RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 SSRP1Q08945 709 aaKnown RBP23.47■■□□□ 1.35
OTUB1-210ENST00000541478 SEC23AQ15436 765 aa23.47■■□□□ 1.35
OTUB1-210ENST00000541478 ZNF654Q8IZM8 581 aa23.47■■□□□ 1.35
OTUB1-210ENST00000541478 TRIM29Q14134 588 aa23.46■■□□□ 1.35
OTUB1-210ENST00000541478 TRIM22Q8IYM9 498 aa23.46■■□□□ 1.35
OTUB1-210ENST00000541478 FAM217BQ9NTX9 383 aaPredicted RBP23.46■■□□□ 1.35
OTUB1-210ENST00000541478 MCM9Q9NXL9 1143 aa23.46■■□□□ 1.35
OTUB1-210ENST00000541478 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.46■■□□□ 1.35
OTUB1-210ENST00000541478 SF3B2Q13435 895 aaKnown RBP23.45■■□□□ 1.34
OTUB1-210ENST00000541478 COA1Q9GZY4 146 aa23.45■■□□□ 1.34
OTUB1-210ENST00000541478 FMNL1O95466 1100 aaPredicted RBP23.45■■□□□ 1.34
OTUB1-210ENST00000541478 PLCG2P16885 1265 aa23.45■■□□□ 1.34
OTUB1-210ENST00000541478 MFSD14BQ5SR56 506 aa23.45■■□□□ 1.34
OTUB1-210ENST00000541478 IFIT1BQ5T764 474 aaKnown RBP23.45■■□□□ 1.34
OTUB1-210ENST00000541478 MPNDQ8N594 471 aa23.45■■□□□ 1.34
OTUB1-210ENST00000541478 BICD2Q8TD16 824 aa23.45■■□□□ 1.34
OTUB1-210ENST00000541478 PHKBQ93100 1093 aa23.45■■□□□ 1.34
OTUB1-210ENST00000541478 RBSNQ9H1K0 784 aa23.45■■□□□ 1.34
OTUB1-210ENST00000541478 RCOR1Q9UKL0 485 aa23.45■■□□□ 1.34
OTUB1-210ENST00000541478 FAM205AQ6ZU69 1335 aa23.44■■□□□ 1.34
OTUB1-210ENST00000541478 DIXDC1Q155Q3 683 aa23.44■■□□□ 1.34
OTUB1-210ENST00000541478 ENAHQ8N8S7 591 aaPredicted RBP23.44■■□□□ 1.34
OTUB1-210ENST00000541478 UPF1Q92900 1129 aaKnown RBP eCLIP23.44■■□□□ 1.349e-8■■■□□ 18.2
OTUB1-210ENST00000541478 CALM1P0DP23 149 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 CALM2P0DP24 149 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 CALM3P0DP25 149 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 CATIPQ7Z7H3 387 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 FANCBQ8NB91 859 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 SH3RF3Q8TEJ3 882 aaPredicted RBP23.43■■□□□ 1.34
OTUB1-210ENST00000541478 USP28Q96RU2 1077 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 SLC26A6Q9BXS9 759 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 RTFDC1Q9BY42 306 aaPredicted RBP23.43■■□□□ 1.34
OTUB1-210ENST00000541478 DDX19AQ9NUU7 478 aaKnown RBP23.43■■□□□ 1.34
OTUB1-210ENST00000541478 PRDM1O75626 825 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 OTUD7BQ6GQQ9 843 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 NUP133Q8WUM0 1156 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 ZC3H12CQ9C0D7 883 aaKnown RBP23.43■■□□□ 1.34
OTUB1-210ENST00000541478 MKRN1Q9UHC7 482 aaKnown RBP23.43■■□□□ 1.34
OTUB1-210ENST00000541478 SUGT1Q9Y2Z0 365 aa23.43■■□□□ 1.34
OTUB1-210ENST00000541478 MYH2Q9UKX2 1941 aa23.42■■□□□ 1.34
OTUB1-210ENST00000541478 SMIM22K7EJ46 135 aa23.42■■□□□ 1.34
OTUB1-210ENST00000541478 KIF23Q02241 960 aaPredicted RBP23.42■■□□□ 1.34
OTUB1-210ENST00000541478 CEBPZQ03701 1054 aaKnown RBP23.42■■□□□ 1.34
OTUB1-210ENST00000541478 GRIK5Q16478 980 aa23.42■■□□□ 1.34
OTUB1-210ENST00000541478 MSL1Q68DK7 614 aa23.42■■□□□ 1.34
OTUB1-210ENST00000541478 DPP8Q6V1X1 898 aaPredicted RBP23.42■■□□□ 1.34
OTUB1-210ENST00000541478 FAM163AQ96GL9 167 aaPredicted RBP23.42■■□□□ 1.34
OTUB1-210ENST00000541478 COL11A2P13942 1736 aaPredicted RBP23.42■■□□□ 1.34
OTUB1-210ENST00000541478 ROBO3Q96MS0 1386 aa23.41■■□□□ 1.34
OTUB1-210ENST00000541478 BAG6P46379 1132 aa23.41■■□□□ 1.34
OTUB1-210ENST00000541478 EN1Q05925 392 aaPredicted RBP23.41■■□□□ 1.34
OTUB1-210ENST00000541478 C12orf60Q5U649 245 aa23.41■■□□□ 1.34
OTUB1-210ENST00000541478 PGBD1Q96JS3 809 aa23.41■■□□□ 1.34
OTUB1-210ENST00000541478 NUP62CLQ9H1M0 184 aa23.41■■□□□ 1.34
OTUB1-210ENST00000541478 RBM28Q9NW13 759 aaKnown RBP23.41■■□□□ 1.34
OTUB1-210ENST00000541478 RTEL1Q9NZ71 1219 aa23.41■■□□□ 1.34
OTUB1-210ENST00000541478 DLEC1Q9Y238 1755 aa23.41■■□□□ 1.34
OTUB1-210ENST00000541478 GPR75-ASB3A0A0A6YYF3 556 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 DDAH1O94760 285 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 DEXIO95424 95 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 BTDP43251 543 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 CCDC173Q0VFZ6 552 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 GNL2Q13823 731 aaKnown RBP23.4■■□□□ 1.34
OTUB1-210ENST00000541478 MYSM1Q5VVJ2 828 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 KRT40Q6A162 431 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 CAMKK2Q96RR4 588 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 TSPY2A6NKD2 308 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 USP17L8P0C7I0 530 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 LIG1P18858 919 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 SLC15A2Q16348 729 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 NAV1Q8NEY1 1877 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 EYA3Q99504 573 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 POLR3EQ9NVU0 708 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 STK32BQ9NY57 414 aa23.4■■□□□ 1.34
OTUB1-210ENST00000541478 YEATS4O95619 227 aa23.39■■□□□ 1.33
OTUB1-210ENST00000541478 POLR3DP05423 398 aaPredicted RBP23.39■■□□□ 1.33
OTUB1-210ENST00000541478 CYP2D6P10635 497 aa23.39■■□□□ 1.33
OTUB1-210ENST00000541478 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.33
OTUB1-210ENST00000541478 KCNG4Q8TDN1 519 aa23.39■■□□□ 1.33
OTUB1-210ENST00000541478 TGFBRAP1Q8WUH2 860 aa23.39■■□□□ 1.33
OTUB1-210ENST00000541478 ZNF287Q9HBT7 754 aa23.39■■□□□ 1.33
OTUB1-210ENST00000541478 DACT1Q9NYF0 836 aa23.39■■□□□ 1.33
OTUB1-210ENST00000541478 GAKO14976 1311 aa23.39■■□□□ 1.33
OTUB1-210ENST00000541478 ECM29Q5VYK3 1845 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 RIMBP2O15034 1052 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 GTF2IP78347 998 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 CRACR2BQ8N4Y2 399 aaPredicted RBP23.38■■□□□ 1.33
OTUB1-210ENST00000541478 ZNF622Q969S3 477 aaKnown RBP eCLIP23.38■■□□□ 1.333e-7■□□□□ 11.3
OTUB1-210ENST00000541478 AIFM3Q96NN9 605 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 RNF26Q9BY78 433 aaPredicted RBP23.38■■□□□ 1.33
OTUB1-210ENST00000541478 GJB4Q9NTQ9 266 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 H0YIN7 160 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 AKAP17AQ02040 695 aaKnown RBP23.38■■□□□ 1.33
OTUB1-210ENST00000541478 EZH2Q15910 746 aaKnown RBP23.38■■□□□ 1.33
OTUB1-210ENST00000541478 MAP3K11Q16584 847 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 CCDC178Q5BJE1 867 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 STYK1Q6J9G0 422 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 C2CD5Q86YS7 1000 aa23.38■■□□□ 1.33
OTUB1-210ENST00000541478 FTOQ9C0B1 505 aaKnown RBP eCLIP23.38■■□□□ 1.33
OTUB1-210ENST00000541478 ME1P48163 572 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms