RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 GCLCP48506 637 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-219ENST00000539952 TCP10Q12799 353 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 GADL1Q6ZQY3 521 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.43□□□□□ -1.223e-8■■■□□ 15.8
CPSF7-219ENST00000539952 C11orf49Q9H6J7 331 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 GNL3LQ9NVN8 582 aaKnown RBP7.43□□□□□ -1.22
CPSF7-219ENST00000539952 PNMA3Q9UL41 463 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 ZMYND8Q9ULU4 1186 aaPredicted RBP7.43□□□□□ -1.22
CPSF7-219ENST00000539952 LRRFIP2Q9Y608 721 aaKnown RBP7.43□□□□□ -1.22
CPSF7-219ENST00000539952 KIF16BQ96L93 1317 aa7.43□□□□□ -1.22
CPSF7-219ENST00000539952 HMGCRP04035 888 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 MAGEA10P43363 369 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-219ENST00000539952 PABPC4Q13310 644 aaKnown RBP eCLIP7.42□□□□□ -1.22
CPSF7-219ENST00000539952 FAM110CQ1W6H9 321 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 ASTLQ6HA08 431 aaPredicted RBP7.42□□□□□ -1.22
CPSF7-219ENST00000539952 Q7L0L9 218 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 WDR63Q8IWG1 891 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
CPSF7-219ENST00000539952 ANKRD13CQ8N6S4 541 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 PDCD7Q8N8D1 485 aaKnown RBP7.42□□□□□ -1.22
CPSF7-219ENST00000539952 IDI2Q9BXS1 227 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 TBC1D2Q9BYX2 928 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 MRS2Q9HD23 443 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 FAM198AQ9UFP1 575 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 GJD2Q9UKL4 321 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 OGDHLQ9ULD0 1010 aa7.42□□□□□ -1.22
CPSF7-219ENST00000539952 BRCA2P51587 3418 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 SZT2Q5T011 3432 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 TBC1D12O60347 775 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 LDHBP07195 334 aaKnown RBP7.41□□□□□ -1.22
CPSF7-219ENST00000539952 FGFR2P21802 821 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 NFIAQ12857 509 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 PUM3Q15397 648 aaKnown RBP7.41□□□□□ -1.22
CPSF7-219ENST00000539952 RABL6Q3YEC7 729 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-219ENST00000539952 LRRC24Q50LG9 513 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 SLC4A10Q6U841 1118 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 ZSCAN29Q8IWY8 852 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-219ENST00000539952 SLF2Q8IX21 1173 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 TRMT44Q8IYL2 757 aaKnown RBP7.41□□□□□ -1.22
CPSF7-219ENST00000539952 VGLL2Q8N8G2 317 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 PROCA1Q8NCQ7 364 aaPredicted RBP7.41□□□□□ -1.22
CPSF7-219ENST00000539952 DIS3LQ8TF46 1054 aaKnown RBP7.41□□□□□ -1.22
CPSF7-219ENST00000539952 LPIN2Q92539 896 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 KAZALD1Q96I82 304 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 SUCLG2Q96I99 432 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 AGTPBP1Q9UPW5 1226 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 DAGLAQ9Y4D2 1042 aa7.41□□□□□ -1.22
CPSF7-219ENST00000539952 SEMA3EO15041 775 aa7.4□□□□□ -1.22
CPSF7-219ENST00000539952 NBPF7P0C2Y1 421 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-219ENST00000539952 XRCC5P13010 732 aaKnown RBP7.4□□□□□ -1.22
CPSF7-219ENST00000539952 SLC5A1P13866 664 aa7.4□□□□□ -1.22
CPSF7-219ENST00000539952 SYN1P17600 705 aa7.4□□□□□ -1.22
CPSF7-219ENST00000539952 IRX5P78411 483 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-219ENST00000539952 EXOSC9Q06265 439 aaKnown RBP7.4□□□□□ -1.22
CPSF7-219ENST00000539952 ZFPM1Q8IX07 1006 aa7.4□□□□□ -1.22
CPSF7-219ENST00000539952 ZGPATQ8N5A5 531 aaKnown RBP7.4□□□□□ -1.22
CPSF7-219ENST00000539952 KCNV2Q8TDN2 545 aa7.4□□□□□ -1.22
CPSF7-219ENST00000539952 SYMPKQ92797 1274 aaKnown RBP7.4□□□□□ -1.22
CPSF7-219ENST00000539952 FAM163AQ96GL9 167 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-219ENST00000539952 NUDT12Q9BQG2 462 aa7.4□□□□□ -1.22
CPSF7-219ENST00000539952 DENND2AQ9ULE3 1009 aa7.4□□□□□ -1.22
CPSF7-219ENST00000539952 UTYO14607 1347 aa7.4□□□□□ -1.22
CPSF7-219ENST00000539952 SPEF2Q9C093 1822 aa7.4□□□□□ -1.23
CPSF7-219ENST00000539952 SALL1Q9NSC2 1324 aa7.39□□□□□ -1.23
CPSF7-219ENST00000539952 TRIM75PA6NK02 468 aa7.39□□□□□ -1.23
CPSF7-219ENST00000539952 RGS3P49796 1198 aa7.39□□□□□ -1.23
CPSF7-219ENST00000539952 DIXDC1Q155Q3 683 aa7.39□□□□□ -1.23
CPSF7-219ENST00000539952 FAM9BQ8IZU0 186 aa7.39□□□□□ -1.23
CPSF7-219ENST00000539952 LBHD1Q9BQE6 289 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-219ENST00000539952 OSBPL5Q9H0X9 879 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-219ENST00000539952 BICC1Q9H694 974 aaKnown RBP7.39□□□□□ -1.23
CPSF7-219ENST00000539952 OTOFQ9HC10 1997 aa7.39□□□□□ -1.23
CPSF7-219ENST00000539952 RANBP2P49792 3224 aaKnown RBP7.38□□□□□ -1.23
CPSF7-219ENST00000539952 EYA2O00167 538 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 MAP4K4O95819 1239 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-219ENST00000539952 COL6A1P12109 1028 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 CYP2B6P20813 491 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 PRDX5P30044 214 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 ANP32AP39687 249 aaKnown RBP7.38□□□□□ -1.23
CPSF7-219ENST00000539952 SPP2Q13103 211 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 SH3D19Q5HYK7 790 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 MAP3K21Q5TCX8 1036 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 ZNF697Q5TEC3 545 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-219ENST00000539952 CCAR1Q8IX12 1150 aaKnown RBP7.38□□□□□ -1.23
CPSF7-219ENST00000539952 ZNF280CQ8ND82 737 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.38□□□□□ -1.238e-6■■□□□ 11.4
CPSF7-219ENST00000539952 AS3MTQ9HBK9 375 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 PRDM6Q9NQX0 595 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 CEP126Q9P2H0 1117 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 CACNA1FO60840 1977 aa7.38□□□□□ -1.23
CPSF7-219ENST00000539952 AK9Q5TCS8 1911 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 DDTLA6NHG4 134 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-219ENST00000539952 USP17L5A8MUK1 530 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 LDHCP07864 332 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 MAPK4P31152 587 aa7.37□□□□□ -1.23
CPSF7-219ENST00000539952 HOXA7P31268 230 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-219ENST00000539952 MDM2Q00987 491 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms