RNA–Protein interactions for RNA: ENST00000545399.5

ATP1A3-208, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ATP1A3, Length 3,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-208ENST00000545399 CRNKL1Q9BZJ0 848 aaKnown RBP13.7□□□□□ -0.22
ATP1A3-208ENST00000545399 CNNM2Q9H8M5 875 aa13.7□□□□□ -0.22
ATP1A3-208ENST00000545399 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
ATP1A3-208ENST00000545399 FAM170AA1A519 330 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 ERVV-1B6SEH8 477 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 CTAGE5O15320 804 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 TFAP4Q01664 338 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 MECOMQ03112 1051 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 NFIXQ14938 502 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 LONRF3Q496Y0 759 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 CCDC112Q8NEF3 446 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 PCMTD1Q96MG8 357 aaPredicted RBP13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 CCDC196A0A1B0GTZ2 297 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 TSPY3P0CV98 308 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 TSPY8P0CW00 308 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 KAT14Q9H8E8 782 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 ELP1O95163 1332 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 SPATA31A1Q5TZJ5 1347 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 USP17L3A6NCW0 530 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 USP17L4A6NCW7 530 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 TRIM37O94972 964 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 PTPN14Q15678 1187 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 USP17L1Q7RTZ2 530 aa13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 ZNF622Q969S3 477 aaKnown RBP eCLIP13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 FAM84BQ96KN1 310 aaPredicted RBP13.69□□□□□ -0.22
ATP1A3-208ENST00000545399 NTSR2O95665 410 aa13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 SSBP05455 408 aaKnown RBP eCLIP13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 LDHBP07195 334 aaKnown RBP13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 BRAPQ7Z569 592 aa13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 ARHGEF1Q92888 912 aaKnown RBP13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 PCDHA5Q9Y5H7 936 aa13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 USP27XA6NNY8 438 aa13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 UBE2Q2Q8WVN8 375 aa13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 EPSTI1Q96J88 318 aa13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 SCNN1DP51172 638 aa13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 HS1BP3Q53T59 392 aa13.68□□□□□ -0.22
ATP1A3-208ENST00000545399 ZNF500O60304 480 aaPredicted RBP13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 PDIA4P13667 645 aaKnown RBP13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 NOSTRINQ8IVI9 506 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 KRI1Q8N9T8 703 aaKnown RBP13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 IGDCC4Q8TDY8 1250 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 WASF1Q92558 559 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 RTEL1Q9NZ71 1219 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 SMARCE1Q969G3 411 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 FUCA2Q9BTY2 467 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 ZMYND15Q9H091 742 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 FANCLQ9NW38 375 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 CDHR2Q9BYE9 1310 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 UTRNP46939 3433 aa13.67□□□□□ -0.22
ATP1A3-208ENST00000545399 TRIM75PA6NK02 468 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 CLEC10AQ8IUN9 316 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 MROH7-TTC4A0A0A0MT08 1334 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 PDE4BQ07343 736 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 SNW1Q13573 536 aaKnown RBP13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 VGLL2Q8N8G2 317 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 ZHX3Q9H4I2 956 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 HOOK1Q9UJC3 728 aaKnown RBP13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 ZNF804BA4D1E1 1349 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 CCT6AP40227 531 aaKnown RBP13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 TCP10Q12799 353 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 ZSCAN10Q96SZ4 725 aaPredicted RBP13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 UBA5Q9GZZ9 404 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 TACC3Q9Y6A5 838 aa13.66□□□□□ -0.22
ATP1A3-208ENST00000545399 LRRC37A3O60309 1634 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 VEGFAP15692 232 aaPredicted RBP13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 AMIGO3Q86WK7 504 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 BCL9O00512 1426 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 GTF2IP78347 998 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 FMR1NBQ8N0W7 255 aaPredicted RBP13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 ENAHQ8N8S7 591 aaPredicted RBP13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 C5P01031 1676 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 CCDC194A0A1B0GVG4 234 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 ARID4AP29374 1257 aaPredicted RBP13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 ADKP55263 362 aaKnown RBP13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 FANCCQ00597 558 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 SLC39A14Q15043 492 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 SHC4Q6S5L8 630 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
ATP1A3-208ENST00000545399 AFDNP55196 1824 aaKnown RBP13.65□□□□□ -0.23
ATP1A3-208ENST00000545399 DEXIO95424 95 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 PRR29P0C7W0 189 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 GNAT2P19087 354 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 MXD3Q9BW11 206 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 KDM3BQ7LBC6 1761 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 FAM196BA6NMK8 535 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 CACNB3P54284 484 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 KARSQ15046 597 aaKnown RBP13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 CEP135Q66GS9 1140 aa13.64□□□□□ -0.23
ATP1A3-208ENST00000545399 SYT10Q6XYQ8 523 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms