RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ZNF280CQ8ND82 737 aa27.87■■■□□ 2.05
CDKN3-207ENST00000543789 TBC1D2Q9BYX2 928 aa27.87■■■□□ 2.05
CDKN3-207ENST00000543789 MYH2Q9UKX2 1941 aa27.86■■■□□ 2.05
CDKN3-207ENST00000543789 TRIM27P14373 513 aa27.86■■■□□ 2.05
CDKN3-207ENST00000543789 CAPN2P17655 700 aa27.86■■■□□ 2.05
CDKN3-207ENST00000543789 LRP2BPQ9P2M1 347 aa27.86■■■□□ 2.05
CDKN3-207ENST00000543789 NR2E3Q9Y5X4 410 aa27.86■■■□□ 2.05
CDKN3-207ENST00000543789 TFRCP02786 760 aaKnown RBP27.85■■■□□ 2.05
CDKN3-207ENST00000543789 UQCRFS1P1P0C7P4 283 aa27.85■■■□□ 2.05
CDKN3-207ENST00000543789 CAP2P40123 477 aa27.85■■■□□ 2.05
CDKN3-207ENST00000543789 FAM110CQ1W6H9 321 aa27.85■■■□□ 2.05
CDKN3-207ENST00000543789 TEX11Q8IYF3 940 aa27.85■■■□□ 2.05
CDKN3-207ENST00000543789 RBM27Q9P2N5 1060 aaKnown RBP27.85■■■□□ 2.05
CDKN3-207ENST00000543789 TAOK2Q9UL54 1235 aa27.85■■■□□ 2.05
CDKN3-207ENST00000543789 PNMA6EA0A0J9YXQ4 647 aa27.84■■■□□ 2.05
CDKN3-207ENST00000543789 MCAMP43121 646 aa27.84■■■□□ 2.05
CDKN3-207ENST00000543789 PABPC4Q13310 644 aaKnown RBP eCLIP27.84■■■□□ 2.05
CDKN3-207ENST00000543789 ATF7IPQ6VMQ6 1270 aa27.84■■■□□ 2.05
CDKN3-207ENST00000543789 GCLCP48506 637 aaPredicted RBP27.83■■■□□ 2.05
CDKN3-207ENST00000543789 FRAT1Q92837 279 aaPredicted RBP27.83■■■□□ 2.05
CDKN3-207ENST00000543789 DEFB118Q96PH6 123 aa27.83■■■□□ 2.05
CDKN3-207ENST00000543789 NOL10Q9BSC4 688 aaKnown RBP27.83■■■□□ 2.05
CDKN3-207ENST00000543789 HERC5Q9UII4 1024 aaKnown RBP27.83■■■□□ 2.05
CDKN3-207ENST00000543789 DOCK2Q92608 1830 aa27.83■■■□□ 2.05
CDKN3-207ENST00000543789 USP17L5A8MUK1 530 aa27.82■■■□□ 2.04
CDKN3-207ENST00000543789 HMGCS2P54868 508 aa27.82■■■□□ 2.04
CDKN3-207ENST00000543789 RRP1BQ14684 758 aaKnown RBP27.82■■■□□ 2.04
CDKN3-207ENST00000543789 PI4KBQ9UBF8 816 aa27.82■■■□□ 2.04
CDKN3-207ENST00000543789 COL2A1P02458 1487 aaPredicted RBP27.82■■■□□ 2.04
CDKN3-207ENST00000543789 CCER2I3L3R5 266 aa27.81■■■□□ 2.04
CDKN3-207ENST00000543789 SH3RF3Q8TEJ3 882 aaPredicted RBP27.81■■■□□ 2.04
CDKN3-207ENST00000543789 DHX36Q9H2U1 1008 aaKnown RBP27.81■■■□□ 2.04
CDKN3-207ENST00000543789 PAK6Q9NQU5 681 aaPredicted RBP27.81■■■□□ 2.04
CDKN3-207ENST00000543789 TNNQ9UQP3 1299 aa27.81■■■□□ 2.04
CDKN3-207ENST00000543789 CEP290O15078 2479 aa27.81■■■□□ 2.04
CDKN3-207ENST00000543789 BCAR3O75815 825 aa27.8■■■□□ 2.04
CDKN3-207ENST00000543789 BAG3O95817 575 aa27.8■■■□□ 2.04
CDKN3-207ENST00000543789 SH3D19Q5HYK7 790 aa27.8■■■□□ 2.04
CDKN3-207ENST00000543789 CLUAP1Q96AJ1 413 aa27.8■■■□□ 2.04
CDKN3-207ENST00000543789 ASCC2Q9H1I8 757 aaPredicted RBP27.8■■■□□ 2.04
CDKN3-207ENST00000543789 AS3MTQ9HBK9 375 aa27.8■■■□□ 2.04
CDKN3-207ENST00000543789 ZBTB7BO15156 539 aaPredicted RBP27.79■■■□□ 2.04
CDKN3-207ENST00000543789 NAA16Q6N069 864 aaPredicted RBP27.79■■■□□ 2.04
CDKN3-207ENST00000543789 SNRKQ9NRH2 765 aa27.79■■■□□ 2.04
CDKN3-207ENST00000543789 PLCG2P16885 1265 aa27.78■■■□□ 2.04
CDKN3-207ENST00000543789 CCDC158Q5M9N0 1113 aa27.78■■■□□ 2.04
CDKN3-207ENST00000543789 TTC39AQ5SRH9 613 aa27.78■■■□□ 2.04
CDKN3-207ENST00000543789 CRISPLD2Q9H0B8 497 aa27.78■■■□□ 2.04
CDKN3-207ENST00000543789 GPR108Q9NPR9 543 aa27.78■■■□□ 2.04
CDKN3-207ENST00000543789 AATFQ9NY61 560 aaKnown RBP eCLIP27.78■■■□□ 2.04
CDKN3-207ENST00000543789 EVI5O60447 810 aa27.77■■■□□ 2.04
CDKN3-207ENST00000543789 PPP4CP60510 307 aa27.77■■■□□ 2.04
CDKN3-207ENST00000543789 WDR18Q9BV38 432 aa27.77■■■□□ 2.04
CDKN3-207ENST00000543789 PRO3102Q9H379 93 aa27.77■■■□□ 2.04
CDKN3-207ENST00000543789 TRIOBPQ9H2D6 2365 aa27.76■■■□□ 2.03
CDKN3-207ENST00000543789 TGFBRAP1Q8WUH2 860 aa27.76■■■□□ 2.03
CDKN3-207ENST00000543789 GJD2Q9UKL4 321 aa27.76■■■□□ 2.03
CDKN3-207ENST00000543789 DOCK1Q14185 1865 aa27.76■■■□□ 2.03
CDKN3-207ENST00000543789 ASNSP08243 561 aa27.75■■■□□ 2.03
CDKN3-207ENST00000543789 BACE1P56817 501 aa27.75■■■□□ 2.03
CDKN3-207ENST00000543789 TNNI3KQ59H18 835 aa27.75■■■□□ 2.03
CDKN3-207ENST00000543789 FOXP4Q8IVH2 680 aaPredicted RBP27.75■■■□□ 2.03
CDKN3-207ENST00000543789 TMOD4Q9NZQ9 345 aa27.75■■■□□ 2.03
CDKN3-207ENST00000543789 FPGT-TNNI3KV9GXZ4 949 aa27.75■■■□□ 2.03
CDKN3-207ENST00000543789 HMGCRP04035 888 aa27.74■■■□□ 2.03
CDKN3-207ENST00000543789 OS9Q13438 667 aaPredicted RBP27.74■■■□□ 2.03
CDKN3-207ENST00000543789 MTMR2Q13614 643 aa27.74■■■□□ 2.03
CDKN3-207ENST00000543789 POLA2Q14181 598 aa27.74■■■□□ 2.03
CDKN3-207ENST00000543789 TMEM57Q8N5G2 664 aa27.74■■■□□ 2.03
CDKN3-207ENST00000543789 PAWRQ96IZ0 340 aaKnown RBP27.74■■■□□ 2.03
CDKN3-207ENST00000543789 DBNDD2Q9BQY9 259 aa27.74■■■□□ 2.03
CDKN3-207ENST00000543789 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.74■■■□□ 2.03
CDKN3-207ENST00000543789 CYP2E1P05181 493 aaPredicted RBP27.73■■■□□ 2.03
CDKN3-207ENST00000543789 IRX3P78415 501 aaPredicted RBP27.73■■■□□ 2.03
CDKN3-207ENST00000543789 NECAB2Q7Z6G3 386 aa27.73■■■□□ 2.03
CDKN3-207ENST00000543789 METTL16Q86W50 562 aaKnown RBP27.73■■■□□ 2.03
CDKN3-207ENST00000543789 MAPKAPK5Q8IW41 473 aa27.73■■■□□ 2.03
CDKN3-207ENST00000543789 TRIM34Q9BYJ4 488 aa27.73■■■□□ 2.03
CDKN3-207ENST00000543789 MORF4L1Q9UBU8 362 aa27.73■■■□□ 2.03
CDKN3-207ENST00000543789 MGAMO43451 1857 aa27.72■■■□□ 2.03
CDKN3-207ENST00000543789 PHIPQ8WWQ0 1821 aa27.72■■■□□ 2.03
CDKN3-207ENST00000543789 HOXA7P31268 230 aaPredicted RBP27.72■■■□□ 2.03
CDKN3-207ENST00000543789 ATP8B2P98198 1209 aa27.72■■■□□ 2.03
CDKN3-207ENST00000543789 CRACR2BQ8N4Y2 399 aaPredicted RBP27.72■■■□□ 2.03
CDKN3-207ENST00000543789 SSH3Q8TE77 659 aa27.72■■■□□ 2.03
CDKN3-207ENST00000543789 GINM1Q9NU53 330 aa27.72■■■□□ 2.03
CDKN3-207ENST00000543789 FLT1P17948 1338 aa27.71■■■□□ 2.03
CDKN3-207ENST00000543789 RPTORQ8N122 1335 aa27.71■■■□□ 2.03
CDKN3-207ENST00000543789 C19orf81C9J6K1 198 aa27.71■■■□□ 2.03
CDKN3-207ENST00000543789 IGSF3O75054 1194 aa27.71■■■□□ 2.03
CDKN3-207ENST00000543789 SURF6O75683 361 aaKnown RBP27.71■■■□□ 2.03
CDKN3-207ENST00000543789 JAG1P78504 1218 aa27.71■■■□□ 2.03
CDKN3-207ENST00000543789 ZKSCAN2Q63HK3 967 aa27.71■■■□□ 2.03
CDKN3-207ENST00000543789 ADGRA1Q86SQ6 560 aa27.71■■■□□ 2.03
CDKN3-207ENST00000543789 ZNF512BQ96KM6 892 aaPredicted RBP27.71■■■□□ 2.03
CDKN3-207ENST00000543789 P2RX7Q99572 595 aaKnown RBP27.71■■■□□ 2.03
CDKN3-207ENST00000543789 HMX1Q9NP08 348 aaPredicted RBP27.71■■■□□ 2.03
CDKN3-207ENST00000543789 PALD1Q9ULE6 856 aa27.71■■■□□ 2.03
CDKN3-207ENST00000543789 ANKLE1Q8NAG6 615 aa27.7■■■□□ 2.02
CDKN3-207ENST00000543789 DNAJC18Q9H819 358 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms