RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 ATP2B4P23634 1241 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 USP46P62068 366 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 MTMR3Q13615 1198 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 HLFQ16534 295 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 MCTP1Q6DN14 999 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 CTR9Q6PD62 1173 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 GAS2L2Q8NHY3 880 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 COL25A1Q9BXS0 654 aaPredicted RBP5.46□□□□□ -1.54
CNGA1-209ENST00000544810 TMX4Q9H1E5 349 aaPredicted RBP5.46□□□□□ -1.54
CNGA1-209ENST00000544810 TSPY26PQ9H489 355 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 PTPN22Q9Y2R2 807 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 ASTN2O75129 1339 aaPredicted RBP5.46□□□□□ -1.54
CNGA1-209ENST00000544810 U2AF2P26368 475 aaKnown RBP eCLIP5.46□□□□□ -1.54
CNGA1-209ENST00000544810 TEFQ10587 303 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 SREBF2Q12772 1141 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 PTK7Q13308 1070 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 ELOAQ14241 798 aaKnown RBP5.46□□□□□ -1.54
CNGA1-209ENST00000544810 KIF4BQ2VIQ3 1234 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 PUS10Q3MIT2 529 aaKnown RBP5.46□□□□□ -1.54
CNGA1-209ENST00000544810 AXDND1Q5T1B0 1012 aaPredicted RBP5.46□□□□□ -1.54
CNGA1-209ENST00000544810 DPP8Q6V1X1 898 aaPredicted RBP5.46□□□□□ -1.54
CNGA1-209ENST00000544810 NPAS4Q8IUM7 802 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 GPT2Q8TD30 523 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 USP16Q9Y5T5 823 aa5.46□□□□□ -1.54
CNGA1-209ENST00000544810 AK9Q5TCS8 1911 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 PSMD14O00487 310 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 KCNQ3O43525 872 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 RPS12P25398 132 aaKnown RBP5.45□□□□□ -1.54
CNGA1-209ENST00000544810 NUCB1Q02818 461 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 TSNAXIP1Q2TAA8 658 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 NBPF10Q6P3W6 841 aaKnown RBP5.45□□□□□ -1.54
CNGA1-209ENST00000544810 MOB2Q70IA6 237 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 PACS2Q86VP3 889 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 FAM200AQ8TCP9 573 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 TMEM63CQ9P1W3 806 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 DDX19BQ9UMR2 479 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 UBE2Q2LH0YL09 131 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 H3BRB1 525 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 CLGNO14967 610 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 RLBP1P12271 317 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 KRT222Q8N1A0 295 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 MPNDQ8N594 471 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 PNMA1Q8ND90 353 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 IL17REQ8NFR9 667 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 KIAA1524Q8TCG1 905 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 ZNF333Q96JL9 665 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 TUT1Q9H6E5 874 aaKnown RBP5.45□□□□□ -1.54
CNGA1-209ENST00000544810 USP25Q9UHP3 1055 aa5.45□□□□□ -1.54
CNGA1-209ENST00000544810 TRIOBPQ9H2D6 2365 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 DUOX1Q9NRD9 1551 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 SOX1O00570 391 aaPredicted RBP5.44□□□□□ -1.54
CNGA1-209ENST00000544810 HMOX1P09601 288 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 DPYDQ12882 1025 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 NR1H3Q13133 447 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 SLFNL1Q499Z3 407 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 ZKSCAN2Q63HK3 967 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 ERO1AQ96HE7 468 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 ABCC4O15439 1325 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 FAM196BA6NMK8 535 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 SMTNL1A8MU46 457 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 PPP1R3GB7ZBB8 358 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 ALDH1A1P00352 501 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 CAPN2P17655 700 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 PTPREP23469 700 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 NCBP1Q09161 790 aaKnown RBP5.44□□□□□ -1.54
CNGA1-209ENST00000544810 TSGA10IPQ3SY00 556 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 SP8Q8IXZ3 490 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 DZIP1LQ8IYY4 767 aaKnown RBP5.44□□□□□ -1.54
CNGA1-209ENST00000544810 CHMP4AQ9BY43 222 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 BCCIPQ9P287 314 aaKnown RBP eCLIP5.44□□□□□ -1.54
CNGA1-209ENST00000544810 MAP10Q9P2G4 905 aa5.44□□□□□ -1.54
CNGA1-209ENST00000544810 UBN2Q6ZU65 1347 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 A0A1W2PPC1 479 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 SYCE3A1L190 88 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 CD2BP2O95400 341 aaKnown RBP5.43□□□□□ -1.54
CNGA1-209ENST00000544810 NTSR2O95665 410 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 ANGEL2Q5VTE6 544 aaKnown RBP5.43□□□□□ -1.54
CNGA1-209ENST00000544810 SUSD4Q5VX71 490 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 KIF18AQ8NI77 898 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 CD99L2Q8TCZ2 262 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 LRCH3Q96II8 777 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 MKNK1Q9BUB5 465 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 KIAA1468Q9P260 1216 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 PAXBP1Q9Y5B6 917 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 RTL9Q8NET4 1388 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 CUL9Q8IWT3 2517 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 SIPA1L3O60292 1781 aaPredicted RBP5.43□□□□□ -1.54
CNGA1-209ENST00000544810 CEMIPQ8WUJ3 1361 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 ZBBXA8MT70 800 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 PRPF40AO75400 957 aaKnown RBP5.43□□□□□ -1.54
CNGA1-209ENST00000544810 RECKO95980 971 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 SNRPA1P09661 255 aaKnown RBP5.43□□□□□ -1.54
CNGA1-209ENST00000544810 CLDN10P78369 228 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 MUM1L1Q5H9M0 696 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 SECISBP2LQ93073 1101 aaKnown RBP5.43□□□□□ -1.54
CNGA1-209ENST00000544810 KCNK17Q96T54 332 aa5.43□□□□□ -1.54
CNGA1-209ENST00000544810 GNAT3A8MTJ3 354 aa5.42□□□□□ -1.54
CNGA1-209ENST00000544810 GOLGA6L6A8MZA4 724 aa5.42□□□□□ -1.54
CNGA1-209ENST00000544810 ERVV-1B6SEH8 477 aa5.42□□□□□ -1.54
CNGA1-209ENST00000544810 BBOX1O75936 387 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms