RNA–Protein interactions for RNA: ENST00000540029.5

EPB42-203, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 2 BASIC

Gene EPB42, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-203ENST00000540029 RRP12Q5JTH9 1297 aaKnown RBP16.36■□□□□ 0.21
EPB42-203ENST00000540029 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 CERS3Q8IU89 383 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 SLC44A5Q8NCS7 719 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 FAM198AQ9UFP1 575 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 PRC1O43663 620 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 KDM4AO75164 1064 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 TNIP1Q15025 636 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 SENP2Q9HC62 589 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 ZSWIM5Q9P217 1185 aa16.36■□□□□ 0.21
EPB42-203ENST00000540029 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
EPB42-203ENST00000540029 HMGB1P09429 215 aaKnown RBP16.35■□□□□ 0.21
EPB42-203ENST00000540029 FGRP09769 529 aa16.35■□□□□ 0.21
EPB42-203ENST00000540029 ME3Q16798 604 aa16.35■□□□□ 0.21
EPB42-203ENST00000540029 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
EPB42-203ENST00000540029 BRF1Q92994 677 aa16.35■□□□□ 0.21
EPB42-203ENST00000540029 AGXT2Q9BYV1 514 aa16.35■□□□□ 0.21
EPB42-203ENST00000540029 ALDH8A1Q9H2A2 487 aaPredicted RBP16.35■□□□□ 0.21
EPB42-203ENST00000540029 CLRN2A0PK11 232 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
EPB42-203ENST00000540029 TCP10Q12799 353 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 NBPF9Q3BBW0 867 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 OGFOD1Q8N543 542 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 TOMM22Q9NS69 142 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 POLR3DP05423 398 aaPredicted RBP16.34■□□□□ 0.21
EPB42-203ENST00000540029 MCM5P33992 734 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 NUCB2P80303 420 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 TRDNQ13061 729 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 SH3BP5LQ7L8J4 393 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 ZBED3Q96IU2 234 aaPredicted RBP16.34■□□□□ 0.21
EPB42-203ENST00000540029 ZKSCAN3Q9BRR0 538 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 OSBPL5Q9H0X9 879 aaPredicted RBP16.34■□□□□ 0.21
EPB42-203ENST00000540029 RNF181Q9P0P0 153 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 SCAF8Q9UPN6 1271 aaKnown RBP16.34■□□□□ 0.21
EPB42-203ENST00000540029 LIMCH1Q9UPQ0 1083 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 ROBO3Q96MS0 1386 aa16.34■□□□□ 0.21
EPB42-203ENST00000540029 CLCN1P35523 988 aa16.33■□□□□ 0.21
EPB42-203ENST00000540029 APOBRQ0VD83 1088 aa16.33■□□□□ 0.21
EPB42-203ENST00000540029 DLGAP5Q15398 846 aa16.33■□□□□ 0.21
EPB42-203ENST00000540029 MICALL2Q8IY33 904 aa16.33■□□□□ 0.21
EPB42-203ENST00000540029 NECAB1Q8N987 351 aa16.33■□□□□ 0.21
EPB42-203ENST00000540029 IDI2Q9BXS1 227 aa16.33■□□□□ 0.21
EPB42-203ENST00000540029 MYOZ2Q9NPC6 264 aa16.33■□□□□ 0.21
EPB42-203ENST00000540029 HDAC9Q9UKV0 1011 aa16.33■□□□□ 0.21
EPB42-203ENST00000540029 SIPA1L1O43166 1804 aa16.33■□□□□ 0.2
EPB42-203ENST00000540029 WNT10BO00744 389 aa16.33■□□□□ 0.2
EPB42-203ENST00000540029 MCM2P49736 904 aa16.33■□□□□ 0.2
EPB42-203ENST00000540029 ZNF280AP59817 542 aaPredicted RBP16.33■□□□□ 0.2
EPB42-203ENST00000540029 GPR162Q16538 588 aa16.33■□□□□ 0.2
EPB42-203ENST00000540029 KLHL40Q2TBA0 621 aa16.33■□□□□ 0.2
EPB42-203ENST00000540029 C9orf131Q5VYM1 1079 aa16.33■□□□□ 0.2
EPB42-203ENST00000540029 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.2
EPB42-203ENST00000540029 DDX49Q9Y6V7 483 aaKnown RBP16.33■□□□□ 0.2
EPB42-203ENST00000540029 ASTN2O75129 1339 aaPredicted RBP16.33■□□□□ 0.2
EPB42-203ENST00000540029 DDTLA6NHG4 134 aaPredicted RBP16.32■□□□□ 0.2
EPB42-203ENST00000540029 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
EPB42-203ENST00000540029 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
EPB42-203ENST00000540029 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
EPB42-203ENST00000540029 CNNM2Q9H8M5 875 aa16.32■□□□□ 0.2
EPB42-203ENST00000540029 NMT2O60551 498 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 RPS12P25398 132 aaKnown RBP16.31■□□□□ 0.2
EPB42-203ENST00000540029 CUL4AQ13619 759 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 MTMR14Q8NCE2 650 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 KRT23Q9C075 422 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
EPB42-203ENST00000540029 CWC22Q9HCG8 908 aaKnown RBP16.31■□□□□ 0.2
EPB42-203ENST00000540029 ZNF70Q9UC06 446 aaPredicted RBP16.31■□□□□ 0.2
EPB42-203ENST00000540029 CNOT7Q9UIV1 285 aaKnown RBP16.31■□□□□ 0.2
EPB42-203ENST00000540029 TCP10L2B9ZVM9 353 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 SH2B2O14492 632 aaPredicted RBP16.31■□□□□ 0.2
EPB42-203ENST00000540029 ORC4O43929 436 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
EPB42-203ENST00000540029 DDNO94850 711 aaPredicted RBP16.31■□□□□ 0.2
EPB42-203ENST00000540029 STK3Q13188 491 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 MCTP1Q6DN14 999 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 CDAN1Q8IWY9 1227 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 FBXL16Q8N461 479 aa16.31■□□□□ 0.2
EPB42-203ENST00000540029 FGD1P98174 961 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 GABPAQ06546 454 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 PKP1Q13835 747 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 TBC1D10BQ4KMP7 808 aaPredicted RBP16.3■□□□□ 0.2
EPB42-203ENST00000540029 C16orf86Q6ZW13 317 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 RAB11FIP4Q86YS3 637 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 DPF2Q92785 391 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 DNAJC18Q9H819 358 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 LY9Q9HBG7 655 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 CDK8P49336 464 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 CCDC83Q8IWF9 413 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 GPC2Q8N158 579 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 WDR19Q8NEZ3 1342 aa16.3■□□□□ 0.2
EPB42-203ENST00000540029 RASA1P20936 1047 aa16.29■□□□□ 0.2
EPB42-203ENST00000540029 ESR2Q92731 530 aa16.29■□□□□ 0.2
EPB42-203ENST00000540029 EPS15P42566 896 aa16.28■□□□□ 0.2
EPB42-203ENST00000540029 PDE4BQ07343 736 aa16.28■□□□□ 0.2
EPB42-203ENST00000540029 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms