RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 HAUS4Q9H6D7 363 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 INTS13Q9NVM9 706 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 GGA2Q9UJY4 613 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 FPGT-TNNI3KV9GXZ4 949 aa5.66□□□□□ -1.5
LMO3-229ENST00000543721 SRRM3A6NNA2 597 aaPredicted RBP5.65□□□□□ -1.5
LMO3-229ENST00000543721 MFAP3LO75121 409 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 PHACTR2O75167 634 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 SYF2O95926 243 aaKnown RBP5.65□□□□□ -1.5
LMO3-229ENST00000543721 IRAK1P51617 712 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 PNOCQ13519 176 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 E2F4Q16254 413 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 ZMYM1Q5SVZ6 1142 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 SPATA1Q5VX52 437 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 UBE3BQ7Z3V4 1068 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 OTUD6BQ8N6M0 293 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 PRPF38AQ8NAV1 312 aaKnown RBP5.65□□□□□ -1.5
LMO3-229ENST00000543721 DESI2Q9BSY9 194 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 GPR108Q9NPR9 543 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 GNL3LQ9NVN8 582 aaKnown RBP5.65□□□□□ -1.5
LMO3-229ENST00000543721 SUFUQ9UMX1 484 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 CEP131Q9UPN4 1083 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 COL15A1P39059 1388 aa5.65□□□□□ -1.5
LMO3-229ENST00000543721 OVOS2A0A0G2JMS6 1433 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 LRRIQ3A6PVS8 624 aaPredicted RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 FSBPO95073 299 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 LIG3P49916 1009 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 COL9A3Q14050 684 aaPredicted RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 POSTNQ15063 836 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 IMMTQ16891 758 aaKnown RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 TTC39AQ5SRH9 613 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 ISM2Q6H9L7 571 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 ZNF662Q6ZS27 426 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 RALYLQ86SE5 291 aaKnown RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 ZNF579Q8NAF0 562 aaKnown RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 RUFY1Q96T51 708 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 NCOA5Q9HCD5 579 aaKnown RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 MAN1B1Q9UKM7 699 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 AGLP35573 1532 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 METP08581 1390 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 GOLGA6BA6NDN3 693 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 KIF3CO14782 793 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 EIF3HO15372 352 aaKnown RBP eCLIP5.65□□□□□ -1.51
LMO3-229ENST00000543721 ZEB2O60315 1214 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 ZFYP08048 801 aaPredicted RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 CCT5P48643 541 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 AKAP17AQ02040 695 aaKnown RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 MORC3Q14149 939 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 SAFBQ15424 915 aaKnown RBP eCLIP5.65□□□□□ -1.51
LMO3-229ENST00000543721 WASHC4Q2M389 1173 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 TSR1Q2NL82 804 aaKnown RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 ALS2CLQ60I27 953 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 SHC4Q6S5L8 630 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 METTL16Q86W50 562 aaKnown RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 BCAS4Q8TDM0 211 aa5.65□□□□□ -1.51
LMO3-229ENST00000543721 TLR7Q9NYK1 1049 aaKnown RBP5.65□□□□□ -1.51
LMO3-229ENST00000543721 KDM3BQ7LBC6 1761 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 KLF18A0A0U1RQI7 1052 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 GOLGA6L7A0A1B0GV03 622 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 SOWAHDA6NJG2 315 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 BTBD11A6QL63 1104 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 GOLGA8BA8MQT2 603 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 PSMD14O00487 310 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 MARCKSP29966 332 aaPredicted RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 NF2P35240 595 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 SARSP49591 514 aaKnown RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 KRT83P78385 493 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 SKOR1P84550 965 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 GOLGA8FQ08AF8 430 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 GOLGA8DPQ0D2H9 430 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 PTPAQ15257 358 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 NBPF6Q5VWK0 638 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 RAD9BQ6WBX8 426 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 NCOA7Q8NI08 942 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 NBPF4Q96M43 638 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 PAGR1Q9BTK6 254 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 DDX21Q9NR30 783 aaKnown RBP eCLIP5.64□□□□□ -1.51
LMO3-229ENST00000543721 FAM184BQ9ULE4 1060 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 SAR1BQ9Y6B6 198 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 RIMS1Q86UR5 1692 aaKnown RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 LAMA4Q16363 1823 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 ANO9A1A5B4 782 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 EPB41P11171 864 aaKnown RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 HOXC9P31274 260 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 CDR1P51861 262 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 AMPD2Q01433 879 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 ITIH3Q06033 890 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 AMOTQ4VCS5 1084 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 PLEKHO1Q53GL0 409 aaPredicted RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 AKAP4Q5JQC9 854 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 FBXO31Q5XUX0 539 aaPredicted RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 TAX1BP1Q86VP1 789 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 FMNL3Q8IVF7 1028 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 SEC62Q99442 399 aaKnown RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 ALG1Q9BT22 464 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 ESF1Q9H501 851 aaKnown RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 BCCIPQ9P287 314 aaKnown RBP eCLIP5.64□□□□□ -1.51
LMO3-229ENST00000543721 DBNLQ9UJU6 430 aaKnown RBP5.64□□□□□ -1.51
LMO3-229ENST00000543721 MROH7-TTC4A0A0A0MT08 1334 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 NCKAP5LQ9HCH0 1330 aa5.64□□□□□ -1.51
LMO3-229ENST00000543721 PITPNM1O00562 1244 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms