RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 NRXN2Q9P2S2 1712 aa19.33■□□□□ 0.69
CHFR-224ENST00000545046 DLEC1Q9Y238 1755 aa19.33■□□□□ 0.68
CHFR-224ENST00000545046 ORC4O43929 436 aa19.33■□□□□ 0.68
CHFR-224ENST00000545046 USP5P45974 858 aa19.33■□□□□ 0.68
CHFR-224ENST00000545046 KIF23Q02241 960 aaPredicted RBP19.33■□□□□ 0.68
CHFR-224ENST00000545046 KRT40Q6A162 431 aa19.33■□□□□ 0.68
CHFR-224ENST00000545046 FANCBQ8NB91 859 aa19.33■□□□□ 0.68
CHFR-224ENST00000545046 NUP133Q8WUM0 1156 aa19.33■□□□□ 0.68
CHFR-224ENST00000545046 AIFM3Q96NN9 605 aa19.33■□□□□ 0.68
CHFR-224ENST00000545046 FTOQ9C0B1 505 aaKnown RBP eCLIP19.33■□□□□ 0.68
CHFR-224ENST00000545046 POLLQ9UGP5 575 aa19.33■□□□□ 0.68
CHFR-224ENST00000545046 PDE4BQ07343 736 aa19.32■□□□□ 0.68
CHFR-224ENST00000545046 GNL2Q13823 731 aaKnown RBP19.32■□□□□ 0.68
CHFR-224ENST00000545046 MAP3K11Q16584 847 aa19.32■□□□□ 0.68
CHFR-224ENST00000545046 IFIT1BQ5T764 474 aaKnown RBP19.32■□□□□ 0.68
CHFR-224ENST00000545046 MYSM1Q5VVJ2 828 aa19.32■□□□□ 0.68
CHFR-224ENST00000545046 TNMDQ9H2S6 317 aa19.32■□□□□ 0.68
CHFR-224ENST00000545046 PARP3Q9Y6F1 533 aa19.32■□□□□ 0.68
CHFR-224ENST00000545046 PRDM1O75626 825 aa19.32■□□□□ 0.68
CHFR-224ENST00000545046 CERS3Q8IU89 383 aa19.32■□□□□ 0.68
CHFR-224ENST00000545046 MCM9Q9NXL9 1143 aa19.32■□□□□ 0.68
CHFR-224ENST00000545046 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.32■□□□□ 0.68
CHFR-224ENST00000545046 MYH6P13533 1939 aa19.31■□□□□ 0.68
CHFR-224ENST00000545046 NPR1P16066 1061 aa19.31■□□□□ 0.68
CHFR-224ENST00000545046 PDE6BP35913 854 aa19.31■□□□□ 0.68
CHFR-224ENST00000545046 ME1P48163 572 aa19.31■□□□□ 0.68
CHFR-224ENST00000545046 PPP4CP60510 307 aa19.31■□□□□ 0.68
CHFR-224ENST00000545046 CAMK4Q16566 473 aa19.31■□□□□ 0.68
CHFR-224ENST00000545046 UVSSAQ2YD98 709 aa19.31■□□□□ 0.68
CHFR-224ENST00000545046 ENAHQ8N8S7 591 aaPredicted RBP19.31■□□□□ 0.68
CHFR-224ENST00000545046 NR1I2O75469 434 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 CCDC192P0DO97 292 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 DIXDC1Q155Q3 683 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 CATIPQ7Z7H3 387 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 CCAR1Q8IX12 1150 aaKnown RBP19.3■□□□□ 0.68
CHFR-224ENST00000545046 AMOTL1Q8IY63 956 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 FUCA2Q9BTY2 467 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 CLSTN2Q9H4D0 955 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 POLR3EQ9NVU0 708 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 ATP6V0A2Q9Y487 856 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 KIF28PB7ZC32 967 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 SRGNP10124 158 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 ALDH1B1P30837 517 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 STK38Q15208 465 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 FAM43AQ8N2R8 423 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 SH3RF3Q8TEJ3 882 aaPredicted RBP19.3■□□□□ 0.68
CHFR-224ENST00000545046 TBC1D22AQ8WUA7 517 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 TAOK2Q9UL54 1235 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 MROH7-TTC4A0A0A0MT08 1334 aa19.3■□□□□ 0.68
CHFR-224ENST00000545046 YEATS4O95619 227 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 CALM1P0DP23 149 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 CALM2P0DP24 149 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 CALM3P0DP25 149 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 SF3A1Q15459 793 aaKnown RBP19.29■□□□□ 0.68
CHFR-224ENST00000545046 GRIK5Q16478 980 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 CCDC73Q6ZRK6 1079 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 SLF2Q8IX21 1173 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 CRACR2BQ8N4Y2 399 aaPredicted RBP19.29■□□□□ 0.68
CHFR-224ENST00000545046 LTBP1Q14766 1721 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 DEXIO95424 95 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 MMP10P09238 476 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 USP17L8P0C7I0 530 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 CYP2D6P10635 497 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 LINC00301Q8NCQ3 95 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 KCNG4Q8TDN1 519 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 CLIC4Q9Y696 253 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 NAV1Q8NEY1 1877 aa19.29■□□□□ 0.68
CHFR-224ENST00000545046 NT5C2P49902 561 aa19.28■□□□□ 0.68
CHFR-224ENST00000545046 C12orf60Q5U649 245 aa19.28■□□□□ 0.68
CHFR-224ENST00000545046 TMX4Q9H1E5 349 aaPredicted RBP19.28■□□□□ 0.68
CHFR-224ENST00000545046 SAFBQ15424 915 aaKnown RBP eCLIP19.27■□□□□ 0.68
CHFR-224ENST00000545046 MFSD14BQ5SR56 506 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 NBPF11Q86T75 865 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 CCDC82Q8N4S0 544 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 FBXO41Q8TF61 875 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 RBM28Q9NW13 759 aaKnown RBP19.27■□□□□ 0.68
CHFR-224ENST00000545046 MKRN1Q9UHC7 482 aaKnown RBP19.27■□□□□ 0.68
CHFR-224ENST00000545046 TSPY2A6NKD2 308 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 AKAP17AQ02040 695 aaKnown RBP19.27■□□□□ 0.68
CHFR-224ENST00000545046 ANO1Q5XXA6 986 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 ADALQ6DHV7 355 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 MPNDQ8N594 471 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 RTFDC1Q9BY42 306 aaPredicted RBP19.27■□□□□ 0.68
CHFR-224ENST00000545046 PCDHA7Q9UN72 937 aa19.27■□□□□ 0.68
CHFR-224ENST00000545046 TNS1Q9HBL0 1735 aaKnown RBP19.27■□□□□ 0.68
CHFR-224ENST00000545046 CDK5RAP2Q96SN8 1893 aa19.27■□□□□ 0.67
CHFR-224ENST00000545046 RGPD3A6NKT7 1758 aaPredicted RBP19.26■□□□□ 0.67
CHFR-224ENST00000545046 RGPD4Q7Z3J3 1758 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 SPTLC2O15270 562 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 PLCG2P16885 1265 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 U2AF2P26368 475 aaKnown RBP eCLIP19.26■□□□□ 0.67
CHFR-224ENST00000545046 BTDP43251 543 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 EVX2Q03828 476 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 FAM47AQ5JRC9 791 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 TGFBRAP1Q8WUH2 860 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 PDLIM2Q96JY6 352 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 COA1Q9GZY4 146 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 DDAH1O94760 285 aa19.26■□□□□ 0.67
CHFR-224ENST00000545046 RBM43Q6ZSC3 357 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms