RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 RFX7Q2KHR2 1363 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 ZBTB7BO15156 539 aaPredicted RBP14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 PEX10O60683 326 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 GNAI3P08754 354 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 RARSP54136 660 aaKnown RBP14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 TEX11Q8IYF3 940 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 PXYLP1Q8TE99 480 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 FRAT1Q92837 279 aaPredicted RBP14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 NSUN4Q96CB9 384 aaKnown RBP14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 PAWRQ96IZ0 340 aaKnown RBP14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 SNRKQ9NRH2 765 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 LRP2BPQ9P2M1 347 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 STAP2Q9UGK3 403 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 PLXNB2O15031 1838 aa14.75□□□□□ -0.05
TRAFD1-205ENST00000548277 TBC1D12O60347 775 aa14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 GSTO1P78417 241 aa14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 TRIM32Q13049 653 aa14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 ZNF280CQ8ND82 737 aa14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 SH3RF3Q8TEJ3 882 aaPredicted RBP14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 DIS3LQ8TF46 1054 aaKnown RBP14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 CLUAP1Q96AJ1 413 aa14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 OSBPL5Q9H0X9 879 aaPredicted RBP14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 PNMA3Q9UL41 463 aa14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 LOC285556D6RIA3 1793 aa14.74□□□□□ -0.05
TRAFD1-205ENST00000548277 MYH1P12882 1939 aa14.73□□□□□ -0.05
TRAFD1-205ENST00000548277 PNMA6EA0A0J9YXQ4 647 aa14.73□□□□□ -0.05
TRAFD1-205ENST00000548277 USP17L5A8MUK1 530 aa14.73□□□□□ -0.05
TRAFD1-205ENST00000548277 CAP2P40123 477 aa14.73□□□□□ -0.05
TRAFD1-205ENST00000548277 MCAMP43121 646 aa14.73□□□□□ -0.05
TRAFD1-205ENST00000548277 IRF5Q13568 498 aa14.73□□□□□ -0.05
TRAFD1-205ENST00000548277 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
TRAFD1-205ENST00000548277 SIPA1L1O43166 1804 aa14.73□□□□□ -0.05
TRAFD1-205ENST00000548277 PDS5AQ29RF7 1337 aaKnown RBP14.72□□□□□ -0.05
TRAFD1-205ENST00000548277 CT47B1P0C2W7 299 aaPredicted RBP14.72□□□□□ -0.05
TRAFD1-205ENST00000548277 FAM110CQ1W6H9 321 aa14.72□□□□□ -0.05
TRAFD1-205ENST00000548277 MAPKAPK5Q8IW41 473 aa14.72□□□□□ -0.05
TRAFD1-205ENST00000548277 PROCA1Q8NCQ7 364 aaPredicted RBP14.72□□□□□ -0.05
TRAFD1-205ENST00000548277 NOL10Q9BSC4 688 aaKnown RBP14.72□□□□□ -0.05
TRAFD1-205ENST00000548277 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRAFD1-205ENST00000548277 ASCC2Q9H1I8 757 aaPredicted RBP14.72□□□□□ -0.05
TRAFD1-205ENST00000548277 BCAR3O75815 825 aa14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 GNAI2P04899 355 aa14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 CYP2B6P20813 491 aa14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 SHROOM1Q2M3G4 852 aaPredicted RBP14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 C7orf61Q8IZ16 206 aa14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 TGFBRAP1Q8WUH2 860 aa14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 LRCH3Q96II8 777 aa14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 AS3MTQ9HBK9 375 aa14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 PAK6Q9NQU5 681 aaPredicted RBP14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 ZMYND8Q9ULU4 1186 aaPredicted RBP14.71□□□□□ -0.05
TRAFD1-205ENST00000548277 FOCADQ5VW36 1801 aa14.71□□□□□ -0.06
TRAFD1-205ENST00000548277 SZT2Q5T011 3432 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 DDX60LQ5H9U9 1706 aaKnown RBP14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 SOX1O00570 391 aaPredicted RBP14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 ZBTB22O15209 634 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 ARID4AP29374 1257 aaPredicted RBP14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 GCLCP48506 637 aaPredicted RBP14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 JAG1P78504 1218 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 PABPC4Q13310 644 aaKnown RBP eCLIP14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 MTMR2Q13614 643 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 TTC39AQ5SRH9 613 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 NAA16Q6N069 864 aaPredicted RBP14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 NECAB2Q7Z6G3 386 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 ARHGAP45Q92619 1136 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 P2RX7Q99572 595 aaKnown RBP14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 TRIM34Q9BYJ4 488 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 CRISPLD2Q9H0B8 497 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 PRO3102Q9H379 93 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 SAP30BPQ9UHR5 308 aaKnown RBP14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 GJD2Q9UKL4 321 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 PALD1Q9ULE6 856 aa14.7□□□□□ -0.06
TRAFD1-205ENST00000548277 NPM3O75607 178 aaKnown RBP14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 GDF11O95390 407 aa14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 UQCRFS1P1P0C7P4 283 aa14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 TRIM27P14373 513 aa14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 SYN1P17600 705 aa14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 IRX3P78415 501 aaPredicted RBP14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 OS9Q13438 667 aaPredicted RBP14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 MTX1Q13505 466 aa14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 DBNDD2Q9BQY9 259 aa14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 HMX1Q9NP08 348 aaPredicted RBP14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 TMOD4Q9NZQ9 345 aa14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 PI4KBQ9UBF8 816 aa14.69□□□□□ -0.06
TRAFD1-205ENST00000548277 IPO8O15397 1037 aaKnown RBP14.68□□□□□ -0.06
TRAFD1-205ENST00000548277 BAG3O95817 575 aa14.68□□□□□ -0.06
TRAFD1-205ENST00000548277 HMGCRP04035 888 aa14.68□□□□□ -0.06
TRAFD1-205ENST00000548277 DYNLL1P63167 89 aaKnown RBP14.68□□□□□ -0.06
TRAFD1-205ENST00000548277 SH3D19Q5HYK7 790 aa14.68□□□□□ -0.06
TRAFD1-205ENST00000548277 ADGRA1Q86SQ6 560 aa14.68□□□□□ -0.06
TRAFD1-205ENST00000548277 CRACR2BQ8N4Y2 399 aaPredicted RBP14.68□□□□□ -0.06
TRAFD1-205ENST00000548277 HERC5Q9UII4 1024 aaKnown RBP14.68□□□□□ -0.06
TRAFD1-205ENST00000548277 RPTORQ8N122 1335 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 MAP4K4O95819 1239 aaPredicted RBP14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 BACE1P56817 501 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 ZYXQ15942 572 aaKnown RBP14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 Q3C1V9 767 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 CCDC158Q5M9N0 1113 aa14.67□□□□□ -0.06
TRAFD1-205ENST00000548277 ATF7IPQ6VMQ6 1270 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms