RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 FLT3LGP49771 235 aa15.56■□□□□ 0.08
LETMD1-222ENST00000550274 TREML2Q5T2D2 321 aa15.56■□□□□ 0.08
LETMD1-222ENST00000550274 TBC1D9Q6ZT07 1266 aa15.56■□□□□ 0.08
LETMD1-222ENST00000550274 SMCR8Q8TEV9 937 aaPredicted RBP15.56■□□□□ 0.08
LETMD1-222ENST00000550274 U2AF1L4Q8WU68 220 aaKnown RBP15.56■□□□□ 0.08
LETMD1-222ENST00000550274 NEUROD6Q96NK8 337 aa15.56■□□□□ 0.08
LETMD1-222ENST00000550274 AGTPBP1Q9UPW5 1226 aa15.56■□□□□ 0.08
LETMD1-222ENST00000550274 TNNQ9UQP3 1299 aa15.56■□□□□ 0.08
LETMD1-222ENST00000550274 MYH1P12882 1939 aa15.56■□□□□ 0.08
LETMD1-222ENST00000550274 TNPO2O14787 897 aaKnown RBP15.55■□□□□ 0.08
LETMD1-222ENST00000550274 TBC1D12O60347 775 aa15.55■□□□□ 0.08
LETMD1-222ENST00000550274 INHAP05111 366 aa15.55■□□□□ 0.08
LETMD1-222ENST00000550274 SPATA5Q8NB90 893 aa15.55■□□□□ 0.08
LETMD1-222ENST00000550274 ARHGAP45Q92619 1136 aa15.55■□□□□ 0.08
LETMD1-222ENST00000550274 NSUN4Q96CB9 384 aaKnown RBP15.55■□□□□ 0.08
LETMD1-222ENST00000550274 FARP2O94887 1054 aaPredicted RBP15.54■□□□□ 0.08
LETMD1-222ENST00000550274 RRP1BQ14684 758 aaKnown RBP15.54■□□□□ 0.08
LETMD1-222ENST00000550274 ANKRD13CQ8N6S4 541 aa15.54■□□□□ 0.08
LETMD1-222ENST00000550274 OSBPL5Q9H0X9 879 aaPredicted RBP15.54■□□□□ 0.08
LETMD1-222ENST00000550274 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.54■□□□□ 0.08
LETMD1-222ENST00000550274 RBM27Q9P2N5 1060 aaKnown RBP15.54■□□□□ 0.08
LETMD1-222ENST00000550274 PNMA6EA0A0J9YXQ4 647 aa15.53■□□□□ 0.08
LETMD1-222ENST00000550274 SGPL1O95470 568 aa15.53■□□□□ 0.08
LETMD1-222ENST00000550274 TRIM27P14373 513 aa15.53■□□□□ 0.08
LETMD1-222ENST00000550274 ARID4AP29374 1257 aaPredicted RBP15.53■□□□□ 0.08
LETMD1-222ENST00000550274 MCAMP43121 646 aa15.53■□□□□ 0.08
LETMD1-222ENST00000550274 SPP2Q13103 211 aa15.53■□□□□ 0.08
LETMD1-222ENST00000550274 IRF5Q13568 498 aa15.53■□□□□ 0.08
LETMD1-222ENST00000550274 PXYLP1Q8TE99 480 aa15.53■□□□□ 0.08
LETMD1-222ENST00000550274 HTATIP2Q9BUP3 242 aa15.53■□□□□ 0.08
LETMD1-222ENST00000550274 DDX60LQ5H9U9 1706 aaKnown RBP15.53■□□□□ 0.08
LETMD1-222ENST00000550274 LDHCP07864 332 aa15.52■□□□□ 0.08
LETMD1-222ENST00000550274 GSTO1P78417 241 aa15.52■□□□□ 0.08
LETMD1-222ENST00000550274 FAM110CQ1W6H9 321 aa15.52■□□□□ 0.08
LETMD1-222ENST00000550274 GORABQ5T7V8 394 aa15.52■□□□□ 0.08
LETMD1-222ENST00000550274 PROCA1Q8NCQ7 364 aaPredicted RBP15.52■□□□□ 0.08
LETMD1-222ENST00000550274 PRO3102Q9H379 93 aa15.52■□□□□ 0.08
LETMD1-222ENST00000550274 RAI14Q9P0K7 980 aa15.52■□□□□ 0.08
LETMD1-222ENST00000550274 TAOK2Q9UL54 1235 aa15.52■□□□□ 0.08
LETMD1-222ENST00000550274 COL6A3P12111 3177 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 MAP4K4O95819 1239 aaPredicted RBP15.51■□□□□ 0.07
LETMD1-222ENST00000550274 GNAI2P04899 355 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 CAP2P40123 477 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 HMGCS2P54868 508 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 TEX11Q8IYF3 940 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 ZNF280CQ8ND82 737 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 SH3RF3Q8TEJ3 882 aaPredicted RBP15.51■□□□□ 0.07
LETMD1-222ENST00000550274 DEFB118Q96PH6 123 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 PAK6Q9NQU5 681 aaPredicted RBP15.51■□□□□ 0.07
LETMD1-222ENST00000550274 PNMA3Q9UL41 463 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 FRMPD3Q5JV73 1810 aa15.51■□□□□ 0.07
LETMD1-222ENST00000550274 ZBTB7BO15156 539 aaPredicted RBP15.5■□□□□ 0.07
LETMD1-222ENST00000550274 COA7Q96BR5 231 aa15.5■□□□□ 0.07
LETMD1-222ENST00000550274 BCAR3O75815 825 aa15.49■□□□□ 0.07
LETMD1-222ENST00000550274 G3BP1Q13283 466 aaKnown RBP eCLIP15.49■□□□□ 0.07
LETMD1-222ENST00000550274 ATF7IPQ6VMQ6 1270 aa15.49■□□□□ 0.07
LETMD1-222ENST00000550274 FRAT1Q92837 279 aaPredicted RBP15.49■□□□□ 0.07
LETMD1-222ENST00000550274 CLUAP1Q96AJ1 413 aa15.49■□□□□ 0.07
LETMD1-222ENST00000550274 CRISPLD2Q9H0B8 497 aa15.49■□□□□ 0.07
LETMD1-222ENST00000550274 ASCC2Q9H1I8 757 aaPredicted RBP15.49■□□□□ 0.07
LETMD1-222ENST00000550274 RNF39Q9H2S5 420 aa15.49■□□□□ 0.07
LETMD1-222ENST00000550274 SNRKQ9NRH2 765 aa15.49■□□□□ 0.07
LETMD1-222ENST00000550274 LRP2BPQ9P2M1 347 aa15.49■□□□□ 0.07
LETMD1-222ENST00000550274 DNAH12Q6ZR08 3092 aa15.49■□□□□ 0.07
LETMD1-222ENST00000550274 USP17L5A8MUK1 530 aa15.48■□□□□ 0.07
LETMD1-222ENST00000550274 TFRCP02786 760 aaKnown RBP15.48■□□□□ 0.07
LETMD1-222ENST00000550274 UQCRFS1P1P0C7P4 283 aa15.48■□□□□ 0.07
LETMD1-222ENST00000550274 GCLCP48506 637 aaPredicted RBP15.48■□□□□ 0.07
LETMD1-222ENST00000550274 JAG1P78504 1218 aa15.48■□□□□ 0.07
LETMD1-222ENST00000550274 SHROOM1Q2M3G4 852 aaPredicted RBP15.48■□□□□ 0.07
LETMD1-222ENST00000550274 SH3D19Q5HYK7 790 aa15.48■□□□□ 0.07
LETMD1-222ENST00000550274 ADGRA1Q86SQ6 560 aa15.48■□□□□ 0.07
LETMD1-222ENST00000550274 TBC1D2Q9BYX2 928 aa15.48■□□□□ 0.07
LETMD1-222ENST00000550274 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.48■□□□□ 0.07
LETMD1-222ENST00000550274 DNAJC18Q9H819 358 aa15.48■□□□□ 0.07
LETMD1-222ENST00000550274 AATFQ9NY61 560 aaKnown RBP eCLIP15.48■□□□□ 0.07
LETMD1-222ENST00000550274 HERC5Q9UII4 1024 aaKnown RBP15.48■□□□□ 0.07
LETMD1-222ENST00000550274 NR2E3Q9Y5X4 410 aa15.48■□□□□ 0.07
LETMD1-222ENST00000550274 IPO8O15397 1037 aaKnown RBP15.47■□□□□ 0.07
LETMD1-222ENST00000550274 NAA16Q6N069 864 aaPredicted RBP15.47■□□□□ 0.07
LETMD1-222ENST00000550274 DIS3LQ8TF46 1054 aaKnown RBP15.47■□□□□ 0.07
LETMD1-222ENST00000550274 PAWRQ96IZ0 340 aaKnown RBP15.47■□□□□ 0.07
LETMD1-222ENST00000550274 DBNDD2Q9BQY9 259 aa15.47■□□□□ 0.07
LETMD1-222ENST00000550274 PI4KBQ9UBF8 816 aa15.47■□□□□ 0.07
LETMD1-222ENST00000550274 GJD2Q9UKL4 321 aa15.47■□□□□ 0.07
LETMD1-222ENST00000550274 EVI5O60447 810 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 PEX10O60683 326 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 CYP2E1P05181 493 aaPredicted RBP15.46■□□□□ 0.07
LETMD1-222ENST00000550274 TRIM32Q13049 653 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 PABPC4Q13310 644 aaKnown RBP eCLIP15.46■□□□□ 0.074e-7■■■■□ 24.1
LETMD1-222ENST00000550274 MTMR2Q13614 643 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 TNNI3KQ59H18 835 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 MAPKAPK5Q8IW41 473 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 TMEM57Q8N5G2 664 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 NOL10Q9BSC4 688 aaKnown RBP15.46■□□□□ 0.07
LETMD1-222ENST00000550274 AS3MTQ9HBK9 375 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 FPGT-TNNI3KV9GXZ4 949 aa15.46■□□□□ 0.07
LETMD1-222ENST00000550274 NAV1Q8NEY1 1877 aa15.46■□□□□ 0.06
LETMD1-222ENST00000550274 FLT1P17948 1338 aa15.45■□□□□ 0.06
LETMD1-222ENST00000550274 CCER2I3L3R5 266 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms