RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MRPS25P82663 173 aaKnown RBP14.35□□□□□ -0.11
SMG8-202ENST00000543872 OVOS2Q6IE36 1432 aa14.35□□□□□ -0.11
SMG8-202ENST00000543872 BABAM1Q9NWV8 329 aa14.35□□□□□ -0.11
SMG8-202ENST00000543872 TFR2Q9UP52 801 aa14.35□□□□□ -0.11
SMG8-202ENST00000543872 MYO1BO43795 1136 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 A1BGP04217 495 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 FXR1P51114 621 aaKnown RBP eCLIP14.34□□□□□ -0.11
SMG8-202ENST00000543872 PPARDQ03181 441 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 TUBB2AQ13885 445 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 TTC39AQ5SRH9 613 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 KRT40Q6A162 431 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 CAGE1Q8TC20 777 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 ENOX1Q8TC92 643 aaKnown RBP14.34□□□□□ -0.11
SMG8-202ENST00000543872 COG1Q8WTW3 980 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 TUBB2BQ9BVA1 445 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 MLH3Q9UHC1 1453 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 PEAK1Q9H792 1746 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 TMEM131LA2VDJ0 1609 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 TUBBP07437 444 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 RDXP35241 583 aaKnown RBP14.34□□□□□ -0.11
SMG8-202ENST00000543872 USP14P54578 494 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 TRDNQ13061 729 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 RESP18Q5W5W9 173 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 RASGRP2Q7LDG7 609 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 OTUD6BQ8N6M0 293 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 MED15Q96RN5 788 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 MMS19Q96T76 1030 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 CD248Q9HCU0 757 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 KIAA0754O94854 1291 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 TIMM10P62072 90 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 GRIN1Q05586 938 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 WASHC4Q2M389 1173 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 CPLX2Q6PUV4 134 aaKnown RBP14.34□□□□□ -0.11
SMG8-202ENST00000543872 HAUS7Q99871 368 aa14.34□□□□□ -0.11
SMG8-202ENST00000543872 TTF2Q9UNY4 1162 aaKnown RBP14.34□□□□□ -0.11
SMG8-202ENST00000543872 GOLGA6BA6NDN3 693 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 HOXC9P31274 260 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 MLKLQ8NB16 471 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 CALR3Q96L12 384 aaKnown RBP14.33□□□□□ -0.12
SMG8-202ENST00000543872 MYD88Q99836 296 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 DACH1Q9UI36 760 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 NRKQ7Z2Y5 1582 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 ABCC6O95255 1503 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 NDUFAB1O14561 156 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 ZEB2O60315 1214 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 MYBL2P10244 700 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 CASP1P29466 404 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 AFMP43652 599 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 AARSP49588 968 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMG8-202ENST00000543872 WDR93Q6P2C0 686 aa14.33□□□□□ -0.12
SMG8-202ENST00000543872 RALYLQ86SE5 291 aaKnown RBP14.33□□□□□ -0.12
SMG8-202ENST00000543872 NUP88Q99567 741 aaPredicted RBP14.33□□□□□ -0.12
SMG8-202ENST00000543872 PPP1R12AO14974 1030 aaPredicted RBP14.32□□□□□ -0.12
SMG8-202ENST00000543872 MFAP3LO75121 409 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 DDX58O95786 925 aaKnown RBP14.32□□□□□ -0.12
SMG8-202ENST00000543872 PTPAQ15257 358 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 FILIP1LQ4L180 1135 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 RNF187Q5TA31 235 aaPredicted RBP14.32□□□□□ -0.12
SMG8-202ENST00000543872 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 SMYD4Q8IYR2 804 aaPredicted RBP14.32□□□□□ -0.12
SMG8-202ENST00000543872 DSCC1Q9BVC3 393 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 SELENOOQ9BVL4 669 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 PAG1Q9NWQ8 432 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 HPS5Q9UPZ3 1129 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 CACNA1FO60840 1977 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 IGKV5-2P06315 115 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 NEXNQ0ZGT2 675 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 VIPAS39Q9H9C1 493 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 A0A1B0GTH6 734 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 ZNF530Q6P9A1 599 aaPredicted RBP14.32□□□□□ -0.12
SMG8-202ENST00000543872 ANKRD24Q8TF21 1146 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 CABS1Q96KC9 395 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 SLC24A3Q9HC58 644 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 SH3BP1Q9Y3L3 701 aa14.32□□□□□ -0.12
SMG8-202ENST00000543872 UBE2Q2LH0YL09 131 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 PPP6R2O75170 966 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 PIP4K2AP48426 406 aaPredicted RBP14.31□□□□□ -0.12
SMG8-202ENST00000543872 ATP1A2P50993 1020 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 SND1Q7KZF4 910 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMG8-202ENST00000543872 NAA15Q9BXJ9 866 aaKnown RBP14.31□□□□□ -0.12
SMG8-202ENST00000543872 WWC3Q9ULE0 1092 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 AGPSO00116 658 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 PES1O00541 588 aaKnown RBP14.31□□□□□ -0.12
SMG8-202ENST00000543872 ERVK-24P63145 666 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 PDCLQ13371 301 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 TRIM29Q14134 588 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 KRI1Q8N9T8 703 aaKnown RBP14.31□□□□□ -0.12
SMG8-202ENST00000543872 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
SMG8-202ENST00000543872 NBPF3Q9H094 633 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 VPS16Q9H269 839 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 SEC31BQ9NQW1 1179 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 PLEKHG3A1L390 1219 aa14.31□□□□□ -0.12
SMG8-202ENST00000543872 FKBP4Q02790 459 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMG8-202ENST00000543872 USP6P35125 1406 aa14.3□□□□□ -0.12
SMG8-202ENST00000543872 MAST3O60307 1309 aa14.3□□□□□ -0.12
SMG8-202ENST00000543872 N4BP3O15049 544 aa14.3□□□□□ -0.12
SMG8-202ENST00000543872 ARHGAP25P42331 645 aa14.3□□□□□ -0.12
SMG8-202ENST00000543872 MATR3P43243 847 aaKnown RBP eCLIP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms