RNA–Protein interactions for RNA: ENST00000541335.1

KDM5A-208, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-208ENST00000541335 IGF2BP3O00425 579 aaKnown RBP eCLIP5.8□□□□□ -1.48
KDM5A-208ENST00000541335 GIPC1O14908 333 aa5.8□□□□□ -1.48
KDM5A-208ENST00000541335 FANCGO15287 622 aa5.8□□□□□ -1.48
KDM5A-208ENST00000541335 LRRC14Q15048 493 aa5.8□□□□□ -1.48
KDM5A-208ENST00000541335 ZBTB37Q5TC79 503 aa5.8□□□□□ -1.48
KDM5A-208ENST00000541335 ALG1LQ6GMV1 187 aa5.8□□□□□ -1.48
KDM5A-208ENST00000541335 ZSCAN29Q8IWY8 852 aaPredicted RBP5.8□□□□□ -1.48
KDM5A-208ENST00000541335 PICK1Q9NRD5 415 aa5.8□□□□□ -1.48
KDM5A-208ENST00000541335 GTF2IRD1Q9UHL9 959 aa5.8□□□□□ -1.48
KDM5A-208ENST00000541335 WWC3Q9ULE0 1092 aa5.8□□□□□ -1.48
KDM5A-208ENST00000541335 CELA3AP09093 270 aa5.79□□□□□ -1.48
KDM5A-208ENST00000541335 ZNF648Q5T619 568 aaPredicted RBP5.79□□□□□ -1.48
KDM5A-208ENST00000541335 SCARA3Q6AZY7 606 aa5.79□□□□□ -1.48
KDM5A-208ENST00000541335 SPACA3Q8IXA5 215 aa5.79□□□□□ -1.48
KDM5A-208ENST00000541335 FAM168AQ92567 244 aa5.79□□□□□ -1.48
KDM5A-208ENST00000541335 ASB16Q96NS5 453 aa5.79□□□□□ -1.48
KDM5A-208ENST00000541335 PCDHA4Q9UN74 947 aa5.79□□□□□ -1.48
KDM5A-208ENST00000541335 EOMESO95936 686 aa5.78□□□□□ -1.48
KDM5A-208ENST00000541335 NKPD1Q17RQ9 610 aa5.78□□□□□ -1.48
KDM5A-208ENST00000541335 SLC23A3Q6PIS1 610 aa5.78□□□□□ -1.48
KDM5A-208ENST00000541335 ARMCX6Q7L4S7 300 aa5.78□□□□□ -1.48
KDM5A-208ENST00000541335 CYP8B1Q9UNU6 501 aa5.78□□□□□ -1.48
KDM5A-208ENST00000541335 ATP2B2Q01814 1243 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 PTPN11Q06124 597 aaPredicted RBP5.77□□□□□ -1.49
KDM5A-208ENST00000541335 IKZF1Q13422 519 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 PCNX4Q63HM2 1172 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 CDC37L1Q7L3B6 337 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 KCT2Q8NC54 265 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 FLAD1Q8NFF5 587 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 ASB11Q8WXH4 323 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 ELMO3Q96BJ8 720 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 C12orf49Q9H741 205 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 PRDM7Q9NQW5 492 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 SPG7Q9UQ90 795 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 IVNS1ABPQ9Y6Y0 642 aa5.77□□□□□ -1.49
KDM5A-208ENST00000541335 GNAT3A8MTJ3 354 aa5.76□□□□□ -1.49
KDM5A-208ENST00000541335 LRIG2O94898 1065 aa5.76□□□□□ -1.49
KDM5A-208ENST00000541335 USP17L7P0C7H9 530 aa5.76□□□□□ -1.49
KDM5A-208ENST00000541335 INPP5AQ14642 412 aa5.76□□□□□ -1.49
KDM5A-208ENST00000541335 LRFN4Q6PJG9 635 aa5.76□□□□□ -1.49
KDM5A-208ENST00000541335 ZNF507Q8TCN5 953 aa5.76□□□□□ -1.49
KDM5A-208ENST00000541335 TMEM40Q8WWA1 233 aa5.76□□□□□ -1.49
KDM5A-208ENST00000541335 FAM8A1Q9UBU6 413 aa5.76□□□□□ -1.49
KDM5A-208ENST00000541335 PITPNM2Q9BZ72 1349 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 FARP2O94887 1054 aaPredicted RBP5.75□□□□□ -1.49
KDM5A-208ENST00000541335 SLITRK5O94991 958 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 P4HBP07237 508 aaKnown RBP5.75□□□□□ -1.49
KDM5A-208ENST00000541335 CLCN7P51798 805 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 ZP2Q05996 745 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 CYFIP1Q7L576 1253 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 GAL3ST3Q96A11 431 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 PLPPR2Q96GM1 343 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 FBRSQ9HAH7 460 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 PRDM5Q9NQX1 630 aaPredicted RBP5.75□□□□□ -1.49
KDM5A-208ENST00000541335 MAPK8IP1Q9UQF2 711 aa5.75□□□□□ -1.49
KDM5A-208ENST00000541335 PRAMEF27A3QJZ7 478 aa5.74□□□□□ -1.49
KDM5A-208ENST00000541335 KCNA1Q09470 495 aa5.74□□□□□ -1.49
KDM5A-208ENST00000541335 SLBPQ14493 270 aaKnown RBP eCLIP5.74□□□□□ -1.49
KDM5A-208ENST00000541335 ZNF124Q15973 351 aa5.74□□□□□ -1.49
KDM5A-208ENST00000541335 SV2BQ7L1I2 683 aa5.74□□□□□ -1.49
KDM5A-208ENST00000541335 FOXQ1Q9C009 403 aa5.74□□□□□ -1.49
KDM5A-208ENST00000541335 CNTNAP4Q9C0A0 1308 aa5.74□□□□□ -1.49
KDM5A-208ENST00000541335 CAP2P40123 477 aa5.73□□□□□ -1.49
KDM5A-208ENST00000541335 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
KDM5A-208ENST00000541335 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.73□□□□□ -1.49
KDM5A-208ENST00000541335 HDXQ7Z353 690 aa5.73□□□□□ -1.49
KDM5A-208ENST00000541335 ZSWIM9Q86XI8 627 aa5.73□□□□□ -1.49
KDM5A-208ENST00000541335 WNT10AQ9GZT5 417 aa5.73□□□□□ -1.49
KDM5A-208ENST00000541335 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.73□□□□□ -1.49
KDM5A-208ENST00000541335 TTF2Q9UNY4 1162 aaKnown RBP5.73□□□□□ -1.49
KDM5A-208ENST00000541335 CTNND2Q9UQB3 1225 aa5.73□□□□□ -1.49
KDM5A-208ENST00000541335 PRR33A8MZF0 331 aa5.72□□□□□ -1.49
KDM5A-208ENST00000541335 LDHBP07195 334 aaKnown RBP5.72□□□□□ -1.49
KDM5A-208ENST00000541335 CDK8P49336 464 aa5.72□□□□□ -1.49
KDM5A-208ENST00000541335 NKG7Q16617 165 aa5.72□□□□□ -1.49
KDM5A-208ENST00000541335 WIPI1Q5MNZ9 446 aaPredicted RBP5.72□□□□□ -1.49
KDM5A-208ENST00000541335 C22orf34Q6ZV56 151 aa5.72□□□□□ -1.49
KDM5A-208ENST00000541335 FRMD6Q96NE9 622 aa5.72□□□□□ -1.49
KDM5A-208ENST00000541335 MIPEPQ99797 713 aa5.72□□□□□ -1.49
KDM5A-208ENST00000541335 SEMA3GQ9NS98 782 aa5.72□□□□□ -1.49
KDM5A-208ENST00000541335 LMCD1Q9NZU5 365 aa5.72□□□□□ -1.49
KDM5A-208ENST00000541335 ZNF503-AS2A6NEH8 195 aa5.71□□□□□ -1.5
KDM5A-208ENST00000541335 FAM155AB1AL88 458 aaPredicted RBP5.71□□□□□ -1.5
KDM5A-208ENST00000541335 ZNF865P0CJ78 1059 aaPredicted RBP5.71□□□□□ -1.5
KDM5A-208ENST00000541335 MESP2Q0VG99 397 aa5.71□□□□□ -1.5
KDM5A-208ENST00000541335 SFRP5Q5T4F7 317 aa5.71□□□□□ -1.5
KDM5A-208ENST00000541335 TTBK2Q6IQ55 1244 aa5.71□□□□□ -1.5
KDM5A-208ENST00000541335 MFSD4AQ8N468 514 aa5.71□□□□□ -1.5
KDM5A-208ENST00000541335 HSPA12BQ96MM6 686 aa5.71□□□□□ -1.5
KDM5A-208ENST00000541335 CARS2Q9HA77 564 aaKnown RBP5.71□□□□□ -1.5
KDM5A-208ENST00000541335 ATP13A1Q9HD20 1204 aa5.71□□□□□ -1.5
KDM5A-208ENST00000541335 TPX2Q9ULW0 747 aaKnown RBP5.71□□□□□ -1.5
KDM5A-208ENST00000541335 SNCAIPQ9Y6H5 919 aa5.71□□□□□ -1.5
KDM5A-208ENST00000541335 LRRC10BA6NIK2 292 aa5.7□□□□□ -1.5
KDM5A-208ENST00000541335 DBX1A6NMT0 343 aa5.7□□□□□ -1.5
KDM5A-208ENST00000541335 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.7□□□□□ -1.5
KDM5A-208ENST00000541335 GNA15P30679 374 aa5.7□□□□□ -1.5
KDM5A-208ENST00000541335 ETF1P62495 437 aaKnown RBP5.7□□□□□ -1.5
KDM5A-208ENST00000541335 FGD1P98174 961 aa5.7□□□□□ -1.5
KDM5A-208ENST00000541335 KCNMB1Q16558 191 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms