RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 VPS33BQ9H267 617 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 PGAP2Q9UHJ9 254 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 ZNRF3Q9ULT6 936 aa10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 COLQQ9Y215 455 aaPredicted RBP10.91□□□□□ -0.66
RTN4IP1-204ENST00000539449 CEP290O15078 2479 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 IGSF3O75054 1194 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 VIL1P09327 827 aaKnown RBP10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 ATXN8OSP0DMR3 200 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 ZKSCAN1P17029 563 aaPredicted RBP10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 GNAT2P19087 354 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 CRKP46108 304 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 IMMTQ16891 758 aaKnown RBP10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 RNF20Q5VTR2 975 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 RSBN1LQ6PCB5 846 aaPredicted RBP10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 NOL8Q76FK4 1167 aaKnown RBP10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 STK11IPQ8N1F8 1099 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 NAPBQ9H115 298 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 DCP1AQ9NPI6 582 aaPredicted RBP10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 GPRC5DQ9NZD1 345 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 HDAC9Q9UKV0 1011 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 SUGT1Q9Y2Z0 365 aa10.9□□□□□ -0.66
RTN4IP1-204ENST00000539449 DDX60LQ5H9U9 1706 aaKnown RBP10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 SHTN1A0MZ66 631 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 ZNF213O14771 459 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 USP17L8P0C7I0 530 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 RPS6KB1P23443 525 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 TDO2P48775 406 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 AK2P54819 239 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 APOBEC3HQ6NTF7 200 aaKnown RBP10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 CTR9Q6PD62 1173 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 TMED8Q6PL24 325 aaPredicted RBP10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 RUFY3Q7L099 469 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 CDC37L1Q7L3B6 337 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 SPRYD3Q8NCJ5 442 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 TGFBRAP1Q8WUH2 860 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 CCDC102AQ96A19 550 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 NEK1Q96PY6 1258 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 CSRNP1Q96S65 589 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 LRRC2Q9BYS8 371 aa10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 CRNKL1Q9BZJ0 848 aaKnown RBP10.89□□□□□ -0.67
RTN4IP1-204ENST00000539449 ZMYM6O95789 1325 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 NEDD4P46934 1319 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 MINDY4BA8MYZ0 360 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 USP17L12C9JPN9 530 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 USP17L21D6R901 530 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 BAG3O95817 575 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 EXOSC10Q01780 885 aaKnown RBP10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 PPARAQ07869 468 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 SLC4A8Q2Y0W8 1093 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 CDC42EP5Q6NZY7 148 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 FBXO46Q6PJ61 603 aaPredicted RBP10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 BLOC1S2Q6QNY1 142 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 HHIPL2Q6UWX4 724 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 CHST3Q7LGC8 479 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 TEX11Q8IYF3 940 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 GPHNQ9NQX3 736 aaPredicted RBP10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 PDRG1Q9NUG6 133 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 USP40Q9NVE5 1235 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 SAP30BPQ9UHR5 308 aaKnown RBP10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 CYP46A1Q9Y6A2 500 aa10.88□□□□□ -0.67
RTN4IP1-204ENST00000539449 SIPA1L1O43166 1804 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 K7ELQ4 463 aaPredicted RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 LARGE1O95461 756 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 PSMA5P28066 241 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 USP5P45974 858 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 ZNF157P51786 506 aaPredicted RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 ANTXR2P58335 489 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 TOB2Q14106 344 aaPredicted RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 BECN1Q14457 450 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 KRT32Q14532 448 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 CFAP100Q494V2 611 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 GIMAP6Q6P9H5 292 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 CYB5R4Q7L1T6 521 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 HSCBQ8IWL3 235 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 SLF2Q8IX21 1173 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 MB21D2Q8IYB1 491 aaPredicted RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 ZC3H15Q8WU90 426 aaKnown RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 ZNF296Q8WUU4 475 aaPredicted RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 TEKT1Q969V4 418 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 PRMT6Q96LA8 375 aaPredicted RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 ZDHHC15Q96MV8 337 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 NOL10Q9BSC4 688 aaKnown RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 MRIQ9BWK5 157 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 NACAP1Q9BZK3 213 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 DDX4Q9NQI0 724 aaKnown RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 ATP8A2Q9NTI2 1148 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 RBBP6Q7Z6E9 1792 aaKnown RBP10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 PAPPA2Q9BXP8 1791 aa10.87□□□□□ -0.67
RTN4IP1-204ENST00000539449 B4E1Z4 1266 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 ST18O60284 1047 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 DTNBO60941 627 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 WDHD1O75717 1129 aaPredicted RBP10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 RBM5P52756 815 aaKnown RBP eCLIP10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 HIRAP54198 1017 aaPredicted RBP10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 CACNB3P54284 484 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 HDLBPQ00341 1268 aaKnown RBP10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 NFIAQ12857 509 aa10.86□□□□□ -0.67
RTN4IP1-204ENST00000539449 SBK1Q52WX2 424 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms