RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 CTR9Q6PD62 1173 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 TNKSO95271 1327 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 TAF1LQ8IZX4 1826 aa13.22□□□□□ -0.29
SLC28A1-204ENST00000538177 FAM237AA0A1B0GTK4 181 aa13.21□□□□□ -0.29
SLC28A1-204ENST00000538177 IGSF3O75054 1194 aa13.21□□□□□ -0.29
SLC28A1-204ENST00000538177 ZNF202O95125 648 aa13.21□□□□□ -0.29
SLC28A1-204ENST00000538177 MMP1P03956 469 aa13.21□□□□□ -0.29
SLC28A1-204ENST00000538177 SARM1Q6SZW1 724 aa13.21□□□□□ -0.29
SLC28A1-204ENST00000538177 KIAA1468Q9P260 1216 aa13.21□□□□□ -0.29
SLC28A1-204ENST00000538177 ECM29Q5VYK3 1845 aa13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 NFIXQ14938 502 aa13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 TXNRD3Q86VQ6 643 aa13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 NOSTRINQ8IVI9 506 aa13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 ENAHQ8N8S7 591 aaPredicted RBP13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 TIGD1Q96MW7 591 aa13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 ZSCAN10Q96SZ4 725 aaPredicted RBP13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 TRIM5Q9C035 493 aa13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 HPSEQ9Y251 543 aa13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.21□□□□□ -0.3
SLC28A1-204ENST00000538177 CYP2D7A0A087X1C5 515 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 USP17L12C9JPN9 530 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 USP17L21D6R901 530 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 GOLGA6L19H0YKK7 550 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 PFKFB1P16118 471 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 MARCKSP29966 332 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 SAFBQ15424 915 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 FAM196AQ6ZSG2 479 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 SPC24Q8NBT2 197 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 CRNKL1Q9BZJ0 848 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 FOXP1Q9H334 677 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 ATP8A2Q9NTI2 1148 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 ORC4O43929 436 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 ADRA2BP18089 450 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 PRDX5P30044 214 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 CDC25BP30305 580 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 GRAPQ13588 217 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 SPTY2D1Q68D10 685 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 GRAPLQ8TC17 118 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 NUP133Q8WUM0 1156 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 RNF26Q9BY78 433 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 KCNF1Q9H3M0 494 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 ANO8Q9HCE9 1232 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 DCP1AQ9NPI6 582 aaPredicted RBP13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
SLC28A1-204ENST00000538177 MROH7-TTC4A0A0A0MT08 1334 aa13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 BTBD18B2RXH4 712 aa13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 CUTAO60888 179 aa13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 SLC3A2P08195 630 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 RBM6P78332 1123 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 CHAF1AQ13111 956 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 NOLC1Q14978 699 aaKnown RBP eCLIP13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 SHC4Q6S5L8 630 aa13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 IQCA1Q86XH1 822 aa13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 DIS3L2Q8IYB7 885 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 BCL11BQ9C0K0 894 aaPredicted RBP13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 NAT10Q9H0A0 1025 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 SPTLC3Q9NUV7 552 aa13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 SBF2Q86WG5 1849 aa13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 BAZ2AQ9UIF9 1905 aaKnown RBP13.19□□□□□ -0.3
SLC28A1-204ENST00000538177 NPHP1O15259 732 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 TPM2P07951 284 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 FUT2Q10981 343 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 RESP18Q5W5W9 173 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 AATFQ9NY61 560 aaKnown RBP eCLIP13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 TNRC6CQ9HCJ0 1690 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 BECN2A8MW95 431 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 SYKP43405 635 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 TOB1P50616 345 aaPredicted RBP13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 IFIT1BQ5T764 474 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 C15orf52Q6ZUT6 534 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 CATIPQ7Z7H3 387 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 CMTR1Q8N1G2 835 aaKnown RBP13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 CCDC82Q8N4S0 544 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 KIAA1524Q8TCG1 905 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 BPIFA3Q9BQP9 254 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 MYH2Q9UKX2 1941 aa13.18□□□□□ -0.3
SLC28A1-204ENST00000538177 MYH13Q9UKX3 1938 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 A0A087WWV3 80 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 PRPF3O43395 683 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 PRDM1O75626 825 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 DDAH1O94760 285 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 CALM1P0DP23 149 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 CALM2P0DP24 149 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 CALM3P0DP25 149 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 TROAPQ12815 778 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 RILPL1Q5EBL4 403 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 WDR66Q8TBY9 1149 aa13.17□□□□□ -0.3
SLC28A1-204ENST00000538177 MRFAP1L1Q96HT8 127 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms