RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.184e-7■■□□□ 12
SCARB1-207ENST00000541661 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
SCARB1-207ENST00000541661 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.19■□□□□ 0.18
SCARB1-207ENST00000541661 PNMA3Q9UL41 463 aa16.19■□□□□ 0.18
SCARB1-207ENST00000541661 SRGAP3O43295 1099 aa16.18■□□□□ 0.18
SCARB1-207ENST00000541661 TFRCP02786 760 aaKnown RBP16.18■□□□□ 0.18
SCARB1-207ENST00000541661 GNAI3P08754 354 aa16.18■□□□□ 0.18
SCARB1-207ENST00000541661 GSTO1P78417 241 aa16.18■□□□□ 0.18
SCARB1-207ENST00000541661 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-207ENST00000541661 ANKRD13CQ8N6S4 541 aa16.18■□□□□ 0.18
SCARB1-207ENST00000541661 DEFB118Q96PH6 123 aa16.18■□□□□ 0.18
SCARB1-207ENST00000541661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.18■□□□□ 0.18
SCARB1-207ENST00000541661 A0A1W2PPC1 479 aa16.17■□□□□ 0.18
SCARB1-207ENST00000541661 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
SCARB1-207ENST00000541661 RARSP54136 660 aaKnown RBP16.17■□□□□ 0.18
SCARB1-207ENST00000541661 SPP2Q13103 211 aa16.17■□□□□ 0.18
SCARB1-207ENST00000541661 SH3D19Q5HYK7 790 aa16.17■□□□□ 0.18
SCARB1-207ENST00000541661 SPATA5Q8NB90 893 aa16.17■□□□□ 0.18
SCARB1-207ENST00000541661 ZNF280CQ8ND82 737 aa16.17■□□□□ 0.18
SCARB1-207ENST00000541661 ALPK3Q96L96 1907 aa16.16■□□□□ 0.18
SCARB1-207ENST00000541661 EVI5O60447 810 aa16.16■□□□□ 0.18
SCARB1-207ENST00000541661 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
SCARB1-207ENST00000541661 CAP2P40123 477 aa16.16■□□□□ 0.18
SCARB1-207ENST00000541661 PABPC4Q13310 644 aaKnown RBP eCLIP16.16■□□□□ 0.18
SCARB1-207ENST00000541661 NEUROD6Q96NK8 337 aa16.16■□□□□ 0.18
SCARB1-207ENST00000541661 GJD2Q9UKL4 321 aa16.16■□□□□ 0.18
SCARB1-207ENST00000541661 FAM196BA6NMK8 535 aa16.15■□□□□ 0.18
SCARB1-207ENST00000541661 USP17L5A8MUK1 530 aa16.15■□□□□ 0.18
SCARB1-207ENST00000541661 RRP1BQ14684 758 aaKnown RBP16.15■□□□□ 0.18
SCARB1-207ENST00000541661 TBC1D9Q6ZT07 1266 aa16.15■□□□□ 0.18
SCARB1-207ENST00000541661 HERC5Q9UII4 1024 aaKnown RBP16.15■□□□□ 0.18
SCARB1-207ENST00000541661 PLXNB2O15031 1838 aa16.15■□□□□ 0.18
SCARB1-207ENST00000541661 HMGCS2P54868 508 aa16.14■□□□□ 0.17
SCARB1-207ENST00000541661 GORABQ5T7V8 394 aa16.14■□□□□ 0.17
SCARB1-207ENST00000541661 PI16Q6UXB8 463 aa16.14■□□□□ 0.17
SCARB1-207ENST00000541661 ANKLE1Q8NAG6 615 aa16.14■□□□□ 0.17
SCARB1-207ENST00000541661 PAWRQ96IZ0 340 aaKnown RBP16.14■□□□□ 0.17
SCARB1-207ENST00000541661 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.172e-9■■■□□ 15.3
SCARB1-207ENST00000541661 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
SCARB1-207ENST00000541661 MORF4L1Q9UBU8 362 aa16.14■□□□□ 0.17
SCARB1-207ENST00000541661 SIPA1L1O43166 1804 aa16.14■□□□□ 0.17
SCARB1-207ENST00000541661 HMGCRP04035 888 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 MCAMP43121 646 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 NECAB2Q7Z6G3 386 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 WDR18Q9BV38 432 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 AS3MTQ9HBK9 375 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 RAI14Q9P0K7 980 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 PI4KBQ9UBF8 816 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 TAOK2Q9UL54 1235 aa16.13■□□□□ 0.17
SCARB1-207ENST00000541661 CDK5RAP2Q96SN8 1893 aa16.12■□□□□ 0.17
SCARB1-207ENST00000541661 UQCRFS1P1P0C7P4 283 aa16.12■□□□□ 0.17
SCARB1-207ENST00000541661 METTL16Q86W50 562 aaKnown RBP16.12■□□□□ 0.17
SCARB1-207ENST00000541661 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
SCARB1-207ENST00000541661 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
SCARB1-207ENST00000541661 FOCADQ5VW36 1801 aa16.12■□□□□ 0.17
SCARB1-207ENST00000541661 GNAI2P04899 355 aa16.11■□□□□ 0.17
SCARB1-207ENST00000541661 HOXA7P31268 230 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-207ENST00000541661 PPP4CP60510 307 aa16.11■□□□□ 0.17
SCARB1-207ENST00000541661 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCARB1-207ENST00000541661 SH3RF3Q8TEJ3 882 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-207ENST00000541661 HMX1Q9NP08 348 aaPredicted RBP16.11■□□□□ 0.17
SCARB1-207ENST00000541661 LRP2BPQ9P2M1 347 aa16.11■□□□□ 0.17
SCARB1-207ENST00000541661 STAP2Q9UGK3 403 aa16.11■□□□□ 0.17
SCARB1-207ENST00000541661 LAMA3Q16787 3333 aa16.11■□□□□ 0.17
SCARB1-207ENST00000541661 MAST2Q6P0Q8 1798 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 PNMA6EA0A0J9YXQ4 647 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
SCARB1-207ENST00000541661 IGSF3O75054 1194 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 BAG3O95817 575 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 ASNSP08243 561 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 BMP8BP34820 402 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 BACE1P56817 501 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 FOXP4Q8IVH2 680 aaPredicted RBP16.1■□□□□ 0.17
SCARB1-207ENST00000541661 DIS3LQ8TF46 1054 aaKnown RBP16.1■□□□□ 0.17
SCARB1-207ENST00000541661 GDF15Q99988 308 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 GPR108Q9NPR9 543 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 GINM1Q9NU53 330 aa16.1■□□□□ 0.17
SCARB1-207ENST00000541661 C19orf81C9J6K1 198 aa16.09■□□□□ 0.17
SCARB1-207ENST00000541661 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-207ENST00000541661 TRIM27P14373 513 aa16.09■□□□□ 0.17
SCARB1-207ENST00000541661 PLCG2P16885 1265 aa16.09■□□□□ 0.17
SCARB1-207ENST00000541661 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
SCARB1-207ENST00000541661 TRIM32Q13049 653 aa16.09■□□□□ 0.17
SCARB1-207ENST00000541661 P2RX7Q99572 595 aaKnown RBP16.09■□□□□ 0.17
SCARB1-207ENST00000541661 NOL10Q9BSC4 688 aaKnown RBP16.09■□□□□ 0.17
SCARB1-207ENST00000541661 NBPF3Q9H094 633 aa16.09■□□□□ 0.17
SCARB1-207ENST00000541661 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.17
SCARB1-207ENST00000541661 MYO5AQ9Y4I1 1855 aaKnown RBP16.08■□□□□ 0.17
SCARB1-207ENST00000541661 XRCC5P13010 732 aaKnown RBP16.08■□□□□ 0.16
SCARB1-207ENST00000541661 JAG1P78504 1218 aa16.08■□□□□ 0.16
SCARB1-207ENST00000541661 MTMR2Q13614 643 aa16.08■□□□□ 0.16
SCARB1-207ENST00000541661 MAP3K21Q5TCX8 1036 aa16.08■□□□□ 0.16
SCARB1-207ENST00000541661 NAA16Q6N069 864 aaPredicted RBP16.08■□□□□ 0.16
SCARB1-207ENST00000541661 ATF7IPQ6VMQ6 1270 aa16.08■□□□□ 0.16
SCARB1-207ENST00000541661 DNAJC18Q9H819 358 aa16.08■□□□□ 0.16
SCARB1-207ENST00000541661 AATFQ9NY61 560 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCARB1-207ENST00000541661 TMOD4Q9NZQ9 345 aa16.08■□□□□ 0.16
SCARB1-207ENST00000541661 OGDHLQ9ULD0 1010 aa16.08■□□□□ 0.16
SCARB1-207ENST00000541661 COL6A3P12111 3177 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms