RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-233ENST00000545720 SSH3Q8TE77 659 aa29.21■■■□□ 2.27
RAP1B-233ENST00000545720 DBNDD2Q9BQY9 259 aa29.21■■■□□ 2.27
RAP1B-233ENST00000545720 NOL10Q9BSC4 688 aaKnown RBP29.21■■■□□ 2.27
RAP1B-233ENST00000545720 SLC45A1Q9Y2W3 748 aa29.21■■■□□ 2.27
RAP1B-233ENST00000545720 ATP8B2P98198 1209 aa29.2■■■□□ 2.26
RAP1B-233ENST00000545720 SH3RF3Q8TEJ3 882 aaPredicted RBP29.2■■■□□ 2.26
RAP1B-233ENST00000545720 SMCR8Q8TEV9 937 aaPredicted RBP29.2■■■□□ 2.26
RAP1B-233ENST00000545720 GPR108Q9NPR9 543 aa29.2■■■□□ 2.26
RAP1B-233ENST00000545720 SURF6O75683 361 aaKnown RBP29.19■■■□□ 2.26
RAP1B-233ENST00000545720 CCDC158Q5M9N0 1113 aa29.19■■■□□ 2.26
RAP1B-233ENST00000545720 NAA16Q6N069 864 aaPredicted RBP29.19■■■□□ 2.26
RAP1B-233ENST00000545720 ITPRIPQ8IWB1 547 aa29.19■■■□□ 2.26
RAP1B-233ENST00000545720 AGTPBP1Q9UPW5 1226 aa29.19■■■□□ 2.26
RAP1B-233ENST00000545720 MYH1P12882 1939 aa29.18■■■□□ 2.26
RAP1B-233ENST00000545720 AATFQ9NY61 560 aaKnown RBP eCLIP29.18■■■□□ 2.26
RAP1B-233ENST00000545720 GABRQQ9UN88 632 aa29.18■■■□□ 2.26
RAP1B-233ENST00000545720 TREML2Q5T2D2 321 aa29.17■■■□□ 2.26
RAP1B-233ENST00000545720 BIN2Q9UBW5 565 aaPredicted RBP29.17■■■□□ 2.26
RAP1B-233ENST00000545720 RLBP1P12271 317 aa29.16■■■□□ 2.26
RAP1B-233ENST00000545720 SHISA4Q96DD7 197 aa29.16■■■□□ 2.26
RAP1B-233ENST00000545720 BAG3O95817 575 aa29.15■■■□□ 2.26
RAP1B-233ENST00000545720 SPP2Q13103 211 aa29.15■■■□□ 2.26
RAP1B-233ENST00000545720 RRP1BQ14684 758 aaKnown RBP29.15■■■□□ 2.26
RAP1B-233ENST00000545720 MIER1Q8N108 512 aa29.15■■■□□ 2.26
RAP1B-233ENST00000545720 CYP2E1P05181 493 aaPredicted RBP29.14■■■□□ 2.26
RAP1B-233ENST00000545720 CCL5P13501 91 aa29.14■■■□□ 2.26
RAP1B-233ENST00000545720 CAP2P40123 477 aa29.14■■■□□ 2.26
RAP1B-233ENST00000545720 HABP4Q5JVS0 413 aaKnown RBP29.14■■■□□ 2.26
RAP1B-233ENST00000545720 ADGRA1Q86SQ6 560 aa29.14■■■□□ 2.26
RAP1B-233ENST00000545720 ZNF280CQ8ND82 737 aa29.14■■■□□ 2.26
RAP1B-233ENST00000545720 PCDH10Q9P2E7 1040 aa29.14■■■□□ 2.26
RAP1B-233ENST00000545720 HERC5Q9UII4 1024 aaKnown RBP29.14■■■□□ 2.26
RAP1B-233ENST00000545720 PLCG2P16885 1265 aa29.13■■■□□ 2.25
RAP1B-233ENST00000545720 UBXN2AP68543 259 aa29.13■■■□□ 2.25
RAP1B-233ENST00000545720 ANKRD13CQ8N6S4 541 aa29.13■■■□□ 2.25
RAP1B-233ENST00000545720 PROCA1Q8NCQ7 364 aaPredicted RBP29.13■■■□□ 2.25
RAP1B-233ENST00000545720 SLAIN1Q8ND83 568 aa29.13■■■□□ 2.25
RAP1B-233ENST00000545720 PI4KBQ9UBF8 816 aa29.13■■■□□ 2.25
RAP1B-233ENST00000545720 PNMA3Q9UL41 463 aa29.13■■■□□ 2.25
RAP1B-233ENST00000545720 TNPO2O14787 897 aaKnown RBP29.12■■■□□ 2.25
RAP1B-233ENST00000545720 ZBTB7BO15156 539 aaPredicted RBP29.12■■■□□ 2.25
RAP1B-233ENST00000545720 ZAP70P43403 619 aa29.12■■■□□ 2.25
RAP1B-233ENST00000545720 FLT3LGP49771 235 aa29.12■■■□□ 2.25
RAP1B-233ENST00000545720 HMGCS2P54868 508 aa29.12■■■□□ 2.25
RAP1B-233ENST00000545720 MAPKAPK5Q8IW41 473 aa29.12■■■□□ 2.25
RAP1B-233ENST00000545720 TGFBRAP1Q8WUH2 860 aa29.12■■■□□ 2.25
RAP1B-233ENST00000545720 RNF208Q9H0X6 261 aa29.12■■■□□ 2.25
RAP1B-233ENST00000545720 TLR7Q9NYK1 1049 aaKnown RBP29.12■■■□□ 2.25
RAP1B-233ENST00000545720 DBNLQ9UJU6 430 aaKnown RBP29.12■■■□□ 2.25
RAP1B-233ENST00000545720 NOP58Q9Y2X3 529 aaKnown RBP29.12■■■□□ 2.25
RAP1B-233ENST00000545720 USP17L5A8MUK1 530 aa29.11■■■□□ 2.25
RAP1B-233ENST00000545720 NKX2-3Q8TAU0 364 aa29.11■■■□□ 2.25
RAP1B-233ENST00000545720 ZNF512BQ96KM6 892 aaPredicted RBP29.11■■■□□ 2.25
RAP1B-233ENST00000545720 TBC1D2Q9BYX2 928 aa29.11■■■□□ 2.25
RAP1B-233ENST00000545720 DHX36Q9H2U1 1008 aaKnown RBP29.11■■■□□ 2.25
RAP1B-233ENST00000545720 PIH1D3Q9NQM4 214 aaKnown RBP29.11■■■□□ 2.25
RAP1B-233ENST00000545720 FLT1P17948 1338 aa29.11■■■□□ 2.25
RAP1B-233ENST00000545720 ADCY3O60266 1144 aa29.1■■■□□ 2.25
RAP1B-233ENST00000545720 GJB1P08034 283 aa29.1■■■□□ 2.25
RAP1B-233ENST00000545720 PPP4CP60510 307 aa29.1■■■□□ 2.25
RAP1B-233ENST00000545720 CCDC8Q9H0W5 538 aaPredicted RBP29.1■■■□□ 2.25
RAP1B-233ENST00000545720 ELNP15502 786 aa29.09■■■□□ 2.25
RAP1B-233ENST00000545720 GJA8P48165 433 aa29.09■■■□□ 2.25
RAP1B-233ENST00000545720 FAM110CQ1W6H9 321 aa29.08■■■□□ 2.25
RAP1B-233ENST00000545720 EAF2Q96CJ1 260 aaPredicted RBP29.08■■■□□ 2.25
RAP1B-233ENST00000545720 UNC93B1Q9H1C4 597 aa29.08■■■□□ 2.25
RAP1B-233ENST00000545720 AS3MTQ9HBK9 375 aa29.08■■■□□ 2.25
RAP1B-233ENST00000545720 TAOK2Q9UL54 1235 aa29.08■■■□□ 2.25
RAP1B-233ENST00000545720 CRACR2BQ8N4Y2 399 aaPredicted RBP29.07■■■□□ 2.24
RAP1B-233ENST00000545720 DNAJC18Q9H819 358 aa29.07■■■□□ 2.24
RAP1B-233ENST00000545720 PALD1Q9ULE6 856 aa29.07■■■□□ 2.24
RAP1B-233ENST00000545720 PABPC4Q13310 644 aaKnown RBP eCLIP29.06■■■□□ 2.24
RAP1B-233ENST00000545720 MTMR2Q13614 643 aa29.06■■■□□ 2.24
RAP1B-233ENST00000545720 CEP85Q6P2H3 762 aa29.06■■■□□ 2.24
RAP1B-233ENST00000545720 COA7Q96BR5 231 aa29.06■■■□□ 2.24
RAP1B-233ENST00000545720 TRIM34Q9BYJ4 488 aa29.06■■■□□ 2.24
RAP1B-233ENST00000545720 SAP30BPQ9UHR5 308 aaKnown RBP29.06■■■□□ 2.24
RAP1B-233ENST00000545720 TRIOBPQ9H2D6 2365 aa29.06■■■□□ 2.24
RAP1B-233ENST00000545720 PLXNB2O15031 1838 aa29.06■■■□□ 2.24
RAP1B-233ENST00000545720 H0YGN5 161 aa29.05■■■□□ 2.24
RAP1B-233ENST00000545720 IDH1O75874 414 aaKnown RBP29.05■■■□□ 2.24
RAP1B-233ENST00000545720 INHAP05111 366 aa29.05■■■□□ 2.24
RAP1B-233ENST00000545720 ASNSP08243 561 aa29.05■■■□□ 2.24
RAP1B-233ENST00000545720 CYP7A1P22680 504 aa29.05■■■□□ 2.24
RAP1B-233ENST00000545720 DYNLL1P63167 89 aaKnown RBP29.05■■■□□ 2.24
RAP1B-233ENST00000545720 IRF5Q13568 498 aa29.05■■■□□ 2.24
RAP1B-233ENST00000545720 SH3D19Q5HYK7 790 aa29.05■■■□□ 2.24
RAP1B-233ENST00000545720 ASCC2Q9H1I8 757 aaPredicted RBP29.05■■■□□ 2.24
RAP1B-233ENST00000545720 GCLCP48506 637 aaPredicted RBP29.04■■■□□ 2.24
RAP1B-233ENST00000545720 JAG1P78504 1218 aa29.04■■■□□ 2.24
RAP1B-233ENST00000545720 SHROOM1Q2M3G4 852 aaPredicted RBP29.04■■■□□ 2.24
RAP1B-233ENST00000545720 PANK1Q8TE04 598 aa29.04■■■□□ 2.24
RAP1B-233ENST00000545720 PXYLP1Q8TE99 480 aa29.04■■■□□ 2.24
RAP1B-233ENST00000545720 U2AF1L4Q8WU68 220 aaKnown RBP29.04■■■□□ 2.24
RAP1B-233ENST00000545720 EXOC6BQ9Y2D4 811 aa29.04■■■□□ 2.24
RAP1B-233ENST00000545720 NDUFB9Q9Y6M9 179 aa29.04■■■□□ 2.24
RAP1B-233ENST00000545720 IGSF3O75054 1194 aa29.03■■■□□ 2.24
RAP1B-233ENST00000545720 GDF11O95390 407 aa29.03■■■□□ 2.24
RAP1B-233ENST00000545720 DIEXFQ68CQ4 756 aaKnown RBP29.03■■■□□ 2.24
RAP1B-233ENST00000545720 FOXP4Q8IVH2 680 aaPredicted RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms