RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SLC4A8Q2Y0W8 1093 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 NAA16Q6N069 864 aaPredicted RBP10.6□□□□□ -0.71
DDB1-212ENST00000538470 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
DDB1-212ENST00000538470 GADL1Q6ZQY3 521 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 TBC1D9Q6ZT07 1266 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 CERS3Q8IU89 383 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 PROCA1Q8NCQ7 364 aaPredicted RBP10.6□□□□□ -0.71
DDB1-212ENST00000538470 DBNDD2Q9BQY9 259 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 DHX36Q9H2U1 1008 aaKnown RBP10.6□□□□□ -0.71
DDB1-212ENST00000538470 HERC5Q9UII4 1024 aaKnown RBP10.6□□□□□ -0.71
DDB1-212ENST00000538470 AGTPBP1Q9UPW5 1226 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 DOCK3Q8IZD9 2030 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 TRIM75PA6NK02 468 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
DDB1-212ENST00000538470 CYP2C8P10632 490 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 EN2P19622 333 aaPredicted RBP10.59□□□□□ -0.71
DDB1-212ENST00000538470 CTGFP29279 349 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 PPP4CP60510 307 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 ERC1Q8IUD2 1116 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 RAET1EQ8TD07 263 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 SH3RF3Q8TEJ3 882 aaPredicted RBP10.59□□□□□ -0.71
DDB1-212ENST00000538470 SMCR8Q8TEV9 937 aaPredicted RBP10.59□□□□□ -0.71
DDB1-212ENST00000538470 SH3TC2Q8TF17 1288 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 C1orf115Q9H7X2 142 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 AS3MTQ9HBK9 375 aa10.59□□□□□ -0.71
DDB1-212ENST00000538470 ZBTB7BO15156 539 aaPredicted RBP10.58□□□□□ -0.72
DDB1-212ENST00000538470 CYP2E1P05181 493 aaPredicted RBP10.58□□□□□ -0.72
DDB1-212ENST00000538470 MS4A1P11836 297 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 RLBP1P12271 317 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 GRK4P32298 578 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 CAP2P40123 477 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 PABPC4Q13310 644 aaKnown RBP eCLIP10.58□□□□□ -0.722e-14■□□□□ 10.9
DDB1-212ENST00000538470 CEP85Q6P2H3 762 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 SLAIN1Q8ND83 568 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 NKX2-3Q8TAU0 364 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 GINM1Q9NU53 330 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 AATFQ9NY61 560 aaKnown RBP eCLIP10.58□□□□□ -0.72
DDB1-212ENST00000538470 PI4KBQ9UBF8 816 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 DBNLQ9UJU6 430 aaKnown RBP10.58□□□□□ -0.72
DDB1-212ENST00000538470 MYH7P12883 1935 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 MYH8P13535 1937 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 FLT1P17948 1338 aa10.58□□□□□ -0.72
DDB1-212ENST00000538470 FAM196BA6NMK8 535 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 USP17L5A8MUK1 530 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 CAPN2P17655 700 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 UBXN2AP68543 259 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 PRKCZQ05513 592 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 FAM110CQ1W6H9 321 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 HSP90AB4PQ58FF6 505 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 SH3D19Q5HYK7 790 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 SNRKQ9NRH2 765 aa10.57□□□□□ -0.72
DDB1-212ENST00000538470 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 HLA-DOAP06340 250 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 ASNSP08243 561 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 SLURP2P0DP57 97 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 ZAP70P43403 619 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 GCLCP48506 637 aaPredicted RBP10.56□□□□□ -0.72
DDB1-212ENST00000538470 IRF5Q13568 498 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 ADGRA1Q86SQ6 560 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 METTL16Q86W50 562 aaKnown RBP10.56□□□□□ -0.72
DDB1-212ENST00000538470 PXYLP1Q8TE99 480 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 TGFBRAP1Q8WUH2 860 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 WDR18Q9BV38 432 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 TRIM34Q9BYJ4 488 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 TLR7Q9NYK1 1049 aaKnown RBP10.56□□□□□ -0.72
DDB1-212ENST00000538470 PCDH10Q9P2E7 1040 aa10.56□□□□□ -0.72
DDB1-212ENST00000538470 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.56□□□□□ -0.72
DDB1-212ENST00000538470 TNPO2O14787 897 aaKnown RBP10.55□□□□□ -0.72
DDB1-212ENST00000538470 GJB1P08034 283 aa10.55□□□□□ -0.72
DDB1-212ENST00000538470 CCL5P13501 91 aa10.55□□□□□ -0.72
DDB1-212ENST00000538470 SPP2Q13103 211 aa10.55□□□□□ -0.72
DDB1-212ENST00000538470 TREML2Q5T2D2 321 aa10.55□□□□□ -0.72
DDB1-212ENST00000538470 CCDC84Q86UT8 332 aaPredicted RBP10.55□□□□□ -0.72
DDB1-212ENST00000538470 FOXP4Q8IVH2 680 aaPredicted RBP10.55□□□□□ -0.72
DDB1-212ENST00000538470 MAPKAPK5Q8IW41 473 aa10.55□□□□□ -0.72
DDB1-212ENST00000538470 COA7Q96BR5 231 aa10.55□□□□□ -0.72
DDB1-212ENST00000538470 EAF2Q96CJ1 260 aaPredicted RBP10.55□□□□□ -0.72
DDB1-212ENST00000538470 SHISA4Q96DD7 197 aa10.55□□□□□ -0.72
DDB1-212ENST00000538470 DNAJC18Q9H819 358 aa10.55□□□□□ -0.72
DDB1-212ENST00000538470 PIH1D3Q9NQM4 214 aaKnown RBP10.55□□□□□ -0.72
DDB1-212ENST00000538470 ADCY3O60266 1144 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
DDB1-212ENST00000538470 ECM2O94769 699 aaPredicted RBP10.54□□□□□ -0.72
DDB1-212ENST00000538470 CYP7A1P22680 504 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 GJA8P48165 433 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 HMGCS2P54868 508 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 MAP3K12Q12852 859 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 MTFR1Q15390 333 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 AACSQ86V21 672 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 CRACR2BQ8N4Y2 399 aaPredicted RBP10.54□□□□□ -0.72
DDB1-212ENST00000538470 ANKRD13CQ8N6S4 541 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
DDB1-212ENST00000538470 CCDC8Q9H0W5 538 aaPredicted RBP10.54□□□□□ -0.72
DDB1-212ENST00000538470 BIN2Q9UBW5 565 aaPredicted RBP10.54□□□□□ -0.72
DDB1-212ENST00000538470 ZBTB21Q9ULJ3 1066 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 GABRQQ9UN88 632 aa10.54□□□□□ -0.72
DDB1-212ENST00000538470 C19orf81C9J6K1 198 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 HMMRO75330 724 aa10.53□□□□□ -0.72
DDB1-212ENST00000538470 MYCP01106 439 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms