RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 AKAP2Q9Y2D5 859 aa20.35■□□□□ 0.85
SSH1-208ENST00000548522 LOC285556D6RIA3 1793 aa20.34■□□□□ 0.85
SSH1-208ENST00000548522 ZBTB7BO15156 539 aaPredicted RBP20.34■□□□□ 0.85
SSH1-208ENST00000548522 TBC1D12O60347 775 aa20.34■□□□□ 0.85
SSH1-208ENST00000548522 HMGCS2P54868 508 aa20.34■□□□□ 0.85
SSH1-208ENST00000548522 PXYLP1Q8TE99 480 aa20.34■□□□□ 0.85
SSH1-208ENST00000548522 PAK6Q9NQU5 681 aaPredicted RBP20.34■□□□□ 0.85
SSH1-208ENST00000548522 HDAC5Q9UQL6 1122 aa20.34■□□□□ 0.85
SSH1-208ENST00000548522 COL2A1P02458 1487 aaPredicted RBP20.33■□□□□ 0.85
SSH1-208ENST00000548522 PNMA6EA0A0J9YXQ4 647 aa20.33■□□□□ 0.85
SSH1-208ENST00000548522 NPM3O75607 178 aaKnown RBP20.33■□□□□ 0.85
SSH1-208ENST00000548522 GNAI3P08754 354 aa20.33■□□□□ 0.85
SSH1-208ENST00000548522 MCAMP43121 646 aa20.33■□□□□ 0.85
SSH1-208ENST00000548522 FAM110CQ1W6H9 321 aa20.33■□□□□ 0.85
SSH1-208ENST00000548522 DIS3LQ8TF46 1054 aaKnown RBP20.33■□□□□ 0.85
SSH1-208ENST00000548522 RAI14Q9P0K7 980 aa20.33■□□□□ 0.85
SSH1-208ENST00000548522 COL6A3P12111 3177 aa20.32■□□□□ 0.84
SSH1-208ENST00000548522 TFRCP02786 760 aaKnown RBP20.32■□□□□ 0.84
SSH1-208ENST00000548522 ARID4AP29374 1257 aaPredicted RBP20.32■□□□□ 0.84
SSH1-208ENST00000548522 SHROOM1Q2M3G4 852 aaPredicted RBP20.32■□□□□ 0.84
SSH1-208ENST00000548522 PROCA1Q8NCQ7 364 aaPredicted RBP20.32■□□□□ 0.84
SSH1-208ENST00000548522 ZNF280CQ8ND82 737 aa20.32■□□□□ 0.84
SSH1-208ENST00000548522 SH3RF3Q8TEJ3 882 aaPredicted RBP20.32■□□□□ 0.84
SSH1-208ENST00000548522 PEX10O60683 326 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 TRIM27P14373 513 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 CAP2P40123 477 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 JAG1P78504 1218 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 TRIM32Q13049 653 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 GORABQ5T7V8 394 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 TEX11Q8IYF3 940 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 COA7Q96BR5 231 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 CRISPLD2Q9H0B8 497 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 PNMA3Q9UL41 463 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 NR2E3Q9Y5X4 410 aa20.31■□□□□ 0.84
SSH1-208ENST00000548522 SIPA1L1O43166 1804 aa20.3■□□□□ 0.84
SSH1-208ENST00000548522 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
SSH1-208ENST00000548522 GSTO1P78417 241 aa20.3■□□□□ 0.84
SSH1-208ENST00000548522 ARHGAP45Q92619 1136 aa20.3■□□□□ 0.84
SSH1-208ENST00000548522 PAWRQ96IZ0 340 aaKnown RBP20.3■□□□□ 0.84
SSH1-208ENST00000548522 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.3■□□□□ 0.84
SSH1-208ENST00000548522 ASCC2Q9H1I8 757 aaPredicted RBP20.3■□□□□ 0.84
SSH1-208ENST00000548522 SNRKQ9NRH2 765 aa20.3■□□□□ 0.84
SSH1-208ENST00000548522 SOX1O00570 391 aaPredicted RBP20.29■□□□□ 0.84
SSH1-208ENST00000548522 EVI5O60447 810 aa20.29■□□□□ 0.84
SSH1-208ENST00000548522 ADGRA1Q86SQ6 560 aa20.29■□□□□ 0.84
SSH1-208ENST00000548522 DNAJC18Q9H819 358 aa20.29■□□□□ 0.84
SSH1-208ENST00000548522 ATAD5Q96QE3 1844 aa20.29■□□□□ 0.84
SSH1-208ENST00000548522 DOCK3Q8IZD9 2030 aa20.28■□□□□ 0.84
SSH1-208ENST00000548522 LDHCP07864 332 aa20.28■□□□□ 0.84
SSH1-208ENST00000548522 MTMR2Q13614 643 aa20.28■□□□□ 0.84
SSH1-208ENST00000548522 CLUAP1Q96AJ1 413 aa20.28■□□□□ 0.84
SSH1-208ENST00000548522 AATFQ9NY61 560 aaKnown RBP eCLIP20.28■□□□□ 0.84
SSH1-208ENST00000548522 LRP2BPQ9P2M1 347 aa20.28■□□□□ 0.84
SSH1-208ENST00000548522 GJD2Q9UKL4 321 aa20.28■□□□□ 0.84
SSH1-208ENST00000548522 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
SSH1-208ENST00000548522 BCAR3O75815 825 aa20.27■□□□□ 0.84
SSH1-208ENST00000548522 GNAI2P04899 355 aa20.27■□□□□ 0.84
SSH1-208ENST00000548522 GCLCP48506 637 aaPredicted RBP20.27■□□□□ 0.84
SSH1-208ENST00000548522 STAP2Q9UGK3 403 aa20.27■□□□□ 0.84
SSH1-208ENST00000548522 ALPK3Q96L96 1907 aa20.27■□□□□ 0.84
SSH1-208ENST00000548522 MAST2Q6P0Q8 1798 aa20.26■□□□□ 0.83
SSH1-208ENST00000548522 MAP4K4O95819 1239 aaPredicted RBP20.26■□□□□ 0.83
SSH1-208ENST00000548522 HMGCRP04035 888 aa20.26■□□□□ 0.83
SSH1-208ENST00000548522 SH3D19Q5HYK7 790 aa20.26■□□□□ 0.83
SSH1-208ENST00000548522 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
SSH1-208ENST00000548522 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
SSH1-208ENST00000548522 HERC5Q9UII4 1024 aaKnown RBP20.26■□□□□ 0.83
SSH1-208ENST00000548522 FLT1P17948 1338 aa20.26■□□□□ 0.83
SSH1-208ENST00000548522 GDF11O95390 407 aa20.25■□□□□ 0.83
SSH1-208ENST00000548522 MNX1P50219 401 aaPredicted RBP20.25■□□□□ 0.83
SSH1-208ENST00000548522 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.83
SSH1-208ENST00000548522 TRIB2Q92519 343 aa20.25■□□□□ 0.83
SSH1-208ENST00000548522 LRCH3Q96II8 777 aa20.25■□□□□ 0.83
SSH1-208ENST00000548522 DBNDD2Q9BQY9 259 aa20.25■□□□□ 0.83
SSH1-208ENST00000548522 TXNRD2Q9NNW7 524 aa20.25■□□□□ 0.83
SSH1-208ENST00000548522 A0A0C4DFX4 3053 aa20.24■□□□□ 0.83
SSH1-208ENST00000548522 UQCRFS1P1P0C7P4 283 aa20.24■□□□□ 0.83
SSH1-208ENST00000548522 PABPC4Q13310 644 aaKnown RBP eCLIP20.24■□□□□ 0.83
SSH1-208ENST00000548522 NAA16Q6N069 864 aaPredicted RBP20.24■□□□□ 0.83
SSH1-208ENST00000548522 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
SSH1-208ENST00000548522 TGFBRAP1Q8WUH2 860 aa20.24■□□□□ 0.83
SSH1-208ENST00000548522 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
SSH1-208ENST00000548522 PI4KBQ9UBF8 816 aa20.24■□□□□ 0.83
SSH1-208ENST00000548522 MORF4L1Q9UBU8 362 aa20.24■□□□□ 0.83
SSH1-208ENST00000548522 PLXNB2O15031 1838 aa20.24■□□□□ 0.83
SSH1-208ENST00000548522 CYP2E1P05181 493 aaPredicted RBP20.23■□□□□ 0.83
SSH1-208ENST00000548522 BACE1P56817 501 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 TNNI3KQ59H18 835 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 TTC39AQ5SRH9 613 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 NECAB2Q7Z6G3 386 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 C7orf61Q8IZ16 206 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 P2RX7Q99572 595 aaKnown RBP20.23■□□□□ 0.83
SSH1-208ENST00000548522 WDR18Q9BV38 432 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 AS3MTQ9HBK9 375 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 SAP30BPQ9UHR5 308 aaKnown RBP20.23■□□□□ 0.83
SSH1-208ENST00000548522 PALD1Q9ULE6 856 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 ZMYND8Q9ULU4 1186 aaPredicted RBP20.23■□□□□ 0.83
SSH1-208ENST00000548522 FPGT-TNNI3KV9GXZ4 949 aa20.23■□□□□ 0.83
SSH1-208ENST00000548522 CYP2B6P20813 491 aa20.22■□□□□ 0.83
SSH1-208ENST00000548522 IRX3P78415 501 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms