RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 MYH2Q9UKX2 1941 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 CDC42EP5Q6NZY7 148 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 AGXT2Q9BYV1 514 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 YDJCA8MPS7 323 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
LINC00485-201ENST00000547179 METAP2P50579 478 aaKnown RBP eCLIP13.04□□□□□ -0.32
LINC00485-201ENST00000547179 RHBDL3P58872 404 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 IFIT1BQ5T764 474 aaKnown RBP13.04□□□□□ -0.32
LINC00485-201ENST00000547179 GTF3C6Q969F1 213 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 KCNQ5Q9NR82 932 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 ZSWIM5Q9P217 1185 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 CHD4Q14839 1912 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
LINC00485-201ENST00000547179 LMNB1P20700 586 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 CXCL9Q07325 125 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 GJA3Q9Y6H8 435 aa13.04□□□□□ -0.32
LINC00485-201ENST00000547179 GOLGA8AA7E2F4 631 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 ENTPD3O75355 529 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 AKAP17AQ02040 695 aaKnown RBP13.03□□□□□ -0.32
LINC00485-201ENST00000547179 NECAB1Q8N987 351 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 ZSCAN10Q96SZ4 725 aaPredicted RBP13.03□□□□□ -0.32
LINC00485-201ENST00000547179 SNED1Q8TER0 1413 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 CYP2D7A0A087X1C5 515 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 H3BQV1 296 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 RCAN1P53805 252 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 H7C1D1 291 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 NFKBIEO00221 500 aa13.03□□□□□ -0.32
LINC00485-201ENST00000547179 APOBEC3HQ6NTF7 200 aaKnown RBP13.03□□□□□ -0.32
LINC00485-201ENST00000547179 OSBPL5Q9H0X9 879 aaPredicted RBP13.03□□□□□ -0.32
LINC00485-201ENST00000547179 PRDM1O75626 825 aa13.02□□□□□ -0.32
LINC00485-201ENST00000547179 GJB2P29033 226 aa13.02□□□□□ -0.32
LINC00485-201ENST00000547179 TNFAIP1Q13829 316 aa13.02□□□□□ -0.32
LINC00485-201ENST00000547179 LARP1BQ659C4 914 aaKnown RBP13.02□□□□□ -0.32
LINC00485-201ENST00000547179 FGRP09769 529 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 PDIA3P30101 505 aaKnown RBP13.02□□□□□ -0.33
LINC00485-201ENST00000547179 CYB5R4Q7L1T6 521 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 SGMS1Q86VZ5 419 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 FOXP4Q8IVH2 680 aaPredicted RBP13.02□□□□□ -0.33
LINC00485-201ENST00000547179 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 WASF1Q92558 559 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 IDI2Q9BXS1 227 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 KAT14Q9H8E8 782 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 CYP2D6P10635 497 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 CCT2P78371 535 aaKnown RBP13.02□□□□□ -0.33
LINC00485-201ENST00000547179 TFAP4Q01664 338 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 SLC4A8Q2Y0W8 1093 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 SYT17Q9BSW7 474 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 NBPF3Q9H094 633 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 PI4KBQ9UBF8 816 aa13.02□□□□□ -0.33
LINC00485-201ENST00000547179 KIAA1551Q9HCM1 1747 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 KIF5BP33176 963 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 EVCP57679 992 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 ANTXR2P58335 489 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 ILDR2Q71H61 639 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 CTCFLQ8NI51 663 aaPredicted RBP13.01□□□□□ -0.33
LINC00485-201ENST00000547179 NUP133Q8WUM0 1156 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 DPF2Q92785 391 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
LINC00485-201ENST00000547179 TNKSO95271 1327 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 CDK8P49336 464 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 RASSF7Q02833 373 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 C16orf86Q6ZW13 317 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 VEZTQ9HBM0 779 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 MKRN1Q9UHC7 482 aaKnown RBP13.01□□□□□ -0.33
LINC00485-201ENST00000547179 RTN1Q16799 776 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 MICU3Q86XE3 530 aa13.01□□□□□ -0.33
LINC00485-201ENST00000547179 RBM28Q9NW13 759 aaKnown RBP13.01□□□□□ -0.33
LINC00485-201ENST00000547179 ROBO3Q96MS0 1386 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 LMOD1P29536 600 aaPredicted RBP13□□□□□ -0.33
LINC00485-201ENST00000547179 TRIM29Q14134 588 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 ZKSCAN3Q9BRR0 538 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 TDRD3Q9H7E2 651 aaKnown RBP13□□□□□ -0.33
LINC00485-201ENST00000547179 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 WDHD1O75717 1129 aaPredicted RBP13□□□□□ -0.33
LINC00485-201ENST00000547179 SPDYE6P0CI01 402 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 GNAQP50148 359 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 GPR162Q16538 588 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 FKBP1CQ5VVH2 108 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 DGKHQ86XP1 1220 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 IGDCC4Q8TDY8 1250 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 VPS37CA5D8V6 355 aaPredicted RBP13□□□□□ -0.33
LINC00485-201ENST00000547179 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 TCP10Q12799 353 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 RAB3GAP1Q15042 981 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 APOA5Q6Q788 366 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 HOOK2Q96ED9 719 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 EHD4Q9H223 541 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 LY9Q9HBG7 655 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 CABP5Q9NP86 173 aa13□□□□□ -0.33
LINC00485-201ENST00000547179 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
LINC00485-201ENST00000547179 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
LINC00485-201ENST00000547179 STX6O43752 255 aa12.99□□□□□ -0.33
LINC00485-201ENST00000547179 GRIN3BO60391 1043 aa12.99□□□□□ -0.33
LINC00485-201ENST00000547179 DDAH1O94760 285 aa12.99□□□□□ -0.33
LINC00485-201ENST00000547179 LARGE1O95461 756 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms