RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LLGL2Q6P1M3 1020 aa10.04□□□□□ -0.8
CCDC7-209ENST00000539197 ZSCAN29Q8IWY8 852 aaPredicted RBP10.04□□□□□ -0.8
CCDC7-209ENST00000539197 LRRN4CLQ8ND94 238 aa10.04□□□□□ -0.8
CCDC7-209ENST00000539197 PRDM10Q9NQV6 1147 aa10.04□□□□□ -0.8
CCDC7-209ENST00000539197 PCDHA4Q9UN74 947 aa10.04□□□□□ -0.8
CCDC7-209ENST00000539197 SNX11Q9Y5W9 270 aa10.04□□□□□ -0.8
CCDC7-209ENST00000539197 INPP5AQ14642 412 aa10.03□□□□□ -0.8
CCDC7-209ENST00000539197 ZBTB37Q5TC79 503 aa10.03□□□□□ -0.8
CCDC7-209ENST00000539197 ASB16Q96NS5 453 aa10.03□□□□□ -0.8
CCDC7-209ENST00000539197 TNKS2Q9H2K2 1166 aa10.03□□□□□ -0.8
CCDC7-209ENST00000539197 GIPC1O14908 333 aa10.02□□□□□ -0.81
CCDC7-209ENST00000539197 LRRC14Q15048 493 aa10.02□□□□□ -0.81
CCDC7-209ENST00000539197 ZNF648Q5T619 568 aaPredicted RBP10.02□□□□□ -0.81
CCDC7-209ENST00000539197 PCNX4Q63HM2 1172 aa10.02□□□□□ -0.81
CCDC7-209ENST00000539197 ALG1LQ6GMV1 187 aa10.02□□□□□ -0.81
CCDC7-209ENST00000539197 IGF2BP3O00425 579 aaKnown RBP eCLIP10.01□□□□□ -0.81
CCDC7-209ENST00000539197 FANCGO15287 622 aa10.01□□□□□ -0.81
CCDC7-209ENST00000539197 EOMESO95936 686 aa10.01□□□□□ -0.81
CCDC7-209ENST00000539197 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
CCDC7-209ENST00000539197 CDC37L1Q7L3B6 337 aa10.01□□□□□ -0.81
CCDC7-209ENST00000539197 SPACA3Q8IXA5 215 aa10.01□□□□□ -0.81
CCDC7-209ENST00000539197 USP17L7P0C7H9 530 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 CDK8P49336 464 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 JAG1P78504 1218 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 NKPD1Q17RQ9 610 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 SCARA3Q6AZY7 606 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 SLC23A3Q6PIS1 610 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 LRFN4Q6PJG9 635 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 PDZRN4Q6ZMN7 1036 aaPredicted RBP10□□□□□ -0.81
CCDC7-209ENST00000539197 ASB11Q8WXH4 323 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 FAM168AQ92567 244 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 C12orf49Q9H741 205 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 FBRSQ9HAH7 460 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 CNTNAP4Q9C0A0 1308 aa10□□□□□ -0.81
CCDC7-209ENST00000539197 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
CCDC7-209ENST00000539197 KCT2Q8NC54 265 aa9.99□□□□□ -0.81
CCDC7-209ENST00000539197 ANKRD24Q8TF21 1146 aa9.99□□□□□ -0.81
CCDC7-209ENST00000539197 RNF19AQ9NV58 838 aa9.99□□□□□ -0.81
CCDC7-209ENST00000539197 PRAMEF27A3QJZ7 478 aa9.98□□□□□ -0.81
CCDC7-209ENST00000539197 ARMCX6Q7L4S7 300 aa9.98□□□□□ -0.81
CCDC7-209ENST00000539197 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
CCDC7-209ENST00000539197 CYP8B1Q9UNU6 501 aa9.98□□□□□ -0.81
CCDC7-209ENST00000539197 SPG7Q9UQ90 795 aa9.98□□□□□ -0.81
CCDC7-209ENST00000539197 GNAT3A8MTJ3 354 aa9.97□□□□□ -0.81
CCDC7-209ENST00000539197 IKZF1Q13422 519 aa9.97□□□□□ -0.81
CCDC7-209ENST00000539197 TMEM40Q8WWA1 233 aa9.97□□□□□ -0.81
CCDC7-209ENST00000539197 PLPPR2Q96GM1 343 aa9.97□□□□□ -0.81
CCDC7-209ENST00000539197 PRR33A8MZF0 331 aa9.96□□□□□ -0.82
CCDC7-209ENST00000539197 SLITRK5O94991 958 aa9.96□□□□□ -0.82
CCDC7-209ENST00000539197 ZNF124Q15973 351 aa9.96□□□□□ -0.82
CCDC7-209ENST00000539197 NKG7Q16617 165 aa9.96□□□□□ -0.82
CCDC7-209ENST00000539197 ZNF507Q8TCN5 953 aa9.96□□□□□ -0.82
CCDC7-209ENST00000539197 GAL3ST3Q96A11 431 aa9.96□□□□□ -0.82
CCDC7-209ENST00000539197 FARP2O94887 1054 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-209ENST00000539197 PRDM5Q9NQX1 630 aaPredicted RBP9.95□□□□□ -0.82
CCDC7-209ENST00000539197 FAM8A1Q9UBU6 413 aa9.95□□□□□ -0.82
CCDC7-209ENST00000539197 LRIG2O94898 1065 aa9.94□□□□□ -0.82
CCDC7-209ENST00000539197 LDHBP07195 334 aaKnown RBP9.94□□□□□ -0.82
CCDC7-209ENST00000539197 ZP2Q05996 745 aa9.94□□□□□ -0.82
CCDC7-209ENST00000539197 SLBPQ14493 270 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC7-209ENST00000539197 CYFIP1Q7L576 1253 aa9.94□□□□□ -0.82
CCDC7-209ENST00000539197 TTF2Q9UNY4 1162 aaKnown RBP9.94□□□□□ -0.82
CCDC7-209ENST00000539197 CLCN7P51798 805 aa9.93□□□□□ -0.82
CCDC7-209ENST00000539197 FLAD1Q8NFF5 587 aa9.93□□□□□ -0.82
CCDC7-209ENST00000539197 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
CCDC7-209ENST00000539197 FOXQ1Q9C009 403 aa9.93□□□□□ -0.82
CCDC7-209ENST00000539197 PITPNM2Q9BZ72 1349 aa9.92□□□□□ -0.82
CCDC7-209ENST00000539197 TTBK2Q6IQ55 1244 aa9.92□□□□□ -0.82
CCDC7-209ENST00000539197 MAPK8IP1Q9UQF2 711 aa9.92□□□□□ -0.82
CCDC7-209ENST00000539197 PCDHB5Q9Y5E4 795 aa9.92□□□□□ -0.82
CCDC7-209ENST00000539197 ARID1BQ8NFD5 2236 aaPredicted RBP9.92□□□□□ -0.82
CCDC7-209ENST00000539197 KCNA1Q09470 495 aa9.91□□□□□ -0.82
CCDC7-209ENST00000539197 PKN1Q16512 942 aa9.91□□□□□ -0.82
CCDC7-209ENST00000539197 WIPI1Q5MNZ9 446 aaPredicted RBP9.91□□□□□ -0.82
CCDC7-209ENST00000539197 HDXQ7Z353 690 aa9.91□□□□□ -0.82
CCDC7-209ENST00000539197 SEPT6Q14141 434 aa9.9□□□□□ -0.82
CCDC7-209ENST00000539197 SV2BQ7L1I2 683 aa9.9□□□□□ -0.82
CCDC7-209ENST00000539197 KSR1Q8IVT5 923 aa9.9□□□□□ -0.82
CCDC7-209ENST00000539197 HSPA12BQ96MM6 686 aa9.9□□□□□ -0.82
CCDC7-209ENST00000539197 MIPEPQ99797 713 aa9.9□□□□□ -0.82
CCDC7-209ENST00000539197 WNT10AQ9GZT5 417 aa9.9□□□□□ -0.82
CCDC7-209ENST00000539197 ATP13A1Q9HD20 1204 aa9.9□□□□□ -0.82
CCDC7-209ENST00000539197 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC7-209ENST00000539197 CDKAL1Q5VV42 579 aa9.89□□□□□ -0.83
CCDC7-209ENST00000539197 FYB2Q5VWT5 728 aa9.89□□□□□ -0.83
CCDC7-209ENST00000539197 ZSWIM9Q86XI8 627 aa9.89□□□□□ -0.83
CCDC7-209ENST00000539197 XAGE3Q8WTP9 111 aa9.89□□□□□ -0.83
CCDC7-209ENST00000539197 FRMD6Q96NE9 622 aa9.89□□□□□ -0.83
CCDC7-209ENST00000539197 LMCD1Q9NZU5 365 aa9.89□□□□□ -0.83
CCDC7-209ENST00000539197 TPX2Q9ULW0 747 aaKnown RBP9.89□□□□□ -0.83
CCDC7-209ENST00000539197 FAM155AB1AL88 458 aaPredicted RBP9.88□□□□□ -0.83
CCDC7-209ENST00000539197 ETF1P62495 437 aaKnown RBP9.88□□□□□ -0.83
CCDC7-209ENST00000539197 FGD1P98174 961 aa9.88□□□□□ -0.83
CCDC7-209ENST00000539197 KCNMB1Q16558 191 aa9.88□□□□□ -0.83
CCDC7-209ENST00000539197 MAP3K11Q16584 847 aa9.88□□□□□ -0.83
CCDC7-209ENST00000539197 SEMA3GQ9NS98 782 aa9.88□□□□□ -0.83
CCDC7-209ENST00000539197 CTNND2Q9UQB3 1225 aa9.88□□□□□ -0.83
CCDC7-209ENST00000539197 ZNF503-AS2A6NEH8 195 aa9.87□□□□□ -0.83
CCDC7-209ENST00000539197 DBX1A6NMT0 343 aa9.87□□□□□ -0.83
CCDC7-209ENST00000539197 GNA15P30679 374 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms