RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 COL2A1P02458 1487 aaPredicted RBP12.61□□□□□ -0.39
LEMD3-202ENST00000539442 MINDY4BA8MYZ0 360 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 MYO1BO43795 1136 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 ENTPD3O75355 529 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 RPS6KB1P23443 525 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 C12orf60Q5U649 245 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 FKBP1CQ5VVH2 108 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 MFSD6Q6ZSS7 791 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 RALYLQ86SE5 291 aaKnown RBP12.61□□□□□ -0.39
LEMD3-202ENST00000539442 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 HSCBQ8IWL3 235 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 MICALL2Q8IY33 904 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 PRMT6Q96LA8 375 aaPredicted RBP12.61□□□□□ -0.39
LEMD3-202ENST00000539442 KRT23Q9C075 422 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 OSBPL5Q9H0X9 879 aaPredicted RBP12.61□□□□□ -0.39
LEMD3-202ENST00000539442 ALDH8A1Q9H2A2 487 aaPredicted RBP12.61□□□□□ -0.39
LEMD3-202ENST00000539442 CNOT7Q9UIV1 285 aaKnown RBP12.61□□□□□ -0.39
LEMD3-202ENST00000539442 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 NAV1Q8NEY1 1877 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 WDR19Q8NEZ3 1342 aa12.61□□□□□ -0.39
LEMD3-202ENST00000539442 FOCADQ5VW36 1801 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 POLR3DP05423 398 aaPredicted RBP12.6□□□□□ -0.39
LEMD3-202ENST00000539442 FGRP09769 529 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
LEMD3-202ENST00000539442 CTDSPL2Q05D32 466 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 PICALMQ13492 652 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
LEMD3-202ENST00000539442 TTC6Q86TZ1 520 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 TTC14Q96N46 770 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
LEMD3-202ENST00000539442 TSPYL2Q9H2G4 693 aaPredicted RBP12.6□□□□□ -0.39
LEMD3-202ENST00000539442 DHX36Q9H2U1 1008 aaKnown RBP12.6□□□□□ -0.39
LEMD3-202ENST00000539442 TDRD3Q9H7E2 651 aaKnown RBP12.6□□□□□ -0.39
LEMD3-202ENST00000539442 DDX4Q9NQI0 724 aaKnown RBP12.6□□□□□ -0.39
LEMD3-202ENST00000539442 PDRG1Q9NUG6 133 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 GPRC5DQ9NZD1 345 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 PCDHAC2Q9Y5I4 1007 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 LAMB1P07942 1786 aa12.6□□□□□ -0.39
LEMD3-202ENST00000539442 H7C1D1 291 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 WNT10BO00744 389 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 ORC4O43929 436 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 HLA-DOAP06340 250 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 MCM5P33992 734 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 PDE4BQ07343 736 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 NFIAQ12857 509 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 ANKRD1Q15327 319 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 DPY19L2Q6NUT2 758 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 MB21D2Q8IYB1 491 aaPredicted RBP12.59□□□□□ -0.39
LEMD3-202ENST00000539442 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 ZNF287Q9HBT7 754 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 ZNF70Q9UC06 446 aaPredicted RBP12.59□□□□□ -0.39
LEMD3-202ENST00000539442 FAM198AQ9UFP1 575 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
LEMD3-202ENST00000539442 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 NEDD4P46934 1319 aa12.59□□□□□ -0.39
LEMD3-202ENST00000539442 ATRNL1Q5VV63 1379 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 CYP2D7A0A087X1C5 515 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
LEMD3-202ENST00000539442 CYP2D6P10635 497 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 EXOSC10Q01780 885 aaKnown RBP12.58□□□□□ -0.4
LEMD3-202ENST00000539442 KIF4BQ2VIQ3 1234 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 IER5LQ5T953 404 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 FBXL16Q8N461 479 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 ESR2Q92731 530 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 L3MBTL3Q96JM7 780 aaPredicted RBP12.58□□□□□ -0.4
LEMD3-202ENST00000539442 EHD4Q9H223 541 aa12.58□□□□□ -0.4
LEMD3-202ENST00000539442 SAP30BPQ9UHR5 308 aaKnown RBP12.58□□□□□ -0.4
LEMD3-202ENST00000539442 BAZ2AQ9UIF9 1905 aaKnown RBP12.58□□□□□ -0.4
LEMD3-202ENST00000539442 GOLGB1Q14789 3259 aaKnown RBP12.57□□□□□ -0.4
LEMD3-202ENST00000539442 SHTN1A0MZ66 631 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 DDNO94850 711 aaPredicted RBP12.57□□□□□ -0.4
LEMD3-202ENST00000539442 CD2BP2O95400 341 aaKnown RBP12.57□□□□□ -0.4
LEMD3-202ENST00000539442 CPA1P15085 419 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 LMOD1P29536 600 aaPredicted RBP12.57□□□□□ -0.4
LEMD3-202ENST00000539442 PLCD1P51178 756 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 CACNB3P54284 484 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 AK2P54819 239 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 TNFAIP1Q13829 316 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 C16orf86Q6ZW13 317 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 FAM83AQ86UY5 434 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 FAM151AQ8WW52 585 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 TMEM87BQ96K49 555 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 AGXT2Q9BYV1 514 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 TACC3Q9Y6A5 838 aa12.57□□□□□ -0.4
LEMD3-202ENST00000539442 CLRN2A0PK11 232 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 B4E1Z4 1266 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 PRC1O43663 620 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 TNNI2P48788 182 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 ANTXR2P58335 489 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 GABPAQ06546 454 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 NBPF9Q3BBW0 867 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 TBC1D10BQ4KMP7 808 aaPredicted RBP12.56□□□□□ -0.4
LEMD3-202ENST00000539442 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 KIF12Q96FN5 646 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 ADARB2Q9NS39 739 aaKnown RBP12.56□□□□□ -0.4
LEMD3-202ENST00000539442 PI4KBQ9UBF8 816 aa12.56□□□□□ -0.4
LEMD3-202ENST00000539442 DAXXQ9UER7 740 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms