RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 FAM84AQ96KN4 292 aa8.26□□□□□ -1.09
CCDC38-204ENST00000546816 PNMA6FA0A0J9YX94 578 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 DCDC2CA8MYV0 355 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 FANCGO15287 622 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 TREHO43280 583 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 PAGE1O75459 146 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 ZP2Q05996 745 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 IKZF1Q13422 519 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 ZBTB37Q5TC79 503 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 BHLHE22Q8NFJ8 381 aaPredicted RBP8.25□□□□□ -1.09
CCDC38-204ENST00000546816 DCTN4Q9UJW0 460 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 CTNND2Q9UQB3 1225 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 PITPNM2Q9BZ72 1349 aa8.25□□□□□ -1.09
CCDC38-204ENST00000546816 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.24□□□□□ -1.09
CCDC38-204ENST00000546816 C12orf40Q86WS4 652 aa8.24□□□□□ -1.09
CCDC38-204ENST00000546816 CILP2Q8IUL8 1156 aa8.24□□□□□ -1.09
CCDC38-204ENST00000546816 SLC38A3Q99624 504 aa8.24□□□□□ -1.09
CCDC38-204ENST00000546816 FAM53CQ9NYF3 392 aa8.24□□□□□ -1.09
CCDC38-204ENST00000546816 LRRC10BA6NIK2 292 aa8.23□□□□□ -1.09
CCDC38-204ENST00000546816 CLCN7P51798 805 aa8.23□□□□□ -1.09
CCDC38-204ENST00000546816 PLCB3Q01970 1234 aa8.23□□□□□ -1.09
CCDC38-204ENST00000546816 PDE4CQ08493 712 aa8.23□□□□□ -1.09
CCDC38-204ENST00000546816 RASIP1Q5U651 963 aa8.23□□□□□ -1.09
CCDC38-204ENST00000546816 TPTE2Q6XPS3 522 aa8.23□□□□□ -1.09
CCDC38-204ENST00000546816 GSTT1P30711 240 aa8.22□□□□□ -1.09
CCDC38-204ENST00000546816 KCNMB1Q16558 191 aa8.22□□□□□ -1.09
CCDC38-204ENST00000546816 SCARA3Q6AZY7 606 aa8.22□□□□□ -1.09
CCDC38-204ENST00000546816 ANKRD24Q8TF21 1146 aa8.22□□□□□ -1.09
CCDC38-204ENST00000546816 CEP44Q9C0F1 390 aa8.22□□□□□ -1.09
CCDC38-204ENST00000546816 LMCD1Q9NZU5 365 aa8.22□□□□□ -1.09
CCDC38-204ENST00000546816 PPM1HQ9ULR3 514 aa8.22□□□□□ -1.09
CCDC38-204ENST00000546816 SAMM50Q9Y512 469 aa8.22□□□□□ -1.09
CCDC38-204ENST00000546816 FYB2Q5VWT5 728 aa8.21□□□□□ -1.1
CCDC38-204ENST00000546816 LLGL2Q6P1M3 1020 aa8.21□□□□□ -1.1
CCDC38-204ENST00000546816 ARMCX6Q7L4S7 300 aa8.21□□□□□ -1.1
CCDC38-204ENST00000546816 SRCIN1Q9C0H9 1055 aa8.21□□□□□ -1.1
CCDC38-204ENST00000546816 MAPK8IP1Q9UQF2 711 aa8.21□□□□□ -1.1
CCDC38-204ENST00000546816 GNEQ9Y223 722 aaKnown RBP8.21□□□□□ -1.1
CCDC38-204ENST00000546816 GNAT3A8MTJ3 354 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 MLANAQ16655 118 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 KRTAP19-4Q3LI73 84 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 KCT2Q8NC54 265 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 OSBPL7Q9BZF2 842 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 FOXQ1Q9C009 403 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 PRDM5Q9NQX1 630 aaPredicted RBP8.2□□□□□ -1.1
CCDC38-204ENST00000546816 PICK1Q9NRD5 415 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 SEMA3GQ9NS98 782 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 PCDHA4Q9UN74 947 aa8.2□□□□□ -1.1
CCDC38-204ENST00000546816 FBXO24O75426 580 aa8.19□□□□□ -1.1
CCDC38-204ENST00000546816 LRIG2O94898 1065 aa8.19□□□□□ -1.1
CCDC38-204ENST00000546816 SLITRK5O94991 958 aa8.19□□□□□ -1.1
CCDC38-204ENST00000546816 AFMP43652 599 aa8.19□□□□□ -1.1
CCDC38-204ENST00000546816 LRRC14Q15048 493 aa8.19□□□□□ -1.1
CCDC38-204ENST00000546816 FBF1Q8TES7 1133 aa8.19□□□□□ -1.1
CCDC38-204ENST00000546816 LIN37Q96GY3 246 aaPredicted RBP8.19□□□□□ -1.1
CCDC38-204ENST00000546816 BIN2Q9UBW5 565 aaPredicted RBP8.19□□□□□ -1.1
CCDC38-204ENST00000546816 C22orf34Q6ZV56 151 aa8.18□□□□□ -1.1
CCDC38-204ENST00000546816 ZNF507Q8TCN5 953 aa8.18□□□□□ -1.1
CCDC38-204ENST00000546816 C19orf73Q9NVV2 129 aa8.18□□□□□ -1.1
CCDC38-204ENST00000546816 CYP8B1Q9UNU6 501 aa8.18□□□□□ -1.1
CCDC38-204ENST00000546816 CNTNAP4Q9C0A0 1308 aa8.18□□□□□ -1.1
CCDC38-204ENST00000546816 PRR33A8MZF0 331 aa8.17□□□□□ -1.1
CCDC38-204ENST00000546816 ZNF865P0CJ78 1059 aaPredicted RBP8.17□□□□□ -1.1
CCDC38-204ENST00000546816 MAPK1P28482 360 aa8.17□□□□□ -1.1
CCDC38-204ENST00000546816 SLBPQ14493 270 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCDC38-204ENST00000546816 INPP5AQ14642 412 aa8.17□□□□□ -1.1
CCDC38-204ENST00000546816 CYFIP1Q7L576 1253 aa8.17□□□□□ -1.1
CCDC38-204ENST00000546816 HSPA12BQ96MM6 686 aa8.17□□□□□ -1.1
CCDC38-204ENST00000546816 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
CCDC38-204ENST00000546816 CARS2Q9HA77 564 aaKnown RBP8.17□□□□□ -1.1
CCDC38-204ENST00000546816 FBRSQ9HAH7 460 aa8.17□□□□□ -1.1
CCDC38-204ENST00000546816 TSPAN15O95858 294 aa8.16□□□□□ -1.1
CCDC38-204ENST00000546816 GLI1P08151 1106 aa8.16□□□□□ -1.1
CCDC38-204ENST00000546816 PTPN11Q06124 597 aaPredicted RBP8.16□□□□□ -1.1
CCDC38-204ENST00000546816 LRFN4Q6PJG9 635 aa8.16□□□□□ -1.1
CCDC38-204ENST00000546816 ELMO3Q96BJ8 720 aa8.16□□□□□ -1.1
CCDC38-204ENST00000546816 ATP13A1Q9HD20 1204 aa8.16□□□□□ -1.1
CCDC38-204ENST00000546816 GIPC1O14908 333 aa8.15□□□□□ -1.1
CCDC38-204ENST00000546816 BRD1O95696 1058 aa8.15□□□□□ -1.1
CCDC38-204ENST00000546816 CELA3AP09093 270 aa8.15□□□□□ -1.1
CCDC38-204ENST00000546816 CAP2P40123 477 aa8.15□□□□□ -1.1
CCDC38-204ENST00000546816 FMR1Q06787 632 aaKnown RBP eCLIP8.15□□□□□ -1.1
CCDC38-204ENST00000546816 PCNX4Q63HM2 1172 aa8.15□□□□□ -1.1
CCDC38-204ENST00000546816 C1QL4Q86Z23 238 aa8.15□□□□□ -1.1
CCDC38-204ENST00000546816 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
CCDC38-204ENST00000546816 CFPP27918 469 aa8.14□□□□□ -1.11
CCDC38-204ENST00000546816 RAP1GAPP47736 663 aa8.14□□□□□ -1.11
CCDC38-204ENST00000546816 PRR23BQ6ZRT6 265 aa8.14□□□□□ -1.11
CCDC38-204ENST00000546816 NPAS4Q8IUM7 802 aa8.14□□□□□ -1.11
CCDC38-204ENST00000546816 KIRREL1Q96J84 757 aa8.14□□□□□ -1.11
CCDC38-204ENST00000546816 KRTAP4-2Q9BYR5 136 aa8.14□□□□□ -1.11
CCDC38-204ENST00000546816 ST14Q9Y5Y6 855 aa8.14□□□□□ -1.11
CCDC38-204ENST00000546816 GDNFP39905 211 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 MAPK8P45983 427 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 NKG7Q16617 165 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 SFRP5Q5T4F7 317 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 MFSD4AQ8N468 514 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 GAL3ST3Q96A11 431 aa8.13□□□□□ -1.11
CCDC38-204ENST00000546816 PLPPR2Q96GM1 343 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms