RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 KLRG2A4D1S0 409 aaPredicted RBP16.82■□□□□ 0.28
CDCA3-207ENST00000538862 KIF28PB7ZC32 967 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 TNNT1P13805 278 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 SLC39A14Q15043 492 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 STYK1Q6J9G0 422 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 AOPEPQ8N6M6 819 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 PIH1D3Q9NQM4 214 aaKnown RBP16.82■□□□□ 0.28
CDCA3-207ENST00000538862 ZNF202O95125 648 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 METAP2P50579 478 aaKnown RBP eCLIP16.82■□□□□ 0.28
CDCA3-207ENST00000538862 SYCP1Q15431 976 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 AXDND1Q5T1B0 1012 aaPredicted RBP16.82■□□□□ 0.28
CDCA3-207ENST00000538862 CCDC102BQ68D86 513 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 TBC1D10CQ8IV04 446 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 ZNF526Q8TF50 670 aaPredicted RBP16.82■□□□□ 0.28
CDCA3-207ENST00000538862 CNKSR1Q969H4 720 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 IMPACTQ9P2X3 320 aa16.82■□□□□ 0.28
CDCA3-207ENST00000538862 TRMT112Q9UI30 125 aaKnown RBP16.82■□□□□ 0.28
CDCA3-207ENST00000538862 NEDD4P46934 1319 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 ZNF532Q9HCE3 1301 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 IDH1O75874 414 aaKnown RBP16.81■□□□□ 0.28
CDCA3-207ENST00000538862 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
CDCA3-207ENST00000538862 NPR1P16066 1061 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 PDE6AP16499 860 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 GSDMDP57764 484 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 TPD52L1Q16890 204 aaPredicted RBP16.81■□□□□ 0.28
CDCA3-207ENST00000538862 OLFM4Q6UX06 510 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 CYB5R4Q7L1T6 521 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 ANKRD7Q92527 254 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 C16orf45Q96MC5 204 aaPredicted RBP16.81■□□□□ 0.28
CDCA3-207ENST00000538862 KCND1Q9NSA2 647 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
CDCA3-207ENST00000538862 MYO5AQ9Y4I1 1855 aaKnown RBP16.8■□□□□ 0.28
CDCA3-207ENST00000538862 LAMB2P55268 1798 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 TCRBV5S4A2TA0A5A2 114 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 PPP6R2O75170 966 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 NLRP12P59046 1061 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
CDCA3-207ENST00000538862 C9orf131Q5VYM1 1079 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 SGMS1Q86VZ5 419 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 LPIN2Q92539 896 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 ALG1Q9BT22 464 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 APPP05067 770 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 FGFR2P21802 821 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 PRELPP51888 382 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 PUM3Q15397 648 aaKnown RBP16.8■□□□□ 0.28
CDCA3-207ENST00000538862 APOA5Q6Q788 366 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 RAB11FIP4Q86YS3 637 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 JMYQ8N9B5 988 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 STRBPQ96SI9 672 aaKnown RBP16.8■□□□□ 0.28
CDCA3-207ENST00000538862 OSBPL5Q9H0X9 879 aaPredicted RBP16.8■□□□□ 0.28
CDCA3-207ENST00000538862 GJB4Q9NTQ9 266 aa16.8■□□□□ 0.28
CDCA3-207ENST00000538862 ARAP2Q8WZ64 1704 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 FER1L6Q2WGJ9 1857 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 A0A087WWV3 80 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 CCDC69A6NI79 296 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 NFKBIEO00221 500 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 SKILP12757 684 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 PHKA1P46020 1223 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 TPM4P67936 248 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 CRY2Q49AN0 593 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 SLC51AQ86UW1 340 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 IGDCC4Q8TDY8 1250 aa16.79■□□□□ 0.28
CDCA3-207ENST00000538862 ERCC4Q92889 916 aaPredicted RBP16.79■□□□□ 0.28
CDCA3-207ENST00000538862 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-207ENST00000538862 FAM237AA0A1B0GTK4 181 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 PFKFB1P16118 471 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 LIFRP42702 1097 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 CCZ1BP86790 482 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 CCZ1P86791 482 aaPredicted RBP16.78■□□□□ 0.28
CDCA3-207ENST00000538862 DPCR1Q3MIW9 517 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 KRT40Q6A162 431 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 RPGRQ92834 1020 aaKnown RBP16.78■□□□□ 0.28
CDCA3-207ENST00000538862 AIDAQ96BJ3 306 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 RNF181Q9P0P0 153 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 TAF1P21675 1872 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 B4E1Z4 1266 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 PATL2C9JE40 543 aaKnown RBP16.78■□□□□ 0.28
CDCA3-207ENST00000538862 ZBTB43O43298 467 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 U2AF2P26368 475 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDCA3-207ENST00000538862 NTRK3Q16288 839 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 VPS37DQ86XT2 251 aa16.78■□□□□ 0.28
CDCA3-207ENST00000538862 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.28
CDCA3-207ENST00000538862 CDC27P30260 824 aa16.77■□□□□ 0.28
CDCA3-207ENST00000538862 ARID5BQ14865 1188 aa16.77■□□□□ 0.28
CDCA3-207ENST00000538862 FILIP1Q7Z7B0 1213 aa16.77■□□□□ 0.28
CDCA3-207ENST00000538862 NBPF11Q86T75 865 aa16.77■□□□□ 0.28
CDCA3-207ENST00000538862 NLRP3Q96P20 1036 aa16.77■□□□□ 0.28
CDCA3-207ENST00000538862 LY9Q9HBG7 655 aa16.77■□□□□ 0.28
CDCA3-207ENST00000538862 DENND2AQ9ULE3 1009 aa16.77■□□□□ 0.28
CDCA3-207ENST00000538862 HPSEQ9Y251 543 aa16.77■□□□□ 0.28
CDCA3-207ENST00000538862 STK36Q9NRP7 1315 aa16.77■□□□□ 0.27
CDCA3-207ENST00000538862 DOCK2Q92608 1830 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 IKBKBO14920 756 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 IARSP41252 1262 aaKnown RBP16.76■□□□□ 0.27
CDCA3-207ENST00000538862 MAP3K12Q12852 859 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 PTPAQ15257 358 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 SLC10A5Q5PT55 438 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 CEP135Q66GS9 1140 aa16.76■□□□□ 0.27
CDCA3-207ENST00000538862 NYAP1Q6ZVC0 841 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms