RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 NOM1Q5C9Z4 860 aaKnown RBP13.95□□□□□ -0.18
CCDC38-202ENST00000546386 STAG1Q8WVM7 1258 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 BRIP1Q9BX63 1249 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 STX8Q9UNK0 236 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 SALL1Q9NSC2 1324 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 ADAMTS3O15072 1205 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 BBOX1O75936 387 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 GNAT2P19087 354 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 IARSP41252 1262 aaKnown RBP13.95□□□□□ -0.18
CCDC38-202ENST00000546386 UBE2HP62256 183 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 NR5A1Q13285 461 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 SLC15A2Q16348 729 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
CCDC38-202ENST00000546386 CACNA1SQ13698 1873 aa13.95□□□□□ -0.18
CCDC38-202ENST00000546386 FAM205CA6NFA0 338 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 TFAP4Q01664 338 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 IFIT1BQ5T764 474 aaKnown RBP13.94□□□□□ -0.18
CCDC38-202ENST00000546386 NBPF11Q86T75 865 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 KRT23Q9C075 422 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 MRE11P49959 708 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 ALX1Q15699 326 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 AOC3Q16853 763 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 ISM2Q6H9L7 571 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 OXER1Q8TDS5 423 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 ESR2Q92731 530 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
CCDC38-202ENST00000546386 MKNK2Q9HBH9 465 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 VPS54Q9P1Q0 977 aa13.94□□□□□ -0.18
CCDC38-202ENST00000546386 TTF2Q9UNY4 1162 aaKnown RBP13.94□□□□□ -0.18
CCDC38-202ENST00000546386 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
CCDC38-202ENST00000546386 A0A1B0GVL5 298 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 BTBD18B2RXH4 712 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 NTRK3Q16288 839 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 KRT40Q6A162 431 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 SYNE3Q6ZMZ3 975 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 TEX11Q8IYF3 940 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 WDR66Q8TBY9 1149 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 RTN1Q16799 776 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 ZFPM1Q8IX07 1006 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 FANCBQ8NB91 859 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 FBXO18Q8NFZ0 1043 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 GOLPH3LQ9H4A5 285 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 ATP6V0A2Q9Y487 856 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 ZMYM6O95789 1325 aa13.93□□□□□ -0.18
CCDC38-202ENST00000546386 CHD4Q14839 1912 aa13.92□□□□□ -0.18
CCDC38-202ENST00000546386 ATP2B4P23634 1241 aa13.92□□□□□ -0.18
CCDC38-202ENST00000546386 HMGN5P82970 282 aaKnown RBP13.92□□□□□ -0.18
CCDC38-202ENST00000546386 SART3Q15020 963 aaKnown RBP13.92□□□□□ -0.18
CCDC38-202ENST00000546386 L1TD1Q5T7N2 865 aaKnown RBP13.92□□□□□ -0.18
CCDC38-202ENST00000546386 SHISA4Q96DD7 197 aa13.92□□□□□ -0.18
CCDC38-202ENST00000546386 MBD3O95983 291 aa13.92□□□□□ -0.18
CCDC38-202ENST00000546386 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
CCDC38-202ENST00000546386 TMEM87BQ96K49 555 aa13.92□□□□□ -0.18
CCDC38-202ENST00000546386 CAMKK2Q96RR4 588 aa13.92□□□□□ -0.18
CCDC38-202ENST00000546386 LLPHQ9BRT6 129 aaKnown RBP13.92□□□□□ -0.18
CCDC38-202ENST00000546386 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
CCDC38-202ENST00000546386 CNNM2Q9H8M5 875 aa13.92□□□□□ -0.18
CCDC38-202ENST00000546386 H0YIN7 160 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 DHX16O60231 1041 aaKnown RBP13.91□□□□□ -0.18
CCDC38-202ENST00000546386 EVCP57679 992 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 NFIAQ12857 509 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 LRSAM1Q6UWE0 723 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 CLIC6Q96NY7 704 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 HOXA10P31260 410 aaPredicted RBP13.91□□□□□ -0.18
CCDC38-202ENST00000546386 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 DDX4Q9NQI0 724 aaKnown RBP13.91□□□□□ -0.18
CCDC38-202ENST00000546386 ISY1Q9ULR0 285 aaKnown RBP13.91□□□□□ -0.18
CCDC38-202ENST00000546386 COL24A1Q17RW2 1714 aa13.91□□□□□ -0.18
CCDC38-202ENST00000546386 NPR1P16066 1061 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 SSRP1Q08945 709 aaKnown RBP13.9□□□□□ -0.18
CCDC38-202ENST00000546386 SEC23AQ15436 765 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 SF3A1Q15459 793 aaKnown RBP13.9□□□□□ -0.18
CCDC38-202ENST00000546386 IQCA1Q86XH1 822 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 SP8Q8IXZ3 490 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 CRAMP1Q96RY5 1269 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 ARAP2Q8WZ64 1704 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 SEMA3EO15041 775 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 EARS2Q5JPH6 523 aaKnown RBP13.9□□□□□ -0.18
CCDC38-202ENST00000546386 CCAR1Q8IX12 1150 aaKnown RBP13.9□□□□□ -0.18
CCDC38-202ENST00000546386 GPKOWQ92917 476 aaPredicted RBP eCLIP13.9□□□□□ -0.18
CCDC38-202ENST00000546386 MASTLQ96GX5 879 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 NOL10Q9BSC4 688 aaKnown RBP13.9□□□□□ -0.18
CCDC38-202ENST00000546386 RNF41Q9H4P4 317 aaPredicted RBP13.9□□□□□ -0.18
CCDC38-202ENST00000546386 STK32BQ9NY57 414 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 DAGLAQ9Y4D2 1042 aa13.9□□□□□ -0.18
CCDC38-202ENST00000546386 PDE6BP35913 854 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 ZNF445P59923 1031 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 KIF23Q02241 960 aaPredicted RBP13.89□□□□□ -0.19
CCDC38-202ENST00000546386 SPTY2D1Q68D10 685 aaPredicted RBP13.89□□□□□ -0.19
CCDC38-202ENST00000546386 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
CCDC38-202ENST00000546386 A0A1B0GUL6 1792 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 MROH7-TTC4A0A0A0MT08 1334 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 RAD17O75943 681 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 TSPY3P0CV98 308 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 TSPY8P0CW00 308 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 IL1R1P14778 569 aa13.89□□□□□ -0.19
CCDC38-202ENST00000546386 PTMSP20962 102 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms