RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 ADM5C9JUS6 153 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ADCK5Q3MIX3 580 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 AMOTL1Q8IY63 956 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 STK11IPQ8N1F8 1099 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 IL17RAQ96F46 866 aa22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 GLIS2Q9BZE0 524 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF1A-213ENST00000540022 DDX60LQ5H9U9 1706 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TNNI2P48788 182 aa22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 RASA3Q14644 834 aa22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TTC6Q86TZ1 520 aa22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 USP48Q86UV5 1035 aa22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ZSCAN29Q8IWY8 852 aaPredicted RBP22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 CDK5RAP2Q96SN8 1893 aa22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TMEM39BQ9GZU3 492 aa22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 DHX36Q9H2U1 1008 aaKnown RBP22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 INCENPQ9NQS7 918 aa22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 TSHZ2Q9NRE2 1034 aa22.46■■□□□ 1.19
TNFRSF1A-213ENST00000540022 ATRNL1Q5VV63 1379 aa22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 E7EWF7 191 aa22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 TNFAIP1Q13829 316 aa22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 PRAMEF18Q5VWM3 479 aa22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 DCPSQ96C86 337 aaKnown RBP22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 DYNLL2Q96FJ2 89 aa22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 FOCADQ5VW36 1801 aa22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 ECM29Q5VYK3 1845 aa22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 NAV1Q8NEY1 1877 aa22.45■■□□□ 1.18
TNFRSF1A-213ENST00000540022 AKNAD1Q5T1N1 836 aa22.44■■□□□ 1.18
TNFRSF1A-213ENST00000540022 CST9Q5W186 159 aa22.44■■□□□ 1.18
TNFRSF1A-213ENST00000540022 KRT26Q7Z3Y9 468 aa22.44■■□□□ 1.18
TNFRSF1A-213ENST00000540022 APOBEC3FQ8IUX4 373 aaKnown RBP22.44■■□□□ 1.18
TNFRSF1A-213ENST00000540022 CDAN1Q8IWY9 1227 aa22.44■■□□□ 1.18
TNFRSF1A-213ENST00000540022 COL2A1P02458 1487 aaPredicted RBP22.44■■□□□ 1.18
TNFRSF1A-213ENST00000540022 PITPNM2Q9BZ72 1349 aa22.44■■□□□ 1.18
TNFRSF1A-213ENST00000540022 ROBO3Q96MS0 1386 aa22.44■■□□□ 1.18
TNFRSF1A-213ENST00000540022 HLA-DOAP06340 250 aa22.43■■□□□ 1.18
TNFRSF1A-213ENST00000540022 COL9A3Q14050 684 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF1A-213ENST00000540022 CDC37L1Q7L3B6 337 aa22.43■■□□□ 1.18
TNFRSF1A-213ENST00000540022 STAG1Q8WVM7 1258 aa22.43■■□□□ 1.18
TNFRSF1A-213ENST00000540022 DEFB129Q9H1M3 183 aa22.43■■□□□ 1.18
TNFRSF1A-213ENST00000540022 BAZ2AQ9UIF9 1905 aaKnown RBP22.43■■□□□ 1.18
TNFRSF1A-213ENST00000540022 SLURP2P0DP57 97 aa22.42■■□□□ 1.18
TNFRSF1A-213ENST00000540022 GABPAQ06546 454 aa22.42■■□□□ 1.18
TNFRSF1A-213ENST00000540022 KRT32Q14532 448 aa22.42■■□□□ 1.18
TNFRSF1A-213ENST00000540022 JAKMIP1Q96N16 626 aaKnown RBP22.42■■□□□ 1.18
TNFRSF1A-213ENST00000540022 TEPSINQ96N21 525 aa22.42■■□□□ 1.18
TNFRSF1A-213ENST00000540022 CSRNP1Q96S65 589 aa22.42■■□□□ 1.18
TNFRSF1A-213ENST00000540022 PI4KBQ9UBF8 816 aa22.42■■□□□ 1.18
TNFRSF1A-213ENST00000540022 NEDD4P46934 1319 aa22.42■■□□□ 1.18
TNFRSF1A-213ENST00000540022 RASSF10A6NK89 507 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 FGRP09769 529 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 MFSD6Q6ZSS7 791 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 SLC44A5Q8NCS7 719 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 NKX2-3Q8TAU0 364 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 SLC3A2P08195 630 aaKnown RBP22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 C16orf86Q6ZW13 317 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 SULF1Q8IWU6 871 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 NEK1Q96PY6 1258 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 EHD4Q9H223 541 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 RNF41Q9H4P4 317 aaPredicted RBP22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 SERPINB13Q9UIV8 391 aa22.41■■□□□ 1.18
TNFRSF1A-213ENST00000540022 PRDM1O75626 825 aa22.4■■□□□ 1.18
TNFRSF1A-213ENST00000540022 CDK8P49336 464 aa22.4■■□□□ 1.18
TNFRSF1A-213ENST00000540022 ABT1Q9ULW3 272 aaKnown RBP22.4■■□□□ 1.18
TNFRSF1A-213ENST00000540022 CELF2O95319 508 aaKnown RBP22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 CPA1P15085 419 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 PSMA5P28066 241 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 VEGFBP49765 207 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 PDE4BQ07343 736 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 DEFB115Q30KQ5 88 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 FOXP4Q8IVH2 680 aaPredicted RBP22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 NCOA7Q8NI08 942 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 UPF3BQ9BZI7 483 aaKnown RBP22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 TM6SF1Q9BZW5 370 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 DNAJC18Q9H819 358 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 TOMM22Q9NS69 142 aa22.39■■□□□ 1.17
TNFRSF1A-213ENST00000540022 LAMA4Q16363 1823 aa22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 FAM196BA6NMK8 535 aa22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 B4E1Z4 1266 aa22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 CASTP20810 708 aaKnown RBP22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 TRDNQ13061 729 aa22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 RRP12Q5JTH9 1297 aaKnown RBP22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 METTL16Q86W50 562 aaKnown RBP22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 CRACR2BQ8N4Y2 399 aaPredicted RBP22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 ZSWIM6Q9HCJ5 1215 aa22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 PPP2R3BQ9Y5P8 575 aa22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 LAMB1P07942 1786 aa22.38■■□□□ 1.17
TNFRSF1A-213ENST00000540022 ORC4O43929 436 aa22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 PCP11498 1178 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 NBPF12Q5TAG4 269 aaPredicted RBP22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 RALYLQ86SE5 291 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 MB21D2Q8IYB1 491 aaPredicted RBP22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 CDCA5Q96FF9 252 aa22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 KRT23Q9C075 422 aa22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 CNNM2Q9H8M5 875 aa22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 TLL2Q9Y6L7 1015 aa22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 MYH1P12882 1939 aa22.37■■□□□ 1.17
TNFRSF1A-213ENST00000540022 RABEP1Q15276 862 aa22.36■■□□□ 1.17
TNFRSF1A-213ENST00000540022 BLOC1S2Q6QNY1 142 aa22.36■■□□□ 1.17
TNFRSF1A-213ENST00000540022 MKNK2Q9HBH9 465 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms