RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZSWIM5Q9P217 1185 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 FBXO2Q9UK22 296 aaPredicted RBP11.08□□□□□ -0.64
CDH13-204ENST00000539548 SLC12A7Q9Y666 1083 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 MYH3P11055 1940 aa11.08□□□□□ -0.64
CDH13-204ENST00000539548 PATL2C9JE40 543 aaKnown RBP11.07□□□□□ -0.64
CDH13-204ENST00000539548 MMP1P03956 469 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 RILPL1Q5EBL4 403 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 KANK3Q6NY19 840 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 TOM1L2Q6ZVM7 507 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 GPR161Q8N6U8 529 aaKnown RBP11.07□□□□□ -0.64
CDH13-204ENST00000539548 FOXP1Q9H334 677 aaPredicted RBP11.07□□□□□ -0.64
CDH13-204ENST00000539548 CNNM1Q9NRU3 951 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 SHANK3Q9BYB0 1731 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 BTBD18B2RXH4 712 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 IFIT3O14879 490 aaKnown RBP11.07□□□□□ -0.64
CDH13-204ENST00000539548 PDE8BO95263 885 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 CDK11BP21127 795 aaKnown RBP11.07□□□□□ -0.64
CDH13-204ENST00000539548 CYP2C19P33261 490 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 NR1I3Q14994 352 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 GIGYF2Q6Y7W6 1299 aaKnown RBP11.07□□□□□ -0.64
CDH13-204ENST00000539548 PDILTQ8N807 584 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 SMARCE1Q969G3 411 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 AIDAQ96BJ3 306 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 UBXN6Q9BZV1 441 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 GREM2Q9H772 168 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 CNNM2Q9H8M5 875 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 SERTAD1Q9UHV2 236 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 WWC3Q9ULE0 1092 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 NFE2L3Q9Y4A8 694 aa11.07□□□□□ -0.64
CDH13-204ENST00000539548 IL2RBP14784 551 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 CTSWP56202 376 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 GNG11P61952 73 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 FMR1Q06787 632 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDH13-204ENST00000539548 PTPN21Q16825 1174 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 CT47A1Q5JQC4 288 aaPredicted RBP11.06□□□□□ -0.64
CDH13-204ENST00000539548 RSRC2Q7L4I2 434 aaKnown RBP11.06□□□□□ -0.64
CDH13-204ENST00000539548 NLRP10Q86W26 655 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 NUTM2AQ8IVF1 878 aaPredicted RBP11.06□□□□□ -0.64
CDH13-204ENST00000539548 DIS3L2Q8IYB7 885 aaKnown RBP11.06□□□□□ -0.64
CDH13-204ENST00000539548 IFNL3Q8IZI9 196 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 SYNE4Q8N205 404 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 WDR24Q96S15 920 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 KRT23Q9C075 422 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 INCENPQ9NQS7 918 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 MRFAP1Q9Y605 127 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 UBE2Q2LH0YL09 131 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 POLR2DO15514 142 aaKnown RBP11.06□□□□□ -0.64
CDH13-204ENST00000539548 ERCC5P28715 1186 aaPredicted RBP11.06□□□□□ -0.64
CDH13-204ENST00000539548 HSPA1LP34931 641 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 PHKA1P46020 1223 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 SPECC1Q5M775 1068 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 TRIM22Q8IYM9 498 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 SPATA20Q8TB22 786 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 MTA3Q9BTC8 594 aa11.06□□□□□ -0.64
CDH13-204ENST00000539548 ZNF330Q9Y3S2 320 aaPredicted RBP11.06□□□□□ -0.64
CDH13-204ENST00000539548 SRPRBQ9Y5M8 271 aaKnown RBP11.06□□□□□ -0.64
CDH13-204ENST00000539548 TIAM2Q8IVF5 1701 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 GUCY1A2P33402 732 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 ADKP55263 362 aaKnown RBP11.05□□□□□ -0.64
CDH13-204ENST00000539548 GRIN1Q05586 938 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 CTDSPL2Q05D32 466 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 AKNAD1Q5T1N1 836 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 TOGARAM2Q6ZUX3 1019 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 FAM177A1Q8N128 213 aaPredicted RBP11.05□□□□□ -0.64
CDH13-204ENST00000539548 RABGGTAQ92696 567 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 MED15Q96RN5 788 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 CARD10Q9BWT7 1032 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 NAPBQ9H115 298 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 EPB41L4AQ9HCS5 686 aaPredicted RBP11.05□□□□□ -0.64
CDH13-204ENST00000539548 RAI14Q9P0K7 980 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.05□□□□□ -0.64
CDH13-204ENST00000539548 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 TACC3Q9Y6A5 838 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 DOCK2Q92608 1830 aa11.05□□□□□ -0.64
CDH13-204ENST00000539548 ANKRD36CQ5JPF3 1778 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 A0A1B0GTH6 734 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 ACTN4O43707 911 aaKnown RBP11.04□□□□□ -0.64
CDH13-204ENST00000539548 TOM1O60784 492 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 DEXIO95424 95 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 PLCD1P51178 756 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 RCAN1P53805 252 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 PPP2R3AQ06190 1150 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 TEX35Q5T0J7 233 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 CC2D1AQ6P1N0 951 aaPredicted RBP11.04□□□□□ -0.64
CDH13-204ENST00000539548 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 DNAJC10Q8IXB1 793 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 TMTC2Q8N394 836 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 CRACR2BQ8N4Y2 399 aaPredicted RBP11.04□□□□□ -0.64
CDH13-204ENST00000539548 PANX2Q96RD6 677 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 CALCOCO1Q9P1Z2 691 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 KCNJ14Q9UNX9 436 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 CEP131Q9UPN4 1083 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 TOGARAM1Q9Y4F4 1720 aa11.04□□□□□ -0.64
CDH13-204ENST00000539548 CCDC196A0A1B0GTZ2 297 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms