RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 GRK4P32298 578 aa22.89■■□□□ 1.25
LTBR-211ENST00000543190 SH3D19Q5HYK7 790 aa22.89■■□□□ 1.25
LTBR-211ENST00000543190 CERS3Q8IU89 383 aa22.89■■□□□ 1.25
LTBR-211ENST00000543190 SH3TC2Q8TF17 1288 aa22.89■■□□□ 1.25
LTBR-211ENST00000543190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.89■■□□□ 1.25
LTBR-211ENST00000543190 PI4KBQ9UBF8 816 aa22.89■■□□□ 1.25
LTBR-211ENST00000543190 MYH1P12882 1939 aa22.88■■□□□ 1.25
LTBR-211ENST00000543190 MYPNQ86TC9 1320 aa22.88■■□□□ 1.25
LTBR-211ENST00000543190 CYP2E1P05181 493 aaPredicted RBP22.88■■□□□ 1.25
LTBR-211ENST00000543190 HNRNPUQ00839 825 aaKnown RBP eCLIP22.88■■□□□ 1.25
LTBR-211ENST00000543190 FTSJ3Q8IY81 847 aaKnown RBP22.88■■□□□ 1.25
LTBR-211ENST00000543190 NKX2-3Q8TAU0 364 aa22.88■■□□□ 1.25
LTBR-211ENST00000543190 DBNDD2Q9BQY9 259 aa22.88■■□□□ 1.25
LTBR-211ENST00000543190 SURF6O75683 361 aaKnown RBP22.87■■□□□ 1.25
LTBR-211ENST00000543190 FMNL1O95466 1100 aaPredicted RBP22.87■■□□□ 1.25
LTBR-211ENST00000543190 RLBP1P12271 317 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 IRF5Q13568 498 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 FAM110CQ1W6H9 321 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 SLC4A8Q2Y0W8 1093 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 TTC39AQ5SRH9 613 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 NAA16Q6N069 864 aaPredicted RBP22.87■■□□□ 1.25
LTBR-211ENST00000543190 TEX11Q8IYF3 940 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 ZNF280CQ8ND82 737 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 SLAIN1Q8ND83 568 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 PXYLP1Q8TE99 480 aa22.87■■□□□ 1.25
LTBR-211ENST00000543190 DBNLQ9UJU6 430 aaKnown RBP22.87■■□□□ 1.25
LTBR-211ENST00000543190 GJB1P08034 283 aa22.86■■□□□ 1.25
LTBR-211ENST00000543190 SLURP2P0DP57 97 aa22.86■■□□□ 1.25
LTBR-211ENST00000543190 UBE2Q1Q7Z7E8 422 aa22.86■■□□□ 1.25
LTBR-211ENST00000543190 FOXP4Q8IVH2 680 aaPredicted RBP22.86■■□□□ 1.25
LTBR-211ENST00000543190 RAET1EQ8TD07 263 aa22.86■■□□□ 1.25
LTBR-211ENST00000543190 NOL10Q9BSC4 688 aaKnown RBP22.86■■□□□ 1.25
LTBR-211ENST00000543190 WDR18Q9BV38 432 aa22.86■■□□□ 1.25
LTBR-211ENST00000543190 PNMA3Q9UL41 463 aa22.86■■□□□ 1.25
LTBR-211ENST00000543190 TRIM75PA6NK02 468 aa22.85■■□□□ 1.25
LTBR-211ENST00000543190 GCLCP48506 637 aaPredicted RBP22.85■■□□□ 1.25
LTBR-211ENST00000543190 GADL1Q6ZQY3 521 aa22.85■■□□□ 1.25
LTBR-211ENST00000543190 SH3RF3Q8TEJ3 882 aaPredicted RBP22.85■■□□□ 1.25
LTBR-211ENST00000543190 USP17L5A8MUK1 530 aa22.84■■□□□ 1.25
LTBR-211ENST00000543190 ASNSP08243 561 aa22.84■■□□□ 1.25
LTBR-211ENST00000543190 GJA8P48165 433 aa22.84■■□□□ 1.25
LTBR-211ENST00000543190 PRKCZQ05513 592 aa22.84■■□□□ 1.25
LTBR-211ENST00000543190 PABPC4Q13310 644 aaKnown RBP eCLIP22.84■■□□□ 1.25
LTBR-211ENST00000543190 OS9Q13438 667 aaPredicted RBP22.84■■□□□ 1.25
LTBR-211ENST00000543190 MIER1Q8N108 512 aa22.84■■□□□ 1.25
LTBR-211ENST00000543190 SHISA4Q96DD7 197 aa22.84■■□□□ 1.25
LTBR-211ENST00000543190 FLT1P17948 1338 aa22.83■■□□□ 1.25
LTBR-211ENST00000543190 TRIOBPQ9H2D6 2365 aa22.83■■□□□ 1.25
LTBR-211ENST00000543190 SPP2Q13103 211 aa22.83■■□□□ 1.25
LTBR-211ENST00000543190 RRP1BQ14684 758 aaKnown RBP22.83■■□□□ 1.25
LTBR-211ENST00000543190 MTFR1Q15390 333 aa22.83■■□□□ 1.25
LTBR-211ENST00000543190 CEP85Q6P2H3 762 aa22.83■■□□□ 1.25
LTBR-211ENST00000543190 ADGRA1Q86SQ6 560 aa22.83■■□□□ 1.25
LTBR-211ENST00000543190 ITPRIPQ8IWB1 547 aa22.83■■□□□ 1.25
LTBR-211ENST00000543190 SMCR8Q8TEV9 937 aaPredicted RBP22.83■■□□□ 1.25
LTBR-211ENST00000543190 EAF2Q96CJ1 260 aaPredicted RBP22.83■■□□□ 1.25
LTBR-211ENST00000543190 AS3MTQ9HBK9 375 aa22.83■■□□□ 1.25
LTBR-211ENST00000543190 AATFQ9NY61 560 aaKnown RBP eCLIP22.83■■□□□ 1.25
LTBR-211ENST00000543190 UBXN2AP68543 259 aa22.82■■□□□ 1.24
LTBR-211ENST00000543190 TREML2Q5T2D2 321 aa22.82■■□□□ 1.24
LTBR-211ENST00000543190 ERC1Q8IUD2 1116 aa22.82■■□□□ 1.24
LTBR-211ENST00000543190 DNAJC18Q9H819 358 aa22.82■■□□□ 1.24
LTBR-211ENST00000543190 SNRKQ9NRH2 765 aa22.82■■□□□ 1.24
LTBR-211ENST00000543190 RANBP2P49792 3224 aaKnown RBP22.82■■□□□ 1.24
LTBR-211ENST00000543190 FAM196BA6NMK8 535 aa22.81■■□□□ 1.24
LTBR-211ENST00000543190 HOXA7P31268 230 aaPredicted RBP22.81■■□□□ 1.24
LTBR-211ENST00000543190 ZAP70P43403 619 aa22.81■■□□□ 1.24
LTBR-211ENST00000543190 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.81■■□□□ 1.24
LTBR-211ENST00000543190 DDX60LQ5H9U9 1706 aaKnown RBP22.81■■□□□ 1.24
LTBR-211ENST00000543190 MS4A1P11836 297 aa22.8■■□□□ 1.24
LTBR-211ENST00000543190 CCL5P13501 91 aa22.8■■□□□ 1.24
LTBR-211ENST00000543190 FLT3LGP49771 235 aa22.8■■□□□ 1.24
LTBR-211ENST00000543190 BACE1P56817 501 aa22.8■■□□□ 1.24
LTBR-211ENST00000543190 HABP4Q5JVS0 413 aaKnown RBP22.8■■□□□ 1.24
LTBR-211ENST00000543190 C1orf115Q9H7X2 142 aa22.8■■□□□ 1.24
LTBR-211ENST00000543190 PIH1D3Q9NQM4 214 aaKnown RBP22.8■■□□□ 1.24
LTBR-211ENST00000543190 MORF4L1Q9UBU8 362 aa22.8■■□□□ 1.24
LTBR-211ENST00000543190 GABRQQ9UN88 632 aa22.8■■□□□ 1.24
LTBR-211ENST00000543190 PLXNB2O15031 1838 aa22.8■■□□□ 1.24
LTBR-211ENST00000543190 C19orf81C9J6K1 198 aa22.79■■□□□ 1.24
LTBR-211ENST00000543190 TNPO2O14787 897 aaKnown RBP22.79■■□□□ 1.24
LTBR-211ENST00000543190 HSP90AB4PQ58FF6 505 aa22.79■■□□□ 1.24
LTBR-211ENST00000543190 DIEXFQ68CQ4 756 aaKnown RBP22.79■■□□□ 1.24
LTBR-211ENST00000543190 CCDC84Q86UT8 332 aaPredicted RBP22.79■■□□□ 1.24
LTBR-211ENST00000543190 TGFBRAP1Q8WUH2 860 aa22.79■■□□□ 1.24
LTBR-211ENST00000543190 EHD4Q9H223 541 aa22.79■■□□□ 1.24
LTBR-211ENST00000543190 TLR7Q9NYK1 1049 aaKnown RBP22.79■■□□□ 1.24
LTBR-211ENST00000543190 ADCY3O60266 1144 aa22.78■■□□□ 1.24
LTBR-211ENST00000543190 HMGCS2P54868 508 aa22.78■■□□□ 1.24
LTBR-211ENST00000543190 COA7Q96BR5 231 aa22.78■■□□□ 1.24
LTBR-211ENST00000543190 RNF208Q9H0X6 261 aa22.77■■□□□ 1.24
LTBR-211ENST00000543190 ASCC2Q9H1I8 757 aaPredicted RBP22.77■■□□□ 1.24
LTBR-211ENST00000543190 PAK6Q9NQU5 681 aaPredicted RBP22.77■■□□□ 1.24
LTBR-211ENST00000543190 TATDN1Q6P1N9 297 aa22.76■■□□□ 1.23
LTBR-211ENST00000543190 RPAP2Q8IXW5 612 aaPredicted RBP22.76■■□□□ 1.23
LTBR-211ENST00000543190 ANKRD13CQ8N6S4 541 aa22.76■■□□□ 1.23
LTBR-211ENST00000543190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.76■■□□□ 1.23
LTBR-211ENST00000543190 TAOK2Q9UL54 1235 aa22.76■■□□□ 1.23
LTBR-211ENST00000543190 PALD1Q9ULE6 856 aa22.76■■□□□ 1.23
LTBR-211ENST00000543190 SGPL1O95470 568 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms