RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 K7ELQ4 463 aaPredicted RBP20.38■□□□□ 0.85
GTDC1-219ENST00000542155 LARGE1O95461 756 aa20.38■□□□□ 0.85
GTDC1-219ENST00000542155 SPDYE2Q495Y8 402 aa20.38■□□□□ 0.85
GTDC1-219ENST00000542155 GRIN3BO60391 1043 aa20.38■□□□□ 0.85
GTDC1-219ENST00000542155 RALYLQ86SE5 291 aaKnown RBP20.38■□□□□ 0.85
GTDC1-219ENST00000542155 GPRC5DQ9NZD1 345 aa20.38■□□□□ 0.85
GTDC1-219ENST00000542155 PRC1O43663 620 aa20.37■□□□□ 0.85
GTDC1-219ENST00000542155 HMGB1P09429 215 aaKnown RBP20.37■□□□□ 0.85
GTDC1-219ENST00000542155 SENP2Q9HC62 589 aa20.37■□□□□ 0.85
GTDC1-219ENST00000542155 TRDNQ13061 729 aa20.37■□□□□ 0.85
GTDC1-219ENST00000542155 BECN1Q14457 450 aa20.37■□□□□ 0.85
GTDC1-219ENST00000542155 TRPM4Q8TD43 1214 aa20.37■□□□□ 0.85
GTDC1-219ENST00000542155 TMX3Q96JJ7 454 aa20.37■□□□□ 0.85
GTDC1-219ENST00000542155 ZKSCAN3Q9BRR0 538 aa20.37■□□□□ 0.85
GTDC1-219ENST00000542155 TPCN1Q9ULQ1 816 aa20.37■□□□□ 0.85
GTDC1-219ENST00000542155 MCM5P33992 734 aa20.36■□□□□ 0.85
GTDC1-219ENST00000542155 CDAN1Q8IWY9 1227 aa20.36■□□□□ 0.85
GTDC1-219ENST00000542155 SIPA1L1O43166 1804 aa20.36■□□□□ 0.85
GTDC1-219ENST00000542155 CNTNAP1P78357 1384 aa20.36■□□□□ 0.85
GTDC1-219ENST00000542155 ROBO3Q96MS0 1386 aa20.36■□□□□ 0.85
GTDC1-219ENST00000542155 DTNBO60941 627 aa20.36■□□□□ 0.85
GTDC1-219ENST00000542155 FAM47AQ5JRC9 791 aa20.36■□□□□ 0.85
GTDC1-219ENST00000542155 ALDH8A1Q9H2A2 487 aaPredicted RBP20.36■□□□□ 0.85
GTDC1-219ENST00000542155 VEZTQ9HBM0 779 aa20.36■□□□□ 0.85
GTDC1-219ENST00000542155 BRF1Q92994 677 aa20.35■□□□□ 0.85
GTDC1-219ENST00000542155 HIRAP54198 1017 aaPredicted RBP20.35■□□□□ 0.85
GTDC1-219ENST00000542155 AGXT2Q9BYV1 514 aa20.35■□□□□ 0.85
GTDC1-219ENST00000542155 KRT23Q9C075 422 aa20.35■□□□□ 0.85
GTDC1-219ENST00000542155 RNF41Q9H4P4 317 aaPredicted RBP20.35■□□□□ 0.85
GTDC1-219ENST00000542155 FOXD4L1Q9NU39 408 aa20.35■□□□□ 0.85
GTDC1-219ENST00000542155 CDK8P49336 464 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 GABPAQ06546 454 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 CNNM2Q9H8M5 875 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 FAM196BA6NMK8 535 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 ORC4O43929 436 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 RANBP6O60518 1105 aaKnown RBP20.34■□□□□ 0.85
GTDC1-219ENST00000542155 ME3Q16798 604 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 KIF4BQ2VIQ3 1234 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 C16orf86Q6ZW13 317 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 IGDCC4Q8TDY8 1250 aa20.34■□□□□ 0.85
GTDC1-219ENST00000542155 H7C1D1 291 aa20.33■□□□□ 0.85
GTDC1-219ENST00000542155 NMT2O60551 498 aa20.33■□□□□ 0.85
GTDC1-219ENST00000542155 NPM3O75607 178 aaKnown RBP20.33■□□□□ 0.85
GTDC1-219ENST00000542155 APOBRQ0VD83 1088 aa20.33■□□□□ 0.85
GTDC1-219ENST00000542155 DNAJC18Q9H819 358 aa20.33■□□□□ 0.85
GTDC1-219ENST00000542155 LIMCH1Q9UPQ0 1083 aa20.33■□□□□ 0.85
GTDC1-219ENST00000542155 ST3GAL1Q11201 340 aa20.33■□□□□ 0.84
GTDC1-219ENST00000542155 AMOTL1Q8IY63 956 aa20.33■□□□□ 0.84
GTDC1-219ENST00000542155 TMEM39BQ9GZU3 492 aa20.33■□□□□ 0.84
GTDC1-219ENST00000542155 ENTPD3O75355 529 aa20.32■□□□□ 0.84
GTDC1-219ENST00000542155 ZSCAN29Q8IWY8 852 aaPredicted RBP20.32■□□□□ 0.84
GTDC1-219ENST00000542155 RASA1P20936 1047 aa20.32■□□□□ 0.84
GTDC1-219ENST00000542155 PDE4BQ07343 736 aa20.32■□□□□ 0.84
GTDC1-219ENST00000542155 TTC6Q86TZ1 520 aa20.32■□□□□ 0.84
GTDC1-219ENST00000542155 BRPF3Q9ULD4 1205 aa20.32■□□□□ 0.84
GTDC1-219ENST00000542155 SLC3A2P08195 630 aaKnown RBP20.31■□□□□ 0.84
GTDC1-219ENST00000542155 NECAB1Q8N987 351 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 ESR2Q92731 530 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 TMOD2Q9NZR1 351 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 HACL1Q9UJ83 578 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 MCM2P49736 904 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 MMP14P50281 582 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 FGD1P98174 961 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 FBXL16Q8N461 479 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 MKNK2Q9HBH9 465 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 SERPINB13Q9UIV8 391 aa20.31■□□□□ 0.84
GTDC1-219ENST00000542155 SH2B2O14492 632 aaPredicted RBP20.3■□□□□ 0.84
GTDC1-219ENST00000542155 MYO1BO43795 1136 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 LY9Q9HBG7 655 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 POLR2AP24928 1970 aaKnown RBP20.3■□□□□ 0.84
GTDC1-219ENST00000542155 PCP11498 1178 aaKnown RBP20.3■□□□□ 0.84
GTDC1-219ENST00000542155 TFAP4Q01664 338 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 STK3Q13188 491 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 FAM151AQ8WW52 585 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 WDR19Q8NEZ3 1342 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 ATRNL1Q5VV63 1379 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 IFIT3O14879 490 aaKnown RBP20.3■□□□□ 0.84
GTDC1-219ENST00000542155 SHMT1P34896 483 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 SHROOM1Q2M3G4 852 aaPredicted RBP20.3■□□□□ 0.84
GTDC1-219ENST00000542155 FKBP1CQ5VVH2 108 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 RAB11FIP4Q86YS3 637 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 DHX36Q9H2U1 1008 aaKnown RBP20.3■□□□□ 0.84
GTDC1-219ENST00000542155 IL17RBQ9NRM6 502 aa20.3■□□□□ 0.84
GTDC1-219ENST00000542155 PI4KBQ9UBF8 816 aa20.29■□□□□ 0.84
GTDC1-219ENST00000542155 DAXXQ9UER7 740 aaPredicted RBP20.29■□□□□ 0.84
GTDC1-219ENST00000542155 ANKRD1Q15327 319 aa20.29■□□□□ 0.84
GTDC1-219ENST00000542155 SEC23AQ15436 765 aa20.29■□□□□ 0.84
GTDC1-219ENST00000542155 TMEM67Q5HYA8 995 aa20.29■□□□□ 0.84
GTDC1-219ENST00000542155 CSRNP1Q96S65 589 aa20.29■□□□□ 0.84
GTDC1-219ENST00000542155 ANGEL1Q9UNK9 670 aaKnown RBP20.29■□□□□ 0.84
GTDC1-219ENST00000542155 GLTPD2A6NH11 291 aa20.28■□□□□ 0.84
GTDC1-219ENST00000542155 HLA-DOAP06340 250 aa20.28■□□□□ 0.84
GTDC1-219ENST00000542155 RASA3Q14644 834 aa20.28■□□□□ 0.84
GTDC1-219ENST00000542155 DPY19L2Q6NUT2 758 aa20.28■□□□□ 0.84
GTDC1-219ENST00000542155 ENAHQ8N8S7 591 aaPredicted RBP20.28■□□□□ 0.84
GTDC1-219ENST00000542155 TSPY2A6NKD2 308 aa20.28■□□□□ 0.84
GTDC1-219ENST00000542155 CUL4AQ13619 759 aa20.28■□□□□ 0.84
GTDC1-219ENST00000542155 ANGEL2Q5VTE6 544 aaKnown RBP20.28■□□□□ 0.84
GTDC1-219ENST00000542155 IL27Q8NEV9 243 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms