RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 CLIC4Q9Y696 253 aa10.75□□□□□ -0.69
DDB1-211ENST00000538280 PDS5AQ29RF7 1337 aaKnown RBP10.75□□□□□ -0.69
DDB1-211ENST00000538280 MYH13Q9UKX3 1938 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 GLTPD2A6NH11 291 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 GOLGA6L6A8MZA4 724 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 CPLX1O14810 134 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 ZBTB43O43298 467 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 RANBP6O60518 1105 aaKnown RBP10.74□□□□□ -0.69
DDB1-211ENST00000538280 ZPR1O75312 459 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 SERPINB2P05120 415 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 LMNB1P20700 586 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 CDC27P30260 824 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 ZNF165P49910 485 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 BCAMP50895 628 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 ZNF75DP51815 510 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 CEBPZQ03701 1054 aaKnown RBP10.74□□□□□ -0.69
DDB1-211ENST00000538280 AXDND1Q5T1B0 1012 aaPredicted RBP10.74□□□□□ -0.69
DDB1-211ENST00000538280 OTUD7BQ6GQQ9 843 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 BICDL1Q6ZP65 573 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 C2CD5Q86YS7 1000 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 LCORLQ8N3X6 602 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 ALG1Q9BT22 464 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 DNAJC25Q9H1X3 360 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 KCNF1Q9H3M0 494 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
DDB1-211ENST00000538280 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
DDB1-211ENST00000538280 ADAMTSL1Q8N6G6 1762 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 TAF1P21675 1872 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 GOLGA8AA7E2F4 631 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 SPTLC2O15270 562 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 KINO60870 393 aaKnown RBP10.73□□□□□ -0.69
DDB1-211ENST00000538280 PPP6R2O75170 966 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 APPP05067 770 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 IFNAR1P17181 557 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 U2AF2P26368 475 aaKnown RBP eCLIP10.73□□□□□ -0.69
DDB1-211ENST00000538280 ME1P48163 572 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 CTDSPL2Q05D32 466 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 STK38Q15208 465 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 TMEM67Q5HYA8 995 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 ANO1Q5XXA6 986 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 TBC1D9BQ66K14 1250 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 KRT40Q6A162 431 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 CPLX2Q6PUV4 134 aaKnown RBP10.73□□□□□ -0.69
DDB1-211ENST00000538280 C11orf57Q6ZUT1 292 aaPredicted RBP10.73□□□□□ -0.69
DDB1-211ENST00000538280 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 RAB11FIP4Q86YS3 637 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 KIAA1524Q8TCG1 905 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 TTC12Q9H892 705 aaPredicted RBP10.73□□□□□ -0.69
DDB1-211ENST00000538280 BSDC1Q9NW68 430 aaPredicted RBP10.73□□□□□ -0.69
DDB1-211ENST00000538280 ZSWIM5Q9P217 1185 aa10.73□□□□□ -0.69
DDB1-211ENST00000538280 ZC3H4Q9UPT8 1303 aaKnown RBP10.73□□□□□ -0.69
DDB1-211ENST00000538280 FAM177BA6PVY3 158 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 SEMA3EO15041 775 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 PRKAB2O43741 272 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 PPFIA3O75145 1194 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
DDB1-211ENST00000538280 VEGFAP15692 232 aaPredicted RBP10.72□□□□□ -0.69
DDB1-211ENST00000538280 SLC39A14Q15043 492 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 PTPAQ15257 358 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 ANKRD18AQ8IVF6 992 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 TTLL6Q8N841 843 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 TIGD1Q96MW7 591 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 ZNF830Q96NB3 372 aaPredicted RBP10.72□□□□□ -0.69
DDB1-211ENST00000538280 AIFM3Q96NN9 605 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 BPIFA3Q9BQP9 254 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 RIOK1Q9BRS2 568 aaKnown RBP10.72□□□□□ -0.69
DDB1-211ENST00000538280 NACAP1Q9BZK3 213 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 GJB4Q9NTQ9 266 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 ANO10Q9NW15 660 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 HPSEQ9Y251 543 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 SLC4A4Q9Y6R1 1079 aa10.72□□□□□ -0.69
DDB1-211ENST00000538280 C21orf2O43822 256 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 FGRP09769 529 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 CMA1P23946 247 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 IARSP41252 1262 aaKnown RBP10.71□□□□□ -0.69
DDB1-211ENST00000538280 NDUFA8P51970 172 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 PPARAQ07869 468 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 NOLC1Q14978 699 aaKnown RBP eCLIP10.71□□□□□ -0.69
DDB1-211ENST00000538280 SEC23AQ15436 765 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 TMED8Q6PL24 325 aaPredicted RBP10.71□□□□□ -0.69
DDB1-211ENST00000538280 MFSD6Q6ZSS7 791 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 NBPF11Q86T75 865 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 VPS37DQ86XT2 251 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 MRFAP1L1Q96HT8 127 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 MAP3K14Q99558 947 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 RNF41Q9H4P4 317 aaPredicted RBP10.71□□□□□ -0.69
DDB1-211ENST00000538280 MINPP1Q9UNW1 487 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 IRS2Q9Y4H2 1338 aa10.71□□□□□ -0.69
DDB1-211ENST00000538280 MORC2Q9Y6X9 1032 aaPredicted RBP10.71□□□□□ -0.69
DDB1-211ENST00000538280 MROH7-TTC4A0A0A0MT08 1334 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 CCDC69A6NI79 296 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 IFIT3O14879 490 aaKnown RBP10.7□□□□□ -0.7
DDB1-211ENST00000538280 IGSF3O75054 1194 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 POLR3DP05423 398 aaPredicted RBP10.7□□□□□ -0.7
DDB1-211ENST00000538280 CYP7A1P22680 504 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 TDO2P48775 406 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 SYNE3Q6ZMZ3 975 aa10.7□□□□□ -0.7
DDB1-211ENST00000538280 FBXO33Q7Z6M2 555 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms