RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MGAMO43451 1857 aa15.38■□□□□ 0.05
COPS7A-211ENST00000540408 USP17L5A8MUK1 530 aa15.38■□□□□ 0.05
COPS7A-211ENST00000540408 ZBTB7BO15156 539 aaPredicted RBP15.38■□□□□ 0.05
COPS7A-211ENST00000540408 IPO8O15397 1037 aaKnown RBP15.38■□□□□ 0.05
COPS7A-211ENST00000540408 SLURP2P0DP57 97 aa15.38■□□□□ 0.05
COPS7A-211ENST00000540408 G3BP1Q13283 466 aaKnown RBP eCLIP15.38■□□□□ 0.05
COPS7A-211ENST00000540408 MTX1Q13505 466 aa15.38■□□□□ 0.05
COPS7A-211ENST00000540408 TREML2Q5T2D2 321 aa15.38■□□□□ 0.05
COPS7A-211ENST00000540408 CCDC84Q86UT8 332 aaPredicted RBP15.38■□□□□ 0.05
COPS7A-211ENST00000540408 NSUN4Q96CB9 384 aaKnown RBP15.38■□□□□ 0.05
COPS7A-211ENST00000540408 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
COPS7A-211ENST00000540408 HERC5Q9UII4 1024 aaKnown RBP15.38■□□□□ 0.05
COPS7A-211ENST00000540408 A0A1W2PPC1 479 aa15.37■□□□□ 0.05
COPS7A-211ENST00000540408 BAG3O95817 575 aa15.37■□□□□ 0.05
COPS7A-211ENST00000540408 UQCRFS1P1P0C7P4 283 aa15.37■□□□□ 0.05
COPS7A-211ENST00000540408 CAP2P40123 477 aa15.37■□□□□ 0.05
COPS7A-211ENST00000540408 RARSP54136 660 aaKnown RBP15.37■□□□□ 0.05
COPS7A-211ENST00000540408 TBC1D9Q6ZT07 1266 aa15.37■□□□□ 0.05
COPS7A-211ENST00000540408 NECAB2Q7Z6G3 386 aa15.37■□□□□ 0.05
COPS7A-211ENST00000540408 TEX11Q8IYF3 940 aa15.37■□□□□ 0.05
COPS7A-211ENST00000540408 PAK6Q9NQU5 681 aaPredicted RBP15.37■□□□□ 0.05
COPS7A-211ENST00000540408 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.37■□□□□ 0.05
COPS7A-211ENST00000540408 DOCK1Q14185 1865 aa15.36■□□□□ 0.05
COPS7A-211ENST00000540408 FAM196BA6NMK8 535 aa15.36■□□□□ 0.05
COPS7A-211ENST00000540408 GNAI2P04899 355 aa15.36■□□□□ 0.05
COPS7A-211ENST00000540408 ARID4AP29374 1257 aaPredicted RBP15.36■□□□□ 0.05
COPS7A-211ENST00000540408 HMGCS2P54868 508 aa15.36■□□□□ 0.05
COPS7A-211ENST00000540408 PAWRQ96IZ0 340 aaKnown RBP15.36■□□□□ 0.05
COPS7A-211ENST00000540408 TRIM34Q9BYJ4 488 aa15.36■□□□□ 0.05
COPS7A-211ENST00000540408 DHX36Q9H2U1 1008 aaKnown RBP15.36■□□□□ 0.05
COPS7A-211ENST00000540408 PI4KBQ9UBF8 816 aa15.36■□□□□ 0.05
COPS7A-211ENST00000540408 HMGCRP04035 888 aa15.35■□□□□ 0.05
COPS7A-211ENST00000540408 PLCG2P16885 1265 aa15.35■□□□□ 0.05
COPS7A-211ENST00000540408 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
COPS7A-211ENST00000540408 ANKLE1Q8NAG6 615 aa15.35■□□□□ 0.05
COPS7A-211ENST00000540408 ZNF384Q8TF68 577 aa15.35■□□□□ 0.05
COPS7A-211ENST00000540408 CRISPLD2Q9H0B8 497 aa15.35■□□□□ 0.05
COPS7A-211ENST00000540408 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.35■□□□□ 0.05
COPS7A-211ENST00000540408 ASCC2Q9H1I8 757 aaPredicted RBP15.35■□□□□ 0.05
COPS7A-211ENST00000540408 HMX1Q9NP08 348 aaPredicted RBP15.35■□□□□ 0.05
COPS7A-211ENST00000540408 TMOD4Q9NZQ9 345 aa15.35■□□□□ 0.05
COPS7A-211ENST00000540408 COL2A1P02458 1487 aaPredicted RBP15.34■□□□□ 0.05
COPS7A-211ENST00000540408 CEP290O15078 2479 aa15.34■□□□□ 0.05
COPS7A-211ENST00000540408 SH3D19Q5HYK7 790 aa15.34■□□□□ 0.05
COPS7A-211ENST00000540408 CCDC158Q5M9N0 1113 aa15.34■□□□□ 0.05
COPS7A-211ENST00000540408 NAA16Q6N069 864 aaPredicted RBP15.34■□□□□ 0.05
COPS7A-211ENST00000540408 PI16Q6UXB8 463 aa15.34■□□□□ 0.05
COPS7A-211ENST00000540408 PRO3102Q9H379 93 aa15.34■□□□□ 0.05
COPS7A-211ENST00000540408 RPTORQ8N122 1335 aa15.34■□□□□ 0.05
COPS7A-211ENST00000540408 ASNSP08243 561 aa15.33■□□□□ 0.04
COPS7A-211ENST00000540408 TTC39AQ5SRH9 613 aa15.33■□□□□ 0.04
COPS7A-211ENST00000540408 FOXP4Q8IVH2 680 aaPredicted RBP15.33■□□□□ 0.04
COPS7A-211ENST00000540408 CCAR1Q8IX12 1150 aaKnown RBP15.33■□□□□ 0.04
COPS7A-211ENST00000540408 CRACR2BQ8N4Y2 399 aaPredicted RBP15.33■□□□□ 0.04
COPS7A-211ENST00000540408 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
COPS7A-211ENST00000540408 WDR18Q9BV38 432 aa15.33■□□□□ 0.04
COPS7A-211ENST00000540408 TRIOBPQ9H2D6 2365 aa15.33■□□□□ 0.04
COPS7A-211ENST00000540408 PTPRFP10586 1907 aa15.33■□□□□ 0.04
COPS7A-211ENST00000540408 PHIPQ8WWQ0 1821 aa15.32■□□□□ 0.04
COPS7A-211ENST00000540408 C19orf81C9J6K1 198 aa15.32■□□□□ 0.04
COPS7A-211ENST00000540408 MCAMP43121 646 aa15.32■□□□□ 0.04
COPS7A-211ENST00000540408 BACE1P56817 501 aa15.32■□□□□ 0.04
COPS7A-211ENST00000540408 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
COPS7A-211ENST00000540408 NBPF3Q9H094 633 aa15.32■□□□□ 0.04
COPS7A-211ENST00000540408 GINM1Q9NU53 330 aa15.32■□□□□ 0.04
COPS7A-211ENST00000540408 AATFQ9NY61 560 aaKnown RBP eCLIP15.32■□□□□ 0.04
COPS7A-211ENST00000540408 STAP2Q9UGK3 403 aa15.32■□□□□ 0.04
COPS7A-211ENST00000540408 GJD2Q9UKL4 321 aa15.32■□□□□ 0.04
COPS7A-211ENST00000540408 IGSF3O75054 1194 aa15.31■□□□□ 0.04
COPS7A-211ENST00000540408 HOXA7P31268 230 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-211ENST00000540408 OS9Q13438 667 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-211ENST00000540408 MTMR2Q13614 643 aa15.31■□□□□ 0.04
COPS7A-211ENST00000540408 ATF7IPQ6VMQ6 1270 aa15.31■□□□□ 0.04
COPS7A-211ENST00000540408 TRMT44Q8IYL2 757 aaKnown RBP15.31■□□□□ 0.04
COPS7A-211ENST00000540408 GPRC5AQ8NFJ5 357 aa15.31■□□□□ 0.04
COPS7A-211ENST00000540408 TGFBRAP1Q8WUH2 860 aa15.31■□□□□ 0.04
COPS7A-211ENST00000540408 NUDT12Q9BQG2 462 aa15.31■□□□□ 0.04
COPS7A-211ENST00000540408 MORF4L1Q9UBU8 362 aa15.31■□□□□ 0.04
COPS7A-211ENST00000540408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.31■□□□□ 0.04
COPS7A-211ENST00000540408 PNMA6EA0A0J9YXQ4 647 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 USP17L10C9JJH3 530 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 HLA-DOAP06340 250 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 TRIM27P14373 513 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 PPP4CP60510 307 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 PDE3AQ14432 1141 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 RRP1BQ14684 758 aaKnown RBP15.3■□□□□ 0.04
COPS7A-211ENST00000540408 SOCS4Q8WXH5 440 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 C11orf49Q9H6J7 331 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 GPR108Q9NPR9 543 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 SNRKQ9NRH2 765 aa15.3■□□□□ 0.04
COPS7A-211ENST00000540408 CYP2B6P20813 491 aa15.29■□□□□ 0.04
COPS7A-211ENST00000540408 MAPK4P31152 587 aa15.29■□□□□ 0.04
COPS7A-211ENST00000540408 MAPKAPK5Q8IW41 473 aa15.29■□□□□ 0.04
COPS7A-211ENST00000540408 C7orf61Q8IZ16 206 aa15.29■□□□□ 0.04
COPS7A-211ENST00000540408 SLC17A8Q8NDX2 589 aa15.29■□□□□ 0.04
COPS7A-211ENST00000540408 DIS3LQ8TF46 1054 aaKnown RBP15.29■□□□□ 0.04
COPS7A-211ENST00000540408 GTF3C2Q8WUA4 911 aaPredicted RBP15.29■□□□□ 0.04
COPS7A-211ENST00000540408 CLUAP1Q96AJ1 413 aa15.29■□□□□ 0.04
COPS7A-211ENST00000540408 P2RX7Q99572 595 aaKnown RBP15.29■□□□□ 0.04
COPS7A-211ENST00000540408 CWC22Q9HCG8 908 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms