RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 IFIT1P09914 478 aaKnown RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 CCAR1Q8IX12 1150 aaKnown RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 GPR161Q8N6U8 529 aaKnown RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 CEP83Q9Y592 693 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 CCDC172P0C7W6 258 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 DNAJC21Q5F1R6 531 aaKnown RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 RUFY3Q7L099 469 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 KRT26Q7Z3Y9 468 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 GPC2Q8N158 579 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 ZNF396Q96N95 335 aaPredicted RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 FUCA2Q9BTY2 467 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 IFNKQ9P0W0 207 aa9.93□□□□□ -0.82
DDB1-217ENST00000540166 CNOT7Q9UIV1 285 aaKnown RBP9.93□□□□□ -0.82
DDB1-217ENST00000540166 CELF2O95319 508 aaKnown RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 PPP2R3AQ06190 1150 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 HDXQ7Z353 690 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 ERC1Q8IUD2 1116 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 PPP1R13BQ96KQ4 1090 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 POTEB2H3BUK9 544 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 HIP1O00291 1037 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 NR1I2O75469 434 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 H2AFXP16104 143 aaPredicted RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 CWF19L2Q2TBE0 894 aaKnown RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 ZSCAN29Q8IWY8 852 aaPredicted RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 LINS1Q8NG48 757 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 NEUROD6Q96NK8 337 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 IMPACTQ9P2X3 320 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 STAP2Q9UGK3 403 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 RBM8AQ9Y5S9 174 aaKnown RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 GOLGA6L9A6NEM1 432 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 EIF3CLB5ME19 914 aaKnown RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 TOP1P11387 765 aaKnown RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 IBSPP21815 317 aaPredicted RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 OLFM4Q6UX06 510 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 CCDC12Q8WUD4 166 aaPredicted RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 LEO1Q8WVC0 666 aaPredicted RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 EIF3CQ99613 913 aaKnown RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
DDB1-217ENST00000540166 PA2G4Q9UQ80 394 aaKnown RBP9.92□□□□□ -0.82
DDB1-217ENST00000540166 SHTN1A0MZ66 631 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 TMEM88BA6NKF7 163 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 ANKRD65E5RJM6 399 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 NBPF7P0C2Y1 421 aaPredicted RBP9.91□□□□□ -0.82
DDB1-217ENST00000540166 GMPSP49915 693 aaPredicted RBP9.91□□□□□ -0.82
DDB1-217ENST00000540166 DLGAP5Q15398 846 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 MCTP2Q6DN12 878 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 GBP6Q6ZN66 633 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 CDC37L1Q7L3B6 337 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 ZNF34Q8IZ26 560 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 FSIP1Q8NA03 581 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 ZNF446Q9NWS9 450 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 PCCAP05165 728 aaPredicted RBP9.91□□□□□ -0.82
DDB1-217ENST00000540166 NYAP1Q6ZVC0 841 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 HELBQ8NG08 1087 aaPredicted RBP9.91□□□□□ -0.82
DDB1-217ENST00000540166 ADARB2Q9NS39 739 aaKnown RBP9.91□□□□□ -0.82
DDB1-217ENST00000540166 CICQ96RK0 1608 aaPredicted RBP9.91□□□□□ -0.82
DDB1-217ENST00000540166 XDHP47989 1333 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 RGL2O15211 777 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 ATP2B1P20020 1258 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 CENPHQ9H3R5 247 aa9.91□□□□□ -0.82
DDB1-217ENST00000540166 BIN1O00499 593 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 ERLIN2O94905 339 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 CDR1P51861 262 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 HUNKP57058 714 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 VPS53Q5VIR6 699 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 LMBR1LQ6UX01 489 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 EVI5LQ96CN4 794 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 LCMT1Q9UIC8 334 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 NFKBIEO00221 500 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 EBAG9O00559 213 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 NOP2P46087 812 aaKnown RBP9.9□□□□□ -0.82
DDB1-217ENST00000540166 HTRA3P83110 453 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 STK38Q15208 465 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 KIF4BQ2VIQ3 1234 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 MICALL2Q8IY33 904 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 SSH3Q8TE77 659 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 ITGA6P23229 1130 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 TNNI2P48788 182 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 PTH1RQ03431 593 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 MMS22LQ6ZRQ5 1243 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 TAF1DQ9H5J8 278 aaPredicted RBP9.9□□□□□ -0.82
DDB1-217ENST00000540166 CXorf56Q9H5V9 222 aa9.9□□□□□ -0.82
DDB1-217ENST00000540166 C4BP0C0L5 1744 aa9.9□□□□□ -0.83
DDB1-217ENST00000540166 TNS1Q9HBL0 1735 aaKnown RBP9.9□□□□□ -0.83
DDB1-217ENST00000540166 PPP1R12BO60237 982 aaPredicted RBP9.89□□□□□ -0.83
DDB1-217ENST00000540166 LARGE1O95461 756 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 GTF2IP78347 998 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 ADCK5Q3MIX3 580 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 EFCAB13Q8IY85 973 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 PSMD1Q99460 953 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 CRACR2AQ9BSW2 395 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 PDE11AQ9HCR9 933 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 ECE2O60344 883 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 PPFIA3O75145 1194 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 USP17L8P0C7I0 530 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 CTSWP56202 376 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 CC2D1AQ6P1N0 951 aaPredicted RBP9.89□□□□□ -0.83
DDB1-217ENST00000540166 RUFY1Q96T51 708 aa9.89□□□□□ -0.83
DDB1-217ENST00000540166 IL25Q9H293 177 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms