RNA–Protein interactions for RNA: ENST00000539702.1

DDX11-216, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-216ENST00000539702 NKX2-3Q8TAU0 364 aa16.64■□□□□ 0.25
DDX11-216ENST00000539702 SSH3Q8TE77 659 aa16.64■□□□□ 0.25
DDX11-216ENST00000539702 DBNDD2Q9BQY9 259 aa16.64■□□□□ 0.25
DDX11-216ENST00000539702 GABRQQ9UN88 632 aa16.64■□□□□ 0.25
DDX11-216ENST00000539702 AGTPBP1Q9UPW5 1226 aa16.64■□□□□ 0.25
DDX11-216ENST00000539702 FPGT-TNNI3KV9GXZ4 949 aa16.64■□□□□ 0.25
DDX11-216ENST00000539702 MYO5AQ9Y4I1 1855 aaKnown RBP16.64■□□□□ 0.25
DDX11-216ENST00000539702 SURF6O75683 361 aaKnown RBP16.63■□□□□ 0.25
DDX11-216ENST00000539702 BAG3O95817 575 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 SPP2Q13103 211 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 TREML2Q5T2D2 321 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 NAA16Q6N069 864 aaPredicted RBP16.63■□□□□ 0.25
DDX11-216ENST00000539702 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
DDX11-216ENST00000539702 SLAIN1Q8ND83 568 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 SHISA4Q96DD7 197 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 RNF208Q9H0X6 261 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 C1orf115Q9H7X2 142 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 AATFQ9NY61 560 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDX11-216ENST00000539702 MAST2Q6P0Q8 1798 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 CDK5RAP2Q96SN8 1893 aa16.63■□□□□ 0.25
DDX11-216ENST00000539702 TNPO2O14787 897 aaKnown RBP16.62■□□□□ 0.25
DDX11-216ENST00000539702 GJB1P08034 283 aa16.62■□□□□ 0.25
DDX11-216ENST00000539702 CAP2P40123 477 aa16.62■□□□□ 0.25
DDX11-216ENST00000539702 FLT3LGP49771 235 aa16.62■□□□□ 0.25
DDX11-216ENST00000539702 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX11-216ENST00000539702 ANKRD13CQ8N6S4 541 aa16.62■□□□□ 0.25
DDX11-216ENST00000539702 PROCA1Q8NCQ7 364 aaPredicted RBP16.62■□□□□ 0.25
DDX11-216ENST00000539702 ZNF280CQ8ND82 737 aa16.62■□□□□ 0.25
DDX11-216ENST00000539702 PI4KBQ9UBF8 816 aa16.62■□□□□ 0.25
DDX11-216ENST00000539702 HERC5Q9UII4 1024 aaKnown RBP16.62■□□□□ 0.25
DDX11-216ENST00000539702 PNMA3Q9UL41 463 aa16.62■□□□□ 0.25
DDX11-216ENST00000539702 LOC285556D6RIA3 1793 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 CEP290O15078 2479 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 ADCY3O60266 1144 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 CYP2E1P05181 493 aaPredicted RBP16.61■□□□□ 0.25
DDX11-216ENST00000539702 PLCG2P16885 1265 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 GJA8P48165 433 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 RRP1BQ14684 758 aaKnown RBP16.61■□□□□ 0.25
DDX11-216ENST00000539702 ITPRIPQ8IWB1 547 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 TGFBRAP1Q8WUH2 860 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 DHX36Q9H2U1 1008 aaKnown RBP16.61■□□□□ 0.25
DDX11-216ENST00000539702 SIPA1L1O43166 1804 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
DDX11-216ENST00000539702 USP17L5A8MUK1 530 aa16.6■□□□□ 0.25
DDX11-216ENST00000539702 H0YGN5 161 aa16.6■□□□□ 0.25
DDX11-216ENST00000539702 HMGCS2P54868 508 aa16.6■□□□□ 0.25
DDX11-216ENST00000539702 PPP4CP60510 307 aa16.6■□□□□ 0.25
DDX11-216ENST00000539702 MAPKAPK5Q8IW41 473 aa16.6■□□□□ 0.25
DDX11-216ENST00000539702 UNC93B1Q9H1C4 597 aa16.6■□□□□ 0.25
DDX11-216ENST00000539702 ELNP15502 786 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 ZAP70P43403 619 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 PABPC4Q13310 644 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDX11-216ENST00000539702 IRF5Q13568 498 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 ADGRA1Q86SQ6 560 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 PXYLP1Q8TE99 480 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 DPF3Q92784 378 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 COA7Q96BR5 231 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 ZNF512BQ96KM6 892 aaPredicted RBP16.59■□□□□ 0.25
DDX11-216ENST00000539702 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 TAOK2Q9UL54 1235 aa16.59■□□□□ 0.25
DDX11-216ENST00000539702 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
DDX11-216ENST00000539702 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
DDX11-216ENST00000539702 ZBTB7BO15156 539 aaPredicted RBP16.58■□□□□ 0.24
DDX11-216ENST00000539702 INHAP05111 366 aa16.58■□□□□ 0.24
DDX11-216ENST00000539702 RLBP1P12271 317 aa16.58■□□□□ 0.24
DDX11-216ENST00000539702 GCLCP48506 637 aaPredicted RBP16.58■□□□□ 0.24
DDX11-216ENST00000539702 FAM110CQ1W6H9 321 aa16.58■□□□□ 0.24
DDX11-216ENST00000539702 SH3D19Q5HYK7 790 aa16.58■□□□□ 0.24
DDX11-216ENST00000539702 U2AF1L4Q8WU68 220 aaKnown RBP16.58■□□□□ 0.24
DDX11-216ENST00000539702 TRIM34Q9BYJ4 488 aa16.58■□□□□ 0.24
DDX11-216ENST00000539702 CCDC8Q9H0W5 538 aaPredicted RBP16.58■□□□□ 0.24
DDX11-216ENST00000539702 PIH1D3Q9NQM4 214 aaKnown RBP16.58■□□□□ 0.24
DDX11-216ENST00000539702 DBNLQ9UJU6 430 aaKnown RBP16.58■□□□□ 0.24
DDX11-216ENST00000539702 FLT1P17948 1338 aa16.58■□□□□ 0.24
DDX11-216ENST00000539702 IGSF3O75054 1194 aa16.57■□□□□ 0.24
DDX11-216ENST00000539702 SGPL1O95470 568 aa16.57■□□□□ 0.24
DDX11-216ENST00000539702 ASNSP08243 561 aa16.57■□□□□ 0.24
DDX11-216ENST00000539702 UBE2Q1Q7Z7E8 422 aa16.57■□□□□ 0.24
DDX11-216ENST00000539702 FOXP4Q8IVH2 680 aaPredicted RBP16.57■□□□□ 0.24
DDX11-216ENST00000539702 CRACR2BQ8N4Y2 399 aaPredicted RBP16.57■□□□□ 0.24
DDX11-216ENST00000539702 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
DDX11-216ENST00000539702 ASCC2Q9H1I8 757 aaPredicted RBP16.57■□□□□ 0.24
DDX11-216ENST00000539702 TLR7Q9NYK1 1049 aaKnown RBP16.57■□□□□ 0.24
DDX11-216ENST00000539702 PALD1Q9ULE6 856 aa16.57■□□□□ 0.24
DDX11-216ENST00000539702 DYNLL1P63167 89 aaKnown RBP16.56■□□□□ 0.24
DDX11-216ENST00000539702 MTMR2Q13614 643 aa16.56■□□□□ 0.24
DDX11-216ENST00000539702 MIER1Q8N108 512 aa16.56■□□□□ 0.24
DDX11-216ENST00000539702 EAF2Q96CJ1 260 aaPredicted RBP16.56■□□□□ 0.24
DDX11-216ENST00000539702 HTATIP2Q9BUP3 242 aa16.56■□□□□ 0.24
DDX11-216ENST00000539702 DNAJC18Q9H819 358 aa16.56■□□□□ 0.24
DDX11-216ENST00000539702 SAP30BPQ9UHR5 308 aaKnown RBP16.56■□□□□ 0.24
DDX11-216ENST00000539702 MYH1P12882 1939 aa16.56■□□□□ 0.24
DDX11-216ENST00000539702 IDH1O75874 414 aaKnown RBP16.55■□□□□ 0.24
DDX11-216ENST00000539702 FARP2O94887 1054 aaPredicted RBP16.55■□□□□ 0.24
DDX11-216ENST00000539702 TFRCP02786 760 aaKnown RBP16.55■□□□□ 0.24
DDX11-216ENST00000539702 CYP7A1P22680 504 aa16.55■□□□□ 0.24
DDX11-216ENST00000539702 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDX11-216ENST00000539702 BACE1P56817 501 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms