACNB3-216ENST00000550391 TACC3Q9Y6A5 838 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
CACNB3-216ENST00000550391 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
CACNB3-216ENST00000550391 LMOD1P29536 600 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-216ENST00000550391 PLCD1P51178 756 aa16.71■□□□□ 0.27
CACNB3-216ENST00000550391 SOX10P56693 466 aa16.71■□□□□ 0.27
CACNB3-216ENST00000550391 AKNAD1Q5T1N1 836 aa16.71■□□□□ 0.27
CACNB3-216ENST00000550391 FKBP1CQ5VVH2 108 aa16.71■□□□□ 0.27
CACNB3-216ENST00000550391 ZFPM1Q8IX07 1006 aa16.71■□□□□ 0.27
CACNB3-216ENST00000550391 TRPM4Q8TD43 1214 aa16.71■□□□□ 0.27
CACNB3-216ENST00000550391 NEK1Q96PY6 1258 aa16.71■□□□□ 0.27
CACNB3-216ENST00000550391 RNF41Q9H4P4 317 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-216ENST00000550391 COL2A1P02458 1487 aaPredicted RBP16.71■□□□□ 0.27
CACNB3-216ENST00000550391 FGRP09769 529 aa16.7■□□□□ 0.26
CACNB3-216ENST00000550391 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
CACNB3-216ENST00000550391 NEK4P51957 841 aa16.7■□□□□ 0.26
CACNB3-216ENST00000550391 TCP10Q12799 353 aa16.7■□□□□ 0.26
CACNB3-216ENST00000550391 TRDNQ13061 729 aa16.7■□□□□ 0.26
CACNB3-216ENST00000550391 BLOC1S2Q6QNY1 142 aa16.7■□□□□ 0.26
CACNB3-216ENST00000550391 TTC6Q86TZ1 520 aa16.7■□□□□ 0.26
CACNB3-216ENST00000550391 DHX36Q9H2U1 1008 aaKnown RBP16.7■□□□□ 0.26
CACNB3-216ENST00000550391 ADARB2Q9NS39 739 aaKnown RBP16.7■□□□□ 0.26
CACNB3-216ENST00000550391 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
CACNB3-216ENST00000550391 NEDD4P46934 1319 aa16.7■□□□□ 0.26
CACNB3-216ENST00000550391 ATRNL1Q5VV63 1379 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 SIPA1L1O43166 1804 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 TCP10L2B9ZVM9 353 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 PCP11498 1178 aaKnown RBP16.69■□□□□ 0.26
CACNB3-216ENST00000550391 HIRAP54198 1017 aaPredicted RBP16.69■□□□□ 0.26
CACNB3-216ENST00000550391 COL9A3Q14050 684 aaPredicted RBP16.69■□□□□ 0.26
CACNB3-216ENST00000550391 SLC4A8Q2Y0W8 1093 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 MFSD6Q6ZSS7 791 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 SH3BP5LQ7L8J4 393 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 FAM83AQ86UY5 434 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 NCOA7Q8NI08 942 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
CACNB3-216ENST00000550391 CNNM2Q9H8M5 875 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 INCENPQ9NQS7 918 aa16.69■□□□□ 0.26
CACNB3-216ENST00000550391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNB3-216ENST00000550391 ASTN2O75129 1339 aaPredicted RBP16.69■□□□□ 0.26
CACNB3-216ENST00000550391 DDTLA6NHG4 134 aaPredicted RBP16.68■□□□□ 0.26
CACNB3-216ENST00000550391 ST18O60284 1047 aa16.68■□□□□ 0.26
CACNB3-216ENST00000550391 CPA1P15085 419 aa16.68■□□□□ 0.26
CACNB3-216ENST00000550391 RPS6KB1P23443 525 aa16.68■□□□□ 0.26
CACNB3-216ENST00000550391 RALYLQ86SE5 291 aaKnown RBP16.68■□□□□ 0.26
CACNB3-216ENST00000550391 MB21D2Q8IYB1 491 aaPredicted RBP16.68■□□□□ 0.26
CACNB3-216ENST00000550391 KRT23Q9C075 422 aa16.68■□□□□ 0.26
CACNB3-216ENST00000550391 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
CACNB3-216ENST00000550391 ORC4O43929 436 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 HLA-DOAP06340 250 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 GABPAQ06546 454 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 PDE4BQ07343 736 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 DHX32Q7L7V1 743 aaKnown RBP16.67■□□□□ 0.26
CACNB3-216ENST00000550391 STK11IPQ8N1F8 1099 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 NKX2-3Q8TAU0 364 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 SNX21Q969T3 373 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 DYNLL2Q96FJ2 89 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 TTC14Q96N46 770 aa16.67■□□□□ 0.26
CACNB3-216ENST00000550391 EHD4Q9H223 541 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms