RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 CHRDL2Q6WN34 429 aa17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 ANKRD13CQ8N6S4 541 aa17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 SMCR8Q8TEV9 937 aaPredicted RBP17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 SNRKQ9NRH2 765 aa17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 AGTPBP1Q9UPW5 1226 aa17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 SLC45A1Q9Y2W3 748 aa17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 TBC1D12O60347 775 aa17.57■□□□□ 0.4
SEMA4D-222ENST00000540183 GNAI2P04899 355 aa17.57■□□□□ 0.4
SEMA4D-222ENST00000540183 UBXN2AP68543 259 aa17.57■□□□□ 0.4
SEMA4D-222ENST00000540183 SLAIN1Q8ND83 568 aa17.57■□□□□ 0.4
SEMA4D-222ENST00000540183 SH3RF3Q8TEJ3 882 aaPredicted RBP17.57■□□□□ 0.4
SEMA4D-222ENST00000540183 OSBPL5Q9H0X9 879 aaPredicted RBP17.57■□□□□ 0.4
SEMA4D-222ENST00000540183 TAOK2Q9UL54 1235 aa17.57■□□□□ 0.4
SEMA4D-222ENST00000540183 COL2A1P02458 1487 aaPredicted RBP17.56■□□□□ 0.4
SEMA4D-222ENST00000540183 TNPO2O14787 897 aaKnown RBP17.56■□□□□ 0.4
SEMA4D-222ENST00000540183 INHAP05111 366 aa17.56■□□□□ 0.4
SEMA4D-222ENST00000540183 SPP2Q13103 211 aa17.56■□□□□ 0.4
SEMA4D-222ENST00000540183 G3BP1Q13283 466 aaKnown RBP eCLIP17.56■□□□□ 0.4
SEMA4D-222ENST00000540183 ATF7IPQ6VMQ6 1270 aa17.56■□□□□ 0.4
SEMA4D-222ENST00000540183 TEX11Q8IYF3 940 aa17.56■□□□□ 0.4
SEMA4D-222ENST00000540183 U2AF1L4Q8WU68 220 aaKnown RBP17.56■□□□□ 0.4
SEMA4D-222ENST00000540183 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
SEMA4D-222ENST00000540183 LDHCP07864 332 aa17.55■□□□□ 0.4
SEMA4D-222ENST00000540183 HMGCS2P54868 508 aa17.55■□□□□ 0.4
SEMA4D-222ENST00000540183 GSTO1P78417 241 aa17.55■□□□□ 0.4
SEMA4D-222ENST00000540183 JAG1P78504 1218 aa17.55■□□□□ 0.4
SEMA4D-222ENST00000540183 SHROOM1Q2M3G4 852 aaPredicted RBP17.55■□□□□ 0.4
SEMA4D-222ENST00000540183 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
SEMA4D-222ENST00000540183 NKX2-3Q8TAU0 364 aa17.55■□□□□ 0.4
SEMA4D-222ENST00000540183 CCER2I3L3R5 266 aa17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 PEX10O60683 326 aa17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 FARP2O94887 1054 aaPredicted RBP17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 CAP2P40123 477 aa17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 ADGRA1Q86SQ6 560 aa17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 DBNDD2Q9BQY9 259 aa17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
SEMA4D-222ENST00000540183 SGPL1O95470 568 aa17.53■□□□□ 0.4
SEMA4D-222ENST00000540183 UQCRFS1P1P0C7P4 283 aa17.53■□□□□ 0.4
SEMA4D-222ENST00000540183 PROCA1Q8NCQ7 364 aaPredicted RBP17.53■□□□□ 0.4
SEMA4D-222ENST00000540183 ZNF280CQ8ND82 737 aa17.53■□□□□ 0.4
SEMA4D-222ENST00000540183 DEFB118Q96PH6 123 aa17.53■□□□□ 0.4
SEMA4D-222ENST00000540183 DDX60LQ5H9U9 1706 aaKnown RBP17.52■□□□□ 0.4
SEMA4D-222ENST00000540183 IPO8O15397 1037 aaKnown RBP17.52■□□□□ 0.4
SEMA4D-222ENST00000540183 IRF5Q13568 498 aa17.52■□□□□ 0.4
SEMA4D-222ENST00000540183 MAPKAPK5Q8IW41 473 aa17.52■□□□□ 0.4
SEMA4D-222ENST00000540183 PXYLP1Q8TE99 480 aa17.52■□□□□ 0.4
SEMA4D-222ENST00000540183 DNAJC18Q9H819 358 aa17.52■□□□□ 0.4
SEMA4D-222ENST00000540183 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 TRIM32Q13049 653 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 POLA2Q14181 598 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 FAM110CQ1W6H9 321 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 TNNI3KQ59H18 835 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 TTC39AQ5SRH9 613 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 COA7Q96BR5 231 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 HTATIP2Q9BUP3 242 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 ASCC2Q9H1I8 757 aaPredicted RBP17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 PIH1D3Q9NQM4 214 aaKnown RBP17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 PNMA3Q9UL41 463 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 FPGT-TNNI3KV9GXZ4 949 aa17.51■□□□□ 0.39
SEMA4D-222ENST00000540183 USP17L5A8MUK1 530 aa17.5■□□□□ 0.39
SEMA4D-222ENST00000540183 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
SEMA4D-222ENST00000540183 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
SEMA4D-222ENST00000540183 DIS3LQ8TF46 1054 aaKnown RBP17.5■□□□□ 0.39
SEMA4D-222ENST00000540183 TGFBRAP1Q8WUH2 860 aa17.5■□□□□ 0.39
SEMA4D-222ENST00000540183 PAK6Q9NQU5 681 aaPredicted RBP17.5■□□□□ 0.39
SEMA4D-222ENST00000540183 TLR7Q9NYK1 1049 aaKnown RBP17.5■□□□□ 0.39
SEMA4D-222ENST00000540183 FLT1P17948 1338 aa17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 GDF11O95390 407 aa17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 ZAP70P43403 619 aa17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 OS9Q13438 667 aaPredicted RBP17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 MTMR2Q13614 643 aa17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 SH3D19Q5HYK7 790 aa17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 NOL10Q9BSC4 688 aaKnown RBP17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 PRO3102Q9H379 93 aa17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 SAP30BPQ9UHR5 308 aaKnown RBP17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 HERC5Q9UII4 1024 aaKnown RBP17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 PALD1Q9ULE6 856 aa17.49■□□□□ 0.39
SEMA4D-222ENST00000540183 ATP8B2P98198 1209 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 ZKSCAN2Q63HK3 967 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 CRISPLD2Q9H0B8 497 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 GPR108Q9NPR9 543 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 GJD2Q9UKL4 321 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 NDUFB9Q9Y6M9 179 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 FRMPD3Q5JV73 1810 aa17.48■□□□□ 0.39
SEMA4D-222ENST00000540183 SURF6O75683 361 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 RLBP1P12271 317 aa17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 GCLCP48506 637 aaPredicted RBP17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 PPP4CP60510 307 aa17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 CCDC158Q5M9N0 1113 aa17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 PAWRQ96IZ0 340 aaKnown RBP17.47■□□□□ 0.39
SEMA4D-222ENST00000540183 P2RX7Q99572 595 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms