RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 KIFC2Q96AC6 838 aa14.79□□□□□ -0.04
DDX11-223ENST00000542838 AIDAQ96BJ3 306 aa14.79□□□□□ -0.04
DDX11-223ENST00000542838 RAI14Q9P0K7 980 aa14.79□□□□□ -0.04
DDX11-223ENST00000542838 KCNJ14Q9UNX9 436 aa14.79□□□□□ -0.04
DDX11-223ENST00000542838 MMP1P03956 469 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 PDE6AP16499 860 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 ITGA6P23229 1130 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 PTPREP23469 700 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 GUCY1A2P33402 732 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 MORC3Q14149 939 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 RSRC2Q7L4I2 434 aaKnown RBP14.78□□□□□ -0.04
DDX11-223ENST00000542838 NUTM2AQ8IVF1 878 aaPredicted RBP14.78□□□□□ -0.04
DDX11-223ENST00000542838 ZBTB38Q8NAP3 1195 aaPredicted RBP14.78□□□□□ -0.04
DDX11-223ENST00000542838 SAMSN1Q9NSI8 373 aaKnown RBP14.78□□□□□ -0.04
DDX11-223ENST00000542838 FBXO2Q9UK22 296 aaPredicted RBP14.78□□□□□ -0.04
DDX11-223ENST00000542838 WWC3Q9ULE0 1092 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 TBC1D2BQ9UPU7 963 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 ATF3P18847 181 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 LIFRP42702 1097 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 CTDSPL2Q05D32 466 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 TRIM28Q13263 835 aaKnown RBP14.78□□□□□ -0.04
DDX11-223ENST00000542838 CCDC12Q8WUD4 166 aaPredicted RBP14.78□□□□□ -0.04
DDX11-223ENST00000542838 DHX58Q96C10 678 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 ZSWIM5Q9P217 1185 aa14.78□□□□□ -0.04
DDX11-223ENST00000542838 MAP3K15Q6ZN16 1313 aa14.77□□□□□ -0.04
DDX11-223ENST00000542838 OAS2P29728 719 aaKnown RBP14.77□□□□□ -0.04
DDX11-223ENST00000542838 SARSP49591 514 aaKnown RBP14.77□□□□□ -0.04
DDX11-223ENST00000542838 NT5DC1Q5TFE4 455 aa14.77□□□□□ -0.04
DDX11-223ENST00000542838 KIF6Q6ZMV9 814 aa14.77□□□□□ -0.04
DDX11-223ENST00000542838 CCDC34Q96HJ3 373 aa14.77□□□□□ -0.04
DDX11-223ENST00000542838 STRBPQ96SI9 672 aaKnown RBP14.77□□□□□ -0.04
DDX11-223ENST00000542838 PARD6BQ9BYG5 372 aa14.77□□□□□ -0.04
DDX11-223ENST00000542838 ARFGAP3Q9NP61 516 aa14.77□□□□□ -0.04
DDX11-223ENST00000542838 ZBTB22O15209 634 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 IFNAR1P17181 557 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 HNRNPH2P55795 449 aaKnown RBP14.77□□□□□ -0.05
DDX11-223ENST00000542838 GOLGA1Q92805 767 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 UBXN6Q9BZV1 441 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 GREM2Q9H772 168 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 ATP2B1P20020 1258 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 SMC1AQ14683 1233 aaKnown RBP14.77□□□□□ -0.05
DDX11-223ENST00000542838 RILPL1Q5EBL4 403 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 RABGGTAQ92696 567 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 ZNF512BQ96KM6 892 aaPredicted RBP14.77□□□□□ -0.05
DDX11-223ENST00000542838 NAPBQ9H115 298 aa14.77□□□□□ -0.05
DDX11-223ENST00000542838 ZCCHC17Q9NP64 241 aaKnown RBP14.77□□□□□ -0.05
DDX11-223ENST00000542838 PHKA1P46020 1223 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 MTF1Q14872 753 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 NR1I3Q14994 352 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 TOM1L2Q6ZVM7 507 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 TRIM22Q8IYM9 498 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 CCDC82Q8N4S0 544 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 TRIML1Q8N9V2 468 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 MED15Q96RN5 788 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 MRPL44Q9H9J2 332 aaKnown RBP14.76□□□□□ -0.05
DDX11-223ENST00000542838 PCDHB6Q9Y5E3 794 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 ANKRD18BA2A2Z9 1011 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 AKR1B15C9JRZ8 316 aaPredicted RBP14.76□□□□□ -0.05
DDX11-223ENST00000542838 IFNL3Q8IZI9 196 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 NEK11Q8NG66 645 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 TTLL11Q8NHH1 800 aa14.76□□□□□ -0.05
DDX11-223ENST00000542838 TCRBV5S4A2TA0A5A2 114 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 PATL2C9JE40 543 aaKnown RBP14.75□□□□□ -0.05
DDX11-223ENST00000542838 CCDC175P0C221 793 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 GPTP24298 496 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 PLCD1P51178 756 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 IRX2Q9BZI1 471 aaPredicted RBP14.75□□□□□ -0.05
DDX11-223ENST00000542838 EPB41L4AQ9HCS5 686 aaPredicted RBP14.75□□□□□ -0.05
DDX11-223ENST00000542838 TOMM22Q9NS69 142 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 CHD4Q14839 1912 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 SOWAHDA6NJG2 315 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 ST5P78524 1137 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 NR5A1Q13285 461 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 ALX1Q15699 326 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 RTN1Q16799 776 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 RRP12Q5JTH9 1297 aaKnown RBP14.75□□□□□ -0.05
DDX11-223ENST00000542838 KANK3Q6NY19 840 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 FOXP1Q9H334 677 aaPredicted RBP14.75□□□□□ -0.05
DDX11-223ENST00000542838 ZSWIM4Q9H7M6 989 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 LZTFL1Q9NQ48 299 aa14.75□□□□□ -0.05
DDX11-223ENST00000542838 ACTN4O43707 911 aaKnown RBP14.74□□□□□ -0.05
DDX11-223ENST00000542838 IRX5P78411 483 aaPredicted RBP14.74□□□□□ -0.05
DDX11-223ENST00000542838 ZKSCAN3Q9BRR0 538 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 TEX13AQ9BXU3 409 aaPredicted RBP14.74□□□□□ -0.05
DDX11-223ENST00000542838 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
DDX11-223ENST00000542838 TACC3Q9Y6A5 838 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 PAPPAQ13219 1627 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 TNS3Q68CZ2 1445 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 A0A1B0GTH6 734 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 TEX33O43247 280 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 TXLNAP40222 546 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 USP49Q70CQ1 688 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 CMTR1Q8N1G2 835 aaKnown RBP14.74□□□□□ -0.05
DDX11-223ENST00000542838 TXLNBQ8N3L3 684 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 VGLL2Q8N8G2 317 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 ZNF579Q8NAF0 562 aaKnown RBP14.74□□□□□ -0.05
DDX11-223ENST00000542838 CNNM2Q9H8M5 875 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 SEC31BQ9NQW1 1179 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 MBD4O95243 580 aa14.74□□□□□ -0.05
DDX11-223ENST00000542838 PDE8BO95263 885 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms