RNA–Protein interactions for RNA: ENST00000541335.1

KDM5A-208, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-208ENST00000541335 AEBP2Q6ZN18 517 aaPredicted RBP21.6■■□□□ 1.05
KDM5A-208ENST00000541335 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
KDM5A-208ENST00000541335 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.53
KDM5A-208ENST00000541335 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
KDM5A-208ENST00000541335 FOXD1Q16676 465 aa17.13■□□□□ 0.33
KDM5A-208ENST00000541335 PLPPR3Q6T4P5 718 aa16.54■□□□□ 0.24
KDM5A-208ENST00000541335 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
KDM5A-208ENST00000541335 ADRA2BP18089 450 aa16.09■□□□□ 0.17
KDM5A-208ENST00000541335 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
KDM5A-208ENST00000541335 MSH5O43196 834 aa15.96■□□□□ 0.15
KDM5A-208ENST00000541335 POTEDQ86YR6 584 aa15.35■□□□□ 0.05
KDM5A-208ENST00000541335 MAPK8IP2Q13387 824 aaPredicted RBP14.73□□□□□ -0.05
KDM5A-208ENST00000541335 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
KDM5A-208ENST00000541335 DMRT2Q9Y5R5 561 aa14.61□□□□□ -0.07
KDM5A-208ENST00000541335 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
KDM5A-208ENST00000541335 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
KDM5A-208ENST00000541335 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
KDM5A-208ENST00000541335 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
KDM5A-208ENST00000541335 NCBP3Q53F19 620 aaKnown RBP14□□□□□ -0.17
KDM5A-208ENST00000541335 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
KDM5A-208ENST00000541335 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
KDM5A-208ENST00000541335 KCNA4P22459 653 aa13.68□□□□□ -0.22
KDM5A-208ENST00000541335 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
KDM5A-208ENST00000541335 CACNB1Q02641 598 aaPredicted RBP13.61□□□□□ -0.23
KDM5A-208ENST00000541335 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
KDM5A-208ENST00000541335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
KDM5A-208ENST00000541335 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
KDM5A-208ENST00000541335 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
KDM5A-208ENST00000541335 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
KDM5A-208ENST00000541335 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
KDM5A-208ENST00000541335 SLC4A1APQ9BWU0 796 aaKnown RBP12.94□□□□□ -0.34
KDM5A-208ENST00000541335 CAPN15O75808 1086 aa12.92□□□□□ -0.34
KDM5A-208ENST00000541335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
KDM5A-208ENST00000541335 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
KDM5A-208ENST00000541335 DSG3P32926 999 aa12.82□□□□□ -0.36
KDM5A-208ENST00000541335 APLP2Q06481 763 aa12.82□□□□□ -0.36
KDM5A-208ENST00000541335 SAMD1Q6SPF0 538 aaPredicted RBP12.79□□□□□ -0.36
KDM5A-208ENST00000541335 MYCNP04198 464 aaPredicted RBP12.77□□□□□ -0.37
KDM5A-208ENST00000541335 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
KDM5A-208ENST00000541335 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
KDM5A-208ENST00000541335 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
KDM5A-208ENST00000541335 ABCB7O75027 752 aa12.64□□□□□ -0.39
KDM5A-208ENST00000541335 ZBTB22O15209 634 aa12.6□□□□□ -0.39
KDM5A-208ENST00000541335 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
KDM5A-208ENST00000541335 POLA2Q14181 598 aa12.44□□□□□ -0.42
KDM5A-208ENST00000541335 ATXN8OSP0DMR3 200 aa12.31□□□□□ -0.44
KDM5A-208ENST00000541335 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
KDM5A-208ENST00000541335 ZBTB12Q9Y330 459 aaPredicted RBP12.2□□□□□ -0.46
KDM5A-208ENST00000541335 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
KDM5A-208ENST00000541335 POTEHQ6S545 545 aa12.05□□□□□ -0.48
KDM5A-208ENST00000541335 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
KDM5A-208ENST00000541335 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
KDM5A-208ENST00000541335 AKT1S1Q96B36 256 aa11.98□□□□□ -0.49
KDM5A-208ENST00000541335 FBLN2P98095 1184 aa11.96□□□□□ -0.49
KDM5A-208ENST00000541335 MKRN4PQ13434 485 aaPredicted RBP11.92□□□□□ -0.5
KDM5A-208ENST00000541335 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
KDM5A-208ENST00000541335 REM2Q8IYK8 340 aaPredicted RBP11.87□□□□□ -0.51
KDM5A-208ENST00000541335 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
KDM5A-208ENST00000541335 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
KDM5A-208ENST00000541335 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
KDM5A-208ENST00000541335 PITPNM1O00562 1244 aa11.74□□□□□ -0.53
KDM5A-208ENST00000541335 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
KDM5A-208ENST00000541335 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
KDM5A-208ENST00000541335 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
KDM5A-208ENST00000541335 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.555e-7■■■□□ 15.8
KDM5A-208ENST00000541335 SPDYE1Q8NFV5 336 aaPredicted RBP11.6□□□□□ -0.55
KDM5A-208ENST00000541335 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
KDM5A-208ENST00000541335 CLEC11AQ9Y240 323 aa11.55□□□□□ -0.56
KDM5A-208ENST00000541335 PRKAR2AP13861 404 aaKnown RBP11.43□□□□□ -0.58
KDM5A-208ENST00000541335 SPDYE4A6NLX3 237 aa11.4□□□□□ -0.58
KDM5A-208ENST00000541335 HAX1O00165 279 aa11.39□□□□□ -0.59
KDM5A-208ENST00000541335 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
KDM5A-208ENST00000541335 SP7Q8TDD2 431 aaPredicted RBP11.36□□□□□ -0.59
KDM5A-208ENST00000541335 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
KDM5A-208ENST00000541335 EVX2Q03828 476 aa11.29□□□□□ -0.6
KDM5A-208ENST00000541335 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
KDM5A-208ENST00000541335 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
KDM5A-208ENST00000541335 PROM2Q8N271 834 aa11.18□□□□□ -0.62
KDM5A-208ENST00000541335 FARP1Q9Y4F1 1045 aaPredicted RBP11.18□□□□□ -0.62
KDM5A-208ENST00000541335 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
KDM5A-208ENST00000541335 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
KDM5A-208ENST00000541335 GABBR2O75899 941 aa11.03□□□□□ -0.64
KDM5A-208ENST00000541335 MNX1P50219 401 aaPredicted RBP11□□□□□ -0.65
KDM5A-208ENST00000541335 FKBP8Q14318 412 aa10.98□□□□□ -0.65
KDM5A-208ENST00000541335 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
KDM5A-208ENST00000541335 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
KDM5A-208ENST00000541335 ZNF579Q8NAF0 562 aaKnown RBP10.93□□□□□ -0.66
KDM5A-208ENST00000541335 CLCN6P51797 869 aa10.89□□□□□ -0.67
KDM5A-208ENST00000541335 PAK3O75914 559 aaPredicted RBP10.87□□□□□ -0.67
KDM5A-208ENST00000541335 MIER1Q8N108 512 aa10.85□□□□□ -0.67
KDM5A-208ENST00000541335 PHF12Q96QT6 1004 aa10.82□□□□□ -0.68
KDM5A-208ENST00000541335 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
KDM5A-208ENST00000541335 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
KDM5A-208ENST00000541335 GALR2O43603 387 aaPredicted RBP10.78□□□□□ -0.68
KDM5A-208ENST00000541335 PLCD3Q8N3E9 789 aa10.78□□□□□ -0.68
KDM5A-208ENST00000541335 TSPYL2Q9H2G4 693 aaPredicted RBP10.76□□□□□ -0.69
KDM5A-208ENST00000541335 DCBLD2Q96PD2 775 aa10.74□□□□□ -0.69
KDM5A-208ENST00000541335 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
KDM5A-208ENST00000541335 CCDC61Q9Y6R9 512 aa10.71□□□□□ -0.69
KDM5A-208ENST00000541335 FBXO3Q9UK99 471 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms