RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 CEP290O15078 2479 aa15.27■□□□□ 0.04
GCN1-204ENST00000548132 TBC1D12O60347 775 aa15.27■□□□□ 0.04
GCN1-204ENST00000548132 MAP4K4O95819 1239 aaPredicted RBP15.27■□□□□ 0.04
GCN1-204ENST00000548132 NAA16Q6N069 864 aaPredicted RBP15.27■□□□□ 0.04
GCN1-204ENST00000548132 ZSCAN29Q8IWY8 852 aaPredicted RBP15.27■□□□□ 0.04
GCN1-204ENST00000548132 ZNF333Q96JL9 665 aa15.27■□□□□ 0.04
GCN1-204ENST00000548132 LRP2BPQ9P2M1 347 aa15.27■□□□□ 0.04
GCN1-204ENST00000548132 CPA4Q9UI42 421 aa15.27■□□□□ 0.04
GCN1-204ENST00000548132 COG6Q9Y2V7 657 aa15.27■□□□□ 0.04
GCN1-204ENST00000548132 ALPK3Q96L96 1907 aa15.27■□□□□ 0.03
GCN1-204ENST00000548132 GREB1LQ9C091 1923 aaPredicted RBP15.27■□□□□ 0.03
GCN1-204ENST00000548132 FRMPD3Q5JV73 1810 aa15.27■□□□□ 0.03
GCN1-204ENST00000548132 RLFQ13129 1914 aa15.26■□□□□ 0.03
GCN1-204ENST00000548132 CXCL11O14625 94 aa15.26■□□□□ 0.03
GCN1-204ENST00000548132 CTNND1O60716 968 aaKnown RBP15.26■□□□□ 0.03
GCN1-204ENST00000548132 CYP2C8P10632 490 aa15.26■□□□□ 0.03
GCN1-204ENST00000548132 PPP4CP60510 307 aa15.26■□□□□ 0.03
GCN1-204ENST00000548132 DYNLL1P63167 89 aaKnown RBP15.26■□□□□ 0.03
GCN1-204ENST00000548132 TRIM47Q96LD4 638 aa15.26■□□□□ 0.03
GCN1-204ENST00000548132 ZHX2Q9Y6X8 837 aa15.26■□□□□ 0.03
GCN1-204ENST00000548132 LDHCP07864 332 aa15.25■□□□□ 0.03
GCN1-204ENST00000548132 CCDC158Q5M9N0 1113 aa15.25■□□□□ 0.03
GCN1-204ENST00000548132 TREML2Q5T2D2 321 aa15.25■□□□□ 0.03
GCN1-204ENST00000548132 AACSQ86V21 672 aa15.25■□□□□ 0.03
GCN1-204ENST00000548132 METTL16Q86W50 562 aaKnown RBP15.25■□□□□ 0.03
GCN1-204ENST00000548132 MAPKAPK5Q8IW41 473 aa15.25■□□□□ 0.03
GCN1-204ENST00000548132 RHPN1Q8TCX5 695 aa15.25■□□□□ 0.03
GCN1-204ENST00000548132 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
GCN1-204ENST00000548132 PARK7Q99497 189 aaKnown RBP15.24■□□□□ 0.03
GCN1-204ENST00000548132 PICK1Q9NRD5 415 aa15.24■□□□□ 0.03
GCN1-204ENST00000548132 RCAN3Q9UKA8 241 aa15.24■□□□□ 0.03
GCN1-204ENST00000548132 TRIM75PA6NK02 468 aa15.23■□□□□ 0.03
GCN1-204ENST00000548132 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.23■□□□□ 0.032e-8■■■■□ 23.6
GCN1-204ENST00000548132 DDX19BQ9UMR2 479 aa15.23■□□□□ 0.03
GCN1-204ENST00000548132 ECM2O94769 699 aaPredicted RBP15.22■□□□□ 0.03
GCN1-204ENST00000548132 OSBPP22059 807 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 CAP2P40123 477 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 EVX2Q03828 476 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 GADL1Q6ZQY3 521 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 MIGA1Q8NAN2 632 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 SH3TC2Q8TF17 1288 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 TGFBRAP1Q8WUH2 860 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 RIOK1Q9BRS2 568 aaKnown RBP15.22■□□□□ 0.03
GCN1-204ENST00000548132 HERC5Q9UII4 1024 aaKnown RBP15.22■□□□□ 0.03
GCN1-204ENST00000548132 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 SLC45A1Q9Y2W3 748 aa15.22■□□□□ 0.03
GCN1-204ENST00000548132 IGSF3O75054 1194 aa15.21■□□□□ 0.03
GCN1-204ENST00000548132 IDH1O75874 414 aaKnown RBP15.21■□□□□ 0.03
GCN1-204ENST00000548132 CYP7A1P22680 504 aa15.21■□□□□ 0.03
GCN1-204ENST00000548132 SLC4A8Q2Y0W8 1093 aa15.21■□□□□ 0.03
GCN1-204ENST00000548132 MAGEB6Q8N7X4 407 aa15.21■□□□□ 0.03
GCN1-204ENST00000548132 SHISA4Q96DD7 197 aa15.21■□□□□ 0.03
GCN1-204ENST00000548132 EDC3Q96F86 508 aaKnown RBP15.21■□□□□ 0.03
GCN1-204ENST00000548132 PALD1Q9ULE6 856 aa15.21■□□□□ 0.03
GCN1-204ENST00000548132 TCRBV5S4A2TA0A5A2 114 aa15.2■□□□□ 0.02
GCN1-204ENST00000548132 GDF11O95390 407 aa15.2■□□□□ 0.02
GCN1-204ENST00000548132 PLCG2P16885 1265 aa15.2■□□□□ 0.02
GCN1-204ENST00000548132 HMGCS2P54868 508 aa15.2■□□□□ 0.02
GCN1-204ENST00000548132 PRKCZQ05513 592 aa15.2■□□□□ 0.02
GCN1-204ENST00000548132 SLC9C1Q4G0N8 1177 aa15.2■□□□□ 0.02
GCN1-204ENST00000548132 RPAP2Q8IXW5 612 aaPredicted RBP15.2■□□□□ 0.02
GCN1-204ENST00000548132 PROCA1Q8NCQ7 364 aaPredicted RBP15.2■□□□□ 0.02
GCN1-204ENST00000548132 SRRDQ9UH36 339 aa15.2■□□□□ 0.02
GCN1-204ENST00000548132 SAP30BPQ9UHR5 308 aaKnown RBP15.2■□□□□ 0.02
GCN1-204ENST00000548132 ZNF236Q9UL36 1845 aa15.2■□□□□ 0.02
GCN1-204ENST00000548132 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 APBB1O00213 710 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 CHGBP05060 677 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 PDE6AP16499 860 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 EN2P19622 333 aaPredicted RBP15.19■□□□□ 0.02
GCN1-204ENST00000548132 PSMC4P43686 418 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 SH3D19Q5HYK7 790 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 FASTKD5Q7L8L6 764 aaKnown RBP15.19■□□□□ 0.02
GCN1-204ENST00000548132 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.19■□□□□ 0.02
GCN1-204ENST00000548132 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 DHX36Q9H2U1 1008 aaKnown RBP15.19■□□□□ 0.02
GCN1-204ENST00000548132 PI4KBQ9UBF8 816 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 ZBTB21Q9ULJ3 1066 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 GABRQQ9UN88 632 aa15.19■□□□□ 0.02
GCN1-204ENST00000548132 RANBP2P49792 3224 aaKnown RBP15.19■□□□□ 0.02
GCN1-204ENST00000548132 COL11A1P12107 1806 aaPredicted RBP15.18■□□□□ 0.02
GCN1-204ENST00000548132 BAG3O95817 575 aa15.18■□□□□ 0.02
GCN1-204ENST00000548132 GNRH1P01148 92 aa15.18■□□□□ 0.02
GCN1-204ENST00000548132 MS4A1P11836 297 aa15.18■□□□□ 0.02
GCN1-204ENST00000548132 SPP2Q13103 211 aa15.18■□□□□ 0.02
GCN1-204ENST00000548132 MTFR1Q15390 333 aa15.18■□□□□ 0.02
GCN1-204ENST00000548132 SLFNL1Q499Z3 407 aa15.18■□□□□ 0.02
GCN1-204ENST00000548132 PRPF38BQ5VTL8 546 aaKnown RBP15.18■□□□□ 0.02
GCN1-204ENST00000548132 NOL10Q9BSC4 688 aaKnown RBP15.18■□□□□ 0.02
GCN1-204ENST00000548132 PRMT2P55345 433 aa15.17■□□□□ 0.02
GCN1-204ENST00000548132 MTMR2Q13614 643 aa15.17■□□□□ 0.02
GCN1-204ENST00000548132 PDE3AQ14432 1141 aa15.17■□□□□ 0.02
GCN1-204ENST00000548132 POTEEQ6S8J3 1075 aa15.17■□□□□ 0.02
GCN1-204ENST00000548132 WDR18Q9BV38 432 aa15.17■□□□□ 0.02
GCN1-204ENST00000548132 EHD4Q9H223 541 aa15.17■□□□□ 0.02
GCN1-204ENST00000548132 USP17L5A8MUK1 530 aa15.16■□□□□ 0.02
GCN1-204ENST00000548132 PEX10O60683 326 aa15.16■□□□□ 0.02
GCN1-204ENST00000548132 SLC34A2O95436 690 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms